Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-SR6/-
Location 2188114..2188443 Replicon chromosome
Accession NZ_AP024623
Organism Bacillus subtilis strain BEST3102

Toxin (Protein)


Gene name yonT Uniprot ID C0H439
Locus tag K6J99_RS11215 Protein ID WP_010886546.1
Coordinates 2188114..2188365 (-) Length 84 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 2188343..2188443 (+)

Genomic Context

------K6J99_RS11235K6J99_RS11190K6J99_RS11195K6J99_RS11200K6J99_RS11205K6J99_RS11210K6J99_RS11215K6J99_RS11220K6J99_RS11225K6J99_RS11230
Location: 2188343..2188443 (101 bp)
Type: Antitoxin
Protein ID: -
Location: 2188501..2188601 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2188501..2188601 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2188501..2188601 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2188501..2188601 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2190940..2191134 (195 bp)
Type: Others
Protein ID: WP_004399291.1
Location: 2183572..2183799 (228 bp)
Type: Others
Protein ID: WP_004399298.1
Location: 2184060..2185376 (1317 bp)
Type: Others
Protein ID: WP_004399369.1
Location: 2185733..2186239 (507 bp)
Type: Others
Protein ID: WP_004399486.1
Location: 2186567..2187799 (1233 bp)
Type: Others
Protein ID: WP_004399445.1
Location: 2187881..2188069 (189 bp)
Type: Others
Protein ID: WP_004399547.1
Location: 2188114..2188365 (252 bp)
Type: Toxin
Protein ID: WP_010886546.1
Location: 2188384..2188560 (177 bp)
Type: Others
Protein ID: WP_009967515.1
Location: 2188935..2189546 (612 bp)
Type: Others
Protein ID: WP_009967516.1
Location: 2189661..2189987 (327 bp)
Type: Others
Protein ID: WP_009967517.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
K6J99_RS111902183572..2183799-228WP_004399298.1helix-turn-helix transcriptional regulator-
K6J99_RS111952184060..2185376-1317WP_004399369.1hypothetical protein-
K6J99_RS112002185733..2186239-507WP_004399486.1hypothetical protein-
K6J99_RS112052186567..2187799-1233WP_004399445.1hypothetical protein-
K6J99_RS112102187881..2188069-189WP_004399547.1hypothetical protein-
K6J99_RS112152188114..2188365-252WP_010886546.1hypothetical proteinToxin
-2188343..2188443+101--Antitoxin
K6J99_RS112202188384..2188560-177WP_009967515.1hypothetical protein-
-2188501..2188601+101NuclAT_2--
-2188501..2188601+101NuclAT_2--
-2188501..2188601+101NuclAT_2--
-2188501..2188601+101NuclAT_2--
K6J99_RS112252188935..2189546-612WP_009967516.1lipoprotein-
K6J99_RS112302189661..2189987-327WP_009967517.1helix-turn-helix transcriptional regulator-
K6J99_RS112352190940..2191134+195WP_004399291.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
insideProphage--2120228..2255008134780


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 84 a.a.        Molecular weight: 9956.96 Da        Isoelectric Point: 9.7930

>T39012 WP_010886546.1 NZ_AP024623:c2188365-2188114 [Bacillus subtilis]
MNFSFSSYPYYNMIKHIANMKRFSLWFTHITFIGLFLMFQLIKDYFSSEGQALINTIFVVTCIIAILLWIIYCVFLKLRN
KSH

Download         Length: 252 bp

>T39012 NZ_AP024623:c2188365-2188114 [Bacillus subtilis]
ATGAACTTCTCCTTTAGTTCCTACCCATATTATAACATGATCAAGCACATTGCAAACATGAAACGATTCTCATTATGGTT
TACCCATATCACATTCATTGGCTTATTCTTAATGTTTCAACTCATCAAAGATTACTTCAGCAGCGAAGGACAGGCGCTAA
TCAACACAATTTTTGTTGTCACATGTATCATTGCCATATTGTTATGGATCATCTATTGTGTATTCCTTAAACTAAGAAAC
AAGTCACACTAA

Antitoxin


Download         Length: 101 bp

>AT39012 NZ_AP024623:2188343-2188443 [Bacillus subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBC0H439

Antitoxin

Download structure file

References