Detailed information of TA system
Overview
TA module
Type | I | Classification (family/domain) | bsrG-as-bsrH/- |
Location | 2252762..2253052 | Replicon | chromosome |
Accession | NZ_AP024622 | ||
Organism | Bacillus subtilis strain BEST3096 |
Toxin (Protein)
Gene name | bsrG | Uniprot ID | L8EAY0 |
Locus tag | K6K01_RS11565 | Protein ID | WP_009967548.1 |
Coordinates | 2252762..2252878 (+) | Length | 39 a.a. |
Antitoxin (RNA)
Gene name | as-bsrH | ||
Locus tag | - | ||
Coordinates | 2252873..2253052 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
K6K01_RS11530 (2248689) | 2248689..2248859 | - | 171 | WP_009967544.1 | bacteriocin sublancin-168 | - |
K6K01_RS11535 (2249156) | 2249156..2249473 | - | 318 | WP_009967545.1 | sublancin immunity protein SunI | - |
K6K01_RS11540 (2249575) | 2249575..2250825 | - | 1251 | WP_004398504.1 | UV-damage repair protein uvrX | - |
K6K01_RS11545 (2250818) | 2250818..2251150 | - | 333 | WP_004398710.1 | YolD-like family protein | - |
K6K01_RS11550 (2251324) | 2251324..2251659 | + | 336 | WP_004399073.1 | hypothetical protein | - |
K6K01_RS11555 (2251702) | 2251702..2252058 | - | 357 | WP_004398595.1 | hypothetical protein | - |
K6K01_RS11560 (2252064) | 2252064..2252531 | - | 468 | WP_003246138.1 | YolA family protein | - |
K6K01_RS11565 (2252762) | 2252762..2252878 | + | 117 | WP_009967548.1 | type I toxin-antitoxin system toxin BsrG | Toxin |
- (2252873) | 2252873..2253052 | - | 180 | NuclAT_1 | - | Antitoxin |
- (2252873) | 2252873..2253052 | - | 180 | NuclAT_1 | - | Antitoxin |
- (2252873) | 2252873..2253052 | - | 180 | NuclAT_1 | - | Antitoxin |
- (2252873) | 2252873..2253052 | - | 180 | NuclAT_1 | - | Antitoxin |
K6K01_RS11570 (2253157) | 2253157..2253690 | - | 534 | WP_004399156.1 | GNAT family protein | - |
K6K01_RS11575 (2253726) | 2253726..2254304 | - | 579 | WP_004399123.1 | SMI1/KNR4 family protein | - |
K6K01_RS11580 (2254368) | 2254368..2254865 | - | 498 | WP_003246188.1 | SMI1/KNR4 family protein | - |
K6K01_RS11585 (2254874) | 2254874..2256589 | - | 1716 | WP_004398855.1 | ribonuclease YeeF family protein | - |
K6K01_RS11590 (2256689) | 2256689..2257246 | - | 558 | WP_003246042.1 | SMI1/KNR4 family protein | - |
K6K01_RS11595 (2257381) | 2257381..2257515 | + | 135 | WP_234047931.1 | transposase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
inside | Prophage | - | - | 2130796..2265576 | 134780 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 39 a.a. Molecular weight: 4336.39 Da Isoelectric Point: 10.1022
>T38999 WP_009967548.1 NZ_AP024622:2252762-2252878 [Bacillus subtilis]
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
Download Length: 117 bp
>T38999 NZ_AP024622:2252762-2252878 [Bacillus subtilis]
ATGACTGTTTACGAATCATTAATGATAATGATCAATTTTGGCGGATTGATATTAAATACCGTCTTGTTGATCTTCAATAT
AATGATGATTGTAACGTCAAGCCAAAAGAAAAAATAG
ATGACTGTTTACGAATCATTAATGATAATGATCAATTTTGGCGGATTGATATTAAATACCGTCTTGTTGATCTTCAATAT
AATGATGATTGTAACGTCAAGCCAAAAGAAAAAATAG
Antitoxin
Download Length: 180 bp
>AT38999 NZ_AP024622:c2253052-2252873 [Bacillus subtilis]
AATGATACAATTATATAATTATTTTTTGCATTTTGTTTAATTAAATGCATAAAATAAAAAGACCAGGGTGTTGGTAGCAC
CCTGGCTCTGTACAAAAGCTGCCCATCAAAGGGCTTGCTCGTTGTCAAATCTGCGTAGGCCTAACCCTTCAGGTGTCCAA
ACTCAAGGGAAGGTCTATTT
AATGATACAATTATATAATTATTTTTTGCATTTTGTTTAATTAAATGCATAAAATAAAAAGACCAGGGTGTTGGTAGCAC
CCTGGCTCTGTACAAAAGCTGCCCATCAAAGGGCTTGCTCGTTGTCAAATCTGCGTAGGCCTAACCCTTCAGGTGTCCAA
ACTCAAGGGAAGGTCTATTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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