Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | yonT-as-bsrG/- |
Location | 2198952..2199169 | Replicon | chromosome |
Accession | NZ_AP024622 | ||
Organism | Bacillus subtilis strain BEST3096 |
Toxin (Protein)
Gene name | yonT | Uniprot ID | O31941 |
Locus tag | K6K01_RS11270 | Protein ID | WP_009967515.1 |
Coordinates | 2198952..2199128 (-) | Length | 59 a.a. |
Antitoxin (RNA)
Gene name | as-bsrG | ||
Locus tag | - | ||
Coordinates | 2199069..2199169 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
K6K01_RS11240 (2194140) | 2194140..2194367 | - | 228 | WP_004399298.1 | helix-turn-helix transcriptional regulator | - |
K6K01_RS11245 (2194628) | 2194628..2195944 | - | 1317 | WP_004399369.1 | hypothetical protein | - |
K6K01_RS11250 (2196301) | 2196301..2196807 | - | 507 | WP_004399486.1 | hypothetical protein | - |
K6K01_RS11255 (2197135) | 2197135..2198367 | - | 1233 | WP_004399445.1 | hypothetical protein | - |
K6K01_RS11260 (2198449) | 2198449..2198637 | - | 189 | WP_004399547.1 | hypothetical protein | - |
K6K01_RS11265 (2198682) | 2198682..2198933 | - | 252 | WP_010886546.1 | hypothetical protein | - |
K6K01_RS11270 (2198952) | 2198952..2199128 | - | 177 | WP_009967515.1 | hypothetical protein | Toxin |
- (2199069) | 2199069..2199169 | + | 101 | NuclAT_2 | - | Antitoxin |
- (2199069) | 2199069..2199169 | + | 101 | NuclAT_2 | - | Antitoxin |
- (2199069) | 2199069..2199169 | + | 101 | NuclAT_2 | - | Antitoxin |
- (2199069) | 2199069..2199169 | + | 101 | NuclAT_2 | - | Antitoxin |
K6K01_RS11275 (2199503) | 2199503..2200114 | - | 612 | WP_009967516.1 | lipoprotein | - |
K6K01_RS11280 (2200229) | 2200229..2200555 | - | 327 | WP_009967517.1 | helix-turn-helix transcriptional regulator | - |
K6K01_RS11285 (2201508) | 2201508..2201702 | + | 195 | WP_004399291.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
inside | Prophage | - | - | 2130796..2265576 | 134780 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 59 a.a. Molecular weight: 6882.45 Da Isoelectric Point: 12.8833
>T38995 WP_009967515.1 NZ_AP024622:c2199128-2198952 [Bacillus subtilis]
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
Download Length: 177 bp
>T38995 NZ_AP024622:c2199128-2198952 [Bacillus subtilis]
GTGCTTGAGAAAATGGGTATCGTAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGGTAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA
GTGCTTGAGAAAATGGGTATCGTAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGGTAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA
Antitoxin
Download Length: 101 bp
>AT38995 NZ_AP024622:2199069-2199169 [Bacillus subtilis]
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTACGATACCCATTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTACGATACCCATTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|