Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-SR6/-
Location 2198815..2199144 Replicon chromosome
Accession NZ_AP024621
Organism Bacillus subtilis strain BEST3095

Toxin (Protein)


Gene name yonT Uniprot ID C0H439
Locus tag K6J89_RS11285 Protein ID WP_010886546.1
Coordinates 2198815..2199066 (-) Length 84 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 2199044..2199144 (+)

Genomic Context

------K6J89_RS11305K6J89_RS11260K6J89_RS11265K6J89_RS11270K6J89_RS11275K6J89_RS11280K6J89_RS11285K6J89_RS11290K6J89_RS11295K6J89_RS11300
Location: 2199044..2199144 (101 bp)
Type: Antitoxin
Protein ID: -
Location: 2199202..2199302 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2199202..2199302 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2199202..2199302 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2199202..2199302 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2201641..2201835 (195 bp)
Type: Others
Protein ID: WP_004399291.1
Location: 2194273..2194500 (228 bp)
Type: Others
Protein ID: WP_004399298.1
Location: 2194761..2196077 (1317 bp)
Type: Others
Protein ID: WP_004399369.1
Location: 2196434..2196940 (507 bp)
Type: Others
Protein ID: WP_004399486.1
Location: 2197268..2198500 (1233 bp)
Type: Others
Protein ID: WP_004399445.1
Location: 2198582..2198770 (189 bp)
Type: Others
Protein ID: WP_004399547.1
Location: 2198815..2199066 (252 bp)
Type: Toxin
Protein ID: WP_010886546.1
Location: 2199085..2199261 (177 bp)
Type: Others
Protein ID: WP_009967515.1
Location: 2199636..2200247 (612 bp)
Type: Others
Protein ID: WP_009967516.1
Location: 2200362..2200688 (327 bp)
Type: Others
Protein ID: WP_009967517.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
K6J89_RS112602194273..2194500-228WP_004399298.1helix-turn-helix transcriptional regulator-
K6J89_RS112652194761..2196077-1317WP_004399369.1hypothetical protein-
K6J89_RS112702196434..2196940-507WP_004399486.1hypothetical protein-
K6J89_RS112752197268..2198500-1233WP_004399445.1hypothetical protein-
K6J89_RS112802198582..2198770-189WP_004399547.1hypothetical protein-
K6J89_RS112852198815..2199066-252WP_010886546.1hypothetical proteinToxin
-2199044..2199144+101--Antitoxin
K6J89_RS112902199085..2199261-177WP_009967515.1hypothetical protein-
-2199202..2199302+101NuclAT_2--
-2199202..2199302+101NuclAT_2--
-2199202..2199302+101NuclAT_2--
-2199202..2199302+101NuclAT_2--
K6J89_RS112952199636..2200247-612WP_009967516.1lipoprotein-
K6J89_RS113002200362..2200688-327WP_009967517.1helix-turn-helix transcriptional regulator-
K6J89_RS113052201641..2201835+195WP_004399291.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
insideProphage--2130929..2265709134780


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 84 a.a.        Molecular weight: 9956.96 Da        Isoelectric Point: 9.7930

>T38966 WP_010886546.1 NZ_AP024621:c2199066-2198815 [Bacillus subtilis]
MNFSFSSYPYYNMIKHIANMKRFSLWFTHITFIGLFLMFQLIKDYFSSEGQALINTIFVVTCIIAILLWIIYCVFLKLRN
KSH

Download         Length: 252 bp

>T38966 NZ_AP024621:c2199066-2198815 [Bacillus subtilis]
ATGAACTTCTCCTTTAGTTCCTACCCATATTATAACATGATCAAGCACATTGCAAACATGAAACGATTCTCATTATGGTT
TACCCATATCACATTCATTGGCTTATTCTTAATGTTTCAACTCATCAAAGATTACTTCAGCAGCGAAGGACAGGCGCTAA
TCAACACAATTTTTGTTGTCACATGTATCATTGCCATATTGTTATGGATCATCTATTGTGTATTCCTTAAACTAAGAAAC
AAGTCACACTAA

Antitoxin


Download         Length: 101 bp

>AT38966 NZ_AP024621:2199044-2199144 [Bacillus subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBC0H439

Antitoxin

Download structure file

References