Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-as-bsrG/-
Location 2215015..2215232 Replicon chromosome
Accession NZ_AP019714
Organism Bacillus subtilis subsp. subtilis strain NBRC 13719

Toxin (Protein)


Gene name yonT Uniprot ID O31941
Locus tag FNP71_RS11540 Protein ID WP_009967515.1
Coordinates 2215015..2215191 (-) Length 59 a.a.

Antitoxin (RNA)


Gene name as-bsrG
Locus tag -
Coordinates 2215132..2215232 (+)

Genomic Context

-----FNP71_RS11555FNP71_RS11510FNP71_RS11515FNP71_RS11520FNP71_RS11525FNP71_RS11530FNP71_RS11535FNP71_RS11540FNP71_RS11545FNP71_RS11550
Location: 2215132..2215232 (101 bp)
Type: Antitoxin
Protein ID: NuclAT_2
Location: 2215132..2215232 (101 bp)
Type: Antitoxin
Protein ID: NuclAT_2
Location: 2215132..2215232 (101 bp)
Type: Antitoxin
Protein ID: NuclAT_2
Location: 2215132..2215232 (101 bp)
Type: Antitoxin
Protein ID: NuclAT_2
Location: 2217571..2217765 (195 bp)
Type: Others
Protein ID: WP_004399291.1
Location: 2210203..2210430 (228 bp)
Type: Others
Protein ID: WP_004399298.1
Location: 2210691..2212007 (1317 bp)
Type: Others
Protein ID: WP_004399369.1
Location: 2212364..2212870 (507 bp)
Type: Others
Protein ID: WP_004399486.1
Location: 2213198..2214430 (1233 bp)
Type: Others
Protein ID: WP_004399445.1
Location: 2214512..2214700 (189 bp)
Type: Others
Protein ID: WP_004399547.1
Location: 2214745..2214996 (252 bp)
Type: Others
Protein ID: WP_010886546.1
Location: 2215015..2215191 (177 bp)
Type: Toxin
Protein ID: WP_009967515.1
Location: 2215566..2216177 (612 bp)
Type: Others
Protein ID: WP_009967516.1
Location: 2216292..2216618 (327 bp)
Type: Others
Protein ID: WP_009967517.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
FNP71_RS115102210203..2210430-228WP_004399298.1helix-turn-helix transcriptional regulator-
FNP71_RS115152210691..2212007-1317WP_004399369.1hypothetical protein-
FNP71_RS115202212364..2212870-507WP_004399486.1hypothetical protein-
FNP71_RS115252213198..2214430-1233WP_004399445.1hypothetical protein-
FNP71_RS115302214512..2214700-189WP_004399547.1hypothetical protein-
FNP71_RS115352214745..2214996-252WP_010886546.1hypothetical protein-
FNP71_RS115402215015..2215191-177WP_009967515.1hypothetical proteinToxin
-2215132..2215232+101NuclAT_2-Antitoxin
-2215132..2215232+101NuclAT_2-Antitoxin
-2215132..2215232+101NuclAT_2-Antitoxin
-2215132..2215232+101NuclAT_2-Antitoxin
FNP71_RS115452215566..2216177-612WP_009967516.1lipoprotein-
FNP71_RS115502216292..2216618-327WP_009967517.1helix-turn-helix domain-containing protein-
FNP71_RS115552217571..2217765+195WP_004399291.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
insideProphage--2146857..2295886149029


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Type I toxin-antitoxin system, toxin Ldr

(1-35)


Sequences

Toxin        


Download         Length: 59 a.a.        Molecular weight: 6882.45 Da        Isoelectric Point: 12.8833

>T32940 WP_009967515.1 NZ_AP019714:c2215191-2215015 [Bacillus subtilis subsp. subtilis]
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Download         Length: 177 bp

>T32940 NZ_AP019714:c2215191-2215015 [Bacillus subtilis subsp. subtilis]
GTGCTTGAGAAAATGGGTATCGTAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGGTAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA

Antitoxin


Download         Length: 101 bp

>AT32940 NZ_AP019714:2215132-2215232 [Bacillus subtilis subsp. subtilis]
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTACGATACCCATTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBO31941

Antitoxin

Download structure file

References