Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-SR6/-
Location 2237755..2237972 Replicon chromosome
Accession NZ_LN680001
Organism Bacillus subtilis strain BS34A

Toxin (Protein)


Gene name yonT Uniprot ID O31941
Locus tag VV28_RS21750 Protein ID WP_009967515.1
Coordinates 2237796..2237972 (-) Length 59 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 2237755..2237855 (+)

Genomic Context

------VV28_RS11025VV28_RS10990VV28_RS10995VV28_RS11000VV28_RS11005VV28_RS11010VV28_RS21745VV28_RS21750VV28_RS11015VV28_RS11020
Location: 2237755..2237855 (101 bp)
Type: Antitoxin
Protein ID: -
Location: 2237913..2238013 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2237913..2238013 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2237913..2238013 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2237913..2238013 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2240352..2240546 (195 bp)
Type: Others
Protein ID: WP_004399291.1
Location: 2232984..2233211 (228 bp)
Type: Others
Protein ID: WP_004399298.1
Location: 2233472..2234788 (1317 bp)
Type: Others
Protein ID: WP_004399369.1
Location: 2235145..2235651 (507 bp)
Type: Others
Protein ID: WP_004399486.1
Location: 2235979..2237211 (1233 bp)
Type: Others
Protein ID: WP_004399445.1
Location: 2237293..2237481 (189 bp)
Type: Others
Protein ID: WP_004399547.1
Location: 2237526..2237777 (252 bp)
Type: Others
Protein ID: WP_010886546.1
Location: 2237796..2237972 (177 bp)
Type: Toxin
Protein ID: WP_009967515.1
Location: 2238347..2238958 (612 bp)
Type: Others
Protein ID: WP_009967516.1
Location: 2239073..2239399 (327 bp)
Type: Others
Protein ID: WP_009967517.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
VV28_RS109902232984..2233211-228WP_004399298.1helix-turn-helix transcriptional regulator-
VV28_RS109952233472..2234788-1317WP_004399369.1hypothetical protein-
VV28_RS110002235145..2235651-507WP_004399486.1hypothetical protein-
VV28_RS110052235979..2237211-1233WP_004399445.1hypothetical protein-
VV28_RS110102237293..2237481-189WP_004399547.1hypothetical protein-
VV28_RS217452237526..2237777-252WP_010886546.1hypothetical protein-
-2237755..2237855+101--Antitoxin
VV28_RS217502237796..2237972-177WP_009967515.1hypothetical proteinToxin
-2237913..2238013+101NuclAT_2--
-2237913..2238013+101NuclAT_2--
-2237913..2238013+101NuclAT_2--
-2237913..2238013+101NuclAT_2--
VV28_RS110152238347..2238958-612WP_009967516.1lipoprotein-
VV28_RS110202239073..2239399-327WP_009967517.1helix-turn-helix domain-containing protein-
VV28_RS110252240352..2240546+195WP_004399291.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
insideProphage--2169640..2305065135425
insideProphage--2169640..2304420134780


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 59 a.a.        Molecular weight: 6882.45 Da        Isoelectric Point: 12.8833

>T285528 WP_009967515.1 NZ_LN680001:c2237972-2237796 [Bacillus subtilis]
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Download         Length: 177 bp

Antitoxin


Download         Length: 101 bp

>AT285528 NZ_LN680001:2237755-2237855 [Bacillus subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBO31941

Antitoxin

Download structure file

References