Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | bsrG-as-bsrH/- |
Location | 2291604..2291894 | Replicon | chromosome |
Accession | NZ_LN649259 | ||
Organism | Bacillus subtilis strain BS49 |
Toxin (Protein)
Gene name | bsrG | Uniprot ID | L8EAY0 |
Locus tag | VV34_RS23645 | Protein ID | WP_009967548.1 |
Coordinates | 2291604..2291720 (+) | Length | 39 a.a. |
Antitoxin (RNA)
Gene name | as-bsrH | ||
Locus tag | - | ||
Coordinates | 2291715..2291894 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
VV34_RS11865 | 2287531..2287701 | - | 171 | WP_009967544.1 | bacteriocin sublancin-168 | - |
VV34_RS11870 | 2287998..2288315 | - | 318 | WP_009967545.1 | sublancin immunity protein SunI | - |
VV34_RS11875 | 2288417..2289667 | - | 1251 | WP_004398504.1 | UV-damage repair protein uvrX | - |
VV34_RS11880 | 2289660..2289992 | - | 333 | WP_004398710.1 | YolD-like family protein | - |
VV34_RS11885 | 2290166..2290501 | + | 336 | WP_004399073.1 | hypothetical protein | - |
VV34_RS11890 | 2290544..2290900 | - | 357 | WP_004398595.1 | hypothetical protein | - |
VV34_RS11895 | 2290906..2291373 | - | 468 | WP_003246138.1 | YolA family protein | - |
VV34_RS23645 | 2291604..2291720 | + | 117 | WP_009967548.1 | type I toxin-antitoxin system toxin BsrG | Toxin |
- | 2291715..2291894 | - | 180 | NuclAT_1 | - | Antitoxin |
- | 2291715..2291894 | - | 180 | NuclAT_1 | - | Antitoxin |
- | 2291715..2291894 | - | 180 | NuclAT_1 | - | Antitoxin |
- | 2291715..2291894 | - | 180 | NuclAT_1 | - | Antitoxin |
VV34_RS11905 | 2291999..2292532 | - | 534 | WP_004399156.1 | GNAT family N-acetyltransferase | - |
VV34_RS11910 | 2292568..2293146 | - | 579 | WP_004399123.1 | SMI1/KNR4 family protein | - |
VV34_RS11915 | 2293210..2293707 | - | 498 | WP_003246188.1 | SMI1/KNR4 family protein | - |
VV34_RS11920 | 2293716..2295431 | - | 1716 | WP_004398855.1 | ribonuclease YeeF family protein | - |
VV34_RS11925 | 2295531..2296088 | - | 558 | WP_003246042.1 | SMI1/KNR4 family protein | - |
VV34_RS22950 | 2296157..2296357 | + | 201 | WP_161793078.1 | transposase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
inside | Prophage | - | - | 2169638..2304418 | 134780 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 39 a.a. Molecular weight: 4336.39 Da Isoelectric Point: 10.1022
>T285513 WP_009967548.1 NZ_LN649259:2291604-2291720 [Bacillus subtilis]
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
Download Length: 117 bp
Antitoxin
Download Length: 180 bp
>AT285513 NZ_LN649259:c2291894-2291715 [Bacillus subtilis]
AATGATACAATTATATAATTATTTTTTGCATTTTGTTTAATTAAATGCATAAAATAAAAAGACCAGGGTGTTGGTAGCAC
CCTGGCTCTGTACAAAAGCTGCCCATCAAAGGGCTTGCTCGTTGTCAAATCTGCGTAGGCCTAACCCTTCAGGTGTCCAA
ACTCAAGGGAAGGTCTATTT
AATGATACAATTATATAATTATTTTTTGCATTTTGTTTAATTAAATGCATAAAATAAAAAGACCAGGGTGTTGGTAGCAC
CCTGGCTCTGTACAAAAGCTGCCCATCAAAGGGCTTGCTCGTTGTCAAATCTGCGTAGGCCTAACCCTTCAGGTGTCCAA
ACTCAAGGGAAGGTCTATTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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