Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-as-bsrG/-
Location 2237794..2238011 Replicon chromosome
Accession NZ_LN649259
Organism Bacillus subtilis strain BS49

Toxin (Protein)


Gene name yonT Uniprot ID O31941
Locus tag VV34_RS22940 Protein ID WP_009967515.1
Coordinates 2237794..2237970 (-) Length 59 a.a.

Antitoxin (RNA)


Gene name as-bsrG
Locus tag -
Coordinates 2237911..2238011 (+)

Genomic Context

-----VV34_RS11625VV34_RS11585VV34_RS11590VV34_RS11595VV34_RS11600VV34_RS11605VV34_RS22935VV34_RS22940VV34_RS11615VV34_RS11620
Location: 2237911..2238011 (101 bp)
Type: Antitoxin
Protein ID: NuclAT_2
Location: 2237911..2238011 (101 bp)
Type: Antitoxin
Protein ID: NuclAT_2
Location: 2237911..2238011 (101 bp)
Type: Antitoxin
Protein ID: NuclAT_2
Location: 2237911..2238011 (101 bp)
Type: Antitoxin
Protein ID: NuclAT_2
Location: 2240350..2240544 (195 bp)
Type: Others
Protein ID: WP_004399291.1
Location: 2232982..2233209 (228 bp)
Type: Others
Protein ID: WP_004399298.1
Location: 2233470..2234786 (1317 bp)
Type: Others
Protein ID: WP_004399369.1
Location: 2235143..2235649 (507 bp)
Type: Others
Protein ID: WP_004399486.1
Location: 2235977..2237209 (1233 bp)
Type: Others
Protein ID: WP_004399445.1
Location: 2237291..2237479 (189 bp)
Type: Others
Protein ID: WP_004399547.1
Location: 2237524..2237775 (252 bp)
Type: Others
Protein ID: WP_010886546.1
Location: 2237794..2237970 (177 bp)
Type: Toxin
Protein ID: WP_009967515.1
Location: 2238345..2238956 (612 bp)
Type: Others
Protein ID: WP_009967516.1
Location: 2239071..2239397 (327 bp)
Type: Others
Protein ID: WP_009967517.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
VV34_RS115852232982..2233209-228WP_004399298.1helix-turn-helix transcriptional regulator-
VV34_RS115902233470..2234786-1317WP_004399369.1hypothetical protein-
VV34_RS115952235143..2235649-507WP_004399486.1hypothetical protein-
VV34_RS116002235977..2237209-1233WP_004399445.1hypothetical protein-
VV34_RS116052237291..2237479-189WP_004399547.1hypothetical protein-
VV34_RS229352237524..2237775-252WP_010886546.1hypothetical protein-
VV34_RS229402237794..2237970-177WP_009967515.1hypothetical proteinToxin
-2237911..2238011+101NuclAT_2-Antitoxin
-2237911..2238011+101NuclAT_2-Antitoxin
-2237911..2238011+101NuclAT_2-Antitoxin
-2237911..2238011+101NuclAT_2-Antitoxin
VV34_RS116152238345..2238956-612WP_009967516.1lipoprotein-
VV34_RS116202239071..2239397-327WP_009967517.1helix-turn-helix domain-containing protein-
VV34_RS116252240350..2240544+195WP_004399291.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
insideProphage--2169638..2304418134780


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 59 a.a.        Molecular weight: 6882.45 Da        Isoelectric Point: 12.8833

>T285509 WP_009967515.1 NZ_LN649259:c2237970-2237794 [Bacillus subtilis]
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Download         Length: 177 bp

Antitoxin


Download         Length: 101 bp

>AT285509 NZ_LN649259:2237911-2238011 [Bacillus subtilis]
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTACGATACCCATTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBO31941

Antitoxin

Download structure file

References