Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-SR6/-
Location 2219354..2219571 Replicon chromosome
Accession NZ_CP125660
Organism Bacillus subtilis strain GUCC48

Toxin (Protein)


Gene name yonT Uniprot ID O31941
Locus tag QLH41_RS11445 Protein ID WP_009967515.1
Coordinates 2219395..2219571 (-) Length 59 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 2219354..2219454 (+)

Genomic Context

------QLH41_RS11460QLH41_RS11415QLH41_RS11420QLH41_RS11425QLH41_RS11430QLH41_RS11435QLH41_RS11440QLH41_RS11445QLH41_RS11450QLH41_RS11455
Location: 2219354..2219454 (101 bp)
Type: Antitoxin
Protein ID: -
Location: 2219512..2219612 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2219512..2219612 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2219512..2219612 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2219512..2219612 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2221951..2222145 (195 bp)
Type: Others
Protein ID: WP_004399291.1
Location: 2214583..2214810 (228 bp)
Type: Others
Protein ID: WP_004399298.1
Location: 2215071..2216387 (1317 bp)
Type: Others
Protein ID: WP_004399369.1
Location: 2216744..2217250 (507 bp)
Type: Others
Protein ID: WP_004399486.1
Location: 2217578..2218810 (1233 bp)
Type: Others
Protein ID: WP_004399445.1
Location: 2218892..2219080 (189 bp)
Type: Others
Protein ID: WP_004399547.1
Location: 2219125..2219376 (252 bp)
Type: Others
Protein ID: WP_010886546.1
Location: 2219395..2219571 (177 bp)
Type: Toxin
Protein ID: WP_009967515.1
Location: 2219946..2220557 (612 bp)
Type: Others
Protein ID: WP_009967516.1
Location: 2220672..2220998 (327 bp)
Type: Others
Protein ID: WP_009967517.1
ToxinAntitoxinOther genes
Loading, please wait
Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
QLH41_RS114152214583..2214810-228WP_004399298.1helix-turn-helix transcriptional regulator-
QLH41_RS114202215071..2216387-1317WP_004399369.1hypothetical protein-
QLH41_RS114252216744..2217250-507WP_004399486.1hypothetical protein-
QLH41_RS114302217578..2218810-1233WP_004399445.1hypothetical protein-
QLH41_RS114352218892..2219080-189WP_004399547.1hypothetical protein-
QLH41_RS114402219125..2219376-252WP_010886546.1hypothetical protein-
-2219354..2219454+101--Antitoxin
QLH41_RS114452219395..2219571-177WP_009967515.1hypothetical proteinToxin
-2219512..2219612+101NuclAT_2--
-2219512..2219612+101NuclAT_2--
-2219512..2219612+101NuclAT_2--
-2219512..2219612+101NuclAT_2--
QLH41_RS114502219946..2220557-612WP_009967516.1lipoprotein-
QLH41_RS114552220672..2220998-327WP_009967517.1helix-turn-helix transcriptional regulator-
QLH41_RS114602221951..2222145+195WP_004399291.1hypothetical protein-

Associated MGEs

Loading, please wait
MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
insideProphage--2151237..2286019134782


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 59 a.a.        Molecular weight: 6882.45 Da        Isoelectric Point: 12.8833

>T282256 WP_009967515.1 NZ_CP125660:c2219571-2219395 [Bacillus subtilis]
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Download         Length: 177 bp

Antitoxin


Download         Length: 101 bp

>AT282256 NZ_CP125660:2219354-2219454 [Bacillus subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

Loading, please wait
Source
ID
Structure
AlphaFold DBO31941

Antitoxin

Download structure file

References