Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | yonT-as-bsrG/- |
Location | 2936299..2936516 | Replicon | chromosome |
Accession | NZ_CP120613 | ||
Organism | Bacillus subtilis strain DSM 23521 |
Toxin (Protein)
Gene name | yonT | Uniprot ID | O31941 |
Locus tag | P5649_RS15510 | Protein ID | WP_009967515.1 |
Coordinates | 2936340..2936516 (+) | Length | 59 a.a. |
Antitoxin (RNA)
Gene name | as-bsrG | ||
Locus tag | - | ||
Coordinates | 2936299..2936399 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
P5649_RS15495 (2933767) | 2933767..2933961 | - | 195 | WP_004399291.1 | hypothetical protein | - |
P5649_RS15500 (2934913) | 2934913..2935239 | + | 327 | WP_009967517.1 | helix-turn-helix transcriptional regulator | - |
P5649_RS15505 (2935354) | 2935354..2935965 | + | 612 | WP_009967516.1 | lipoprotein | - |
- (2936299) | 2936299..2936399 | - | 101 | NuclAT_2 | - | Antitoxin |
- (2936299) | 2936299..2936399 | - | 101 | NuclAT_2 | - | Antitoxin |
- (2936299) | 2936299..2936399 | - | 101 | NuclAT_2 | - | Antitoxin |
- (2936299) | 2936299..2936399 | - | 101 | NuclAT_2 | - | Antitoxin |
P5649_RS15510 (2936340) | 2936340..2936516 | + | 177 | WP_009967515.1 | hypothetical protein | Toxin |
P5649_RS15515 (2936535) | 2936535..2936786 | + | 252 | WP_010886546.1 | hypothetical protein | - |
P5649_RS15520 (2936831) | 2936831..2937019 | + | 189 | WP_004399547.1 | hypothetical protein | - |
P5649_RS15525 (2937101) | 2937101..2938333 | + | 1233 | WP_004399445.1 | hypothetical protein | - |
P5649_RS15530 (2938661) | 2938661..2939167 | + | 507 | WP_004399486.1 | hypothetical protein | - |
P5649_RS15535 (2939524) | 2939524..2940840 | + | 1317 | WP_004399369.1 | hypothetical protein | - |
P5649_RS15540 (2941101) | 2941101..2941328 | + | 228 | WP_004399298.1 | helix-turn-helix transcriptional regulator | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
inside | Prophage | - | - | 2855647..3004673 | 149026 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 59 a.a. Molecular weight: 6882.45 Da Isoelectric Point: 12.8833
>T275259 WP_009967515.1 NZ_CP120613:2936340-2936516 [Bacillus subtilis]
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
Download Length: 177 bp
Antitoxin
Download Length: 101 bp
>AT275259 NZ_CP120613:c2936399-2936299 [Bacillus subtilis]
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTACGATACCCATTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTACGATACCCATTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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