Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | bsrG-as-bsrH/- |
Location | 2882417..2882707 | Replicon | chromosome |
Accession | NZ_CP120613 | ||
Organism | Bacillus subtilis strain DSM 23521 |
Toxin (Protein)
Gene name | bsrG | Uniprot ID | L8EAY0 |
Locus tag | P5649_RS15215 | Protein ID | WP_009967548.1 |
Coordinates | 2882591..2882707 (-) | Length | 39 a.a. |
Antitoxin (RNA)
Gene name | as-bsrH | ||
Locus tag | - | ||
Coordinates | 2882417..2882596 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
P5649_RS15185 (2877954) | 2877954..2878088 | - | 135 | WP_234047931.1 | transposase | - |
P5649_RS15190 (2878223) | 2878223..2878780 | + | 558 | WP_003246042.1 | SMI1/KNR4 family protein | - |
P5649_RS15195 (2878880) | 2878880..2880595 | + | 1716 | WP_004398855.1 | ribonuclease YeeF family protein | - |
P5649_RS15200 (2880604) | 2880604..2881101 | + | 498 | WP_003246188.1 | SMI1/KNR4 family protein | - |
P5649_RS15205 (2881165) | 2881165..2881743 | + | 579 | WP_004399123.1 | SMI1/KNR4 family protein | - |
P5649_RS15210 (2881779) | 2881779..2882312 | + | 534 | WP_004399156.1 | GNAT family protein | - |
- (2882417) | 2882417..2882596 | + | 180 | NuclAT_1 | - | Antitoxin |
- (2882417) | 2882417..2882596 | + | 180 | NuclAT_1 | - | Antitoxin |
- (2882417) | 2882417..2882596 | + | 180 | NuclAT_1 | - | Antitoxin |
- (2882417) | 2882417..2882596 | + | 180 | NuclAT_1 | - | Antitoxin |
P5649_RS15215 (2882591) | 2882591..2882707 | - | 117 | WP_009967548.1 | type I toxin-antitoxin system toxin BsrG | Toxin |
P5649_RS15220 (2882938) | 2882938..2883405 | + | 468 | WP_003246138.1 | YolA family protein | - |
P5649_RS15225 (2883411) | 2883411..2883767 | + | 357 | WP_004398595.1 | hypothetical protein | - |
P5649_RS15230 (2883810) | 2883810..2884145 | - | 336 | WP_004399073.1 | hypothetical protein | - |
P5649_RS15235 (2884319) | 2884319..2884651 | + | 333 | WP_004398710.1 | YolD-like family protein | - |
P5649_RS15240 (2884644) | 2884644..2885894 | + | 1251 | WP_004398504.1 | UV-damage repair protein uvrX | - |
P5649_RS15245 (2885996) | 2885996..2886313 | + | 318 | WP_009967545.1 | sublancin immunity protein SunI | - |
P5649_RS15250 (2886610) | 2886610..2886780 | + | 171 | WP_009967544.1 | bacteriocin sublancin-168 | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
inside | Prophage | - | - | 2855647..3004673 | 149026 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 39 a.a. Molecular weight: 4336.39 Da Isoelectric Point: 10.1022
>T275255 WP_009967548.1 NZ_CP120613:c2882707-2882591 [Bacillus subtilis]
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
Download Length: 117 bp
Antitoxin
Download Length: 180 bp
>AT275255 NZ_CP120613:2882417-2882596 [Bacillus subtilis]
AATGATACAATTATATAATTATTTTTTGCATTTTGTTTAATTAAATGCATAAAATAAAAAGACCAGGGTGTTGGTAGCAC
CCTGGCTCTGTACAAAAGCTGCCCATCAAAGGGCTTGCTCGTTGTCAAATCTGCGTAGGCCTAACCCTTCAGGTGTCCAA
ACTCAAGGGAAGGTCTATTT
AATGATACAATTATATAATTATTTTTTGCATTTTGTTTAATTAAATGCATAAAATAAAAAGACCAGGGTGTTGGTAGCAC
CCTGGCTCTGTACAAAAGCTGCCCATCAAAGGGCTTGCTCGTTGTCAAATCTGCGTAGGCCTAACCCTTCAGGTGTCCAA
ACTCAAGGGAAGGTCTATTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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