Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-SR6/-
Location 2219202..2219419 Replicon chromosome
Accession NZ_CP103783
Organism Bacillus subtilis subsp. subtilis str. 168

Toxin (Protein)


Gene name yonT Uniprot ID O31941
Locus tag NYR92_RS11450 Protein ID WP_009967515.1
Coordinates 2219243..2219419 (-) Length 59 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 2219202..2219302 (+)

Genomic Context

------NYR92_RS11465NYR92_RS11420NYR92_RS11425NYR92_RS11430NYR92_RS11435NYR92_RS11440NYR92_RS11445NYR92_RS11450NYR92_RS11455NYR92_RS11460
Location: 2219202..2219302 (101 bp)
Type: Antitoxin
Protein ID: -
Location: 2219360..2219460 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2219360..2219460 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2219360..2219460 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2219360..2219460 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2221799..2221993 (195 bp)
Type: Others
Protein ID: WP_004399291.1
Location: 2214431..2214658 (228 bp)
Type: Others
Protein ID: WP_004399298.1
Location: 2214919..2216235 (1317 bp)
Type: Others
Protein ID: WP_004399369.1
Location: 2216592..2217098 (507 bp)
Type: Others
Protein ID: WP_004399486.1
Location: 2217426..2218658 (1233 bp)
Type: Others
Protein ID: WP_004399445.1
Location: 2218740..2218928 (189 bp)
Type: Others
Protein ID: WP_004399547.1
Location: 2218973..2219224 (252 bp)
Type: Others
Protein ID: WP_010886546.1
Location: 2219243..2219419 (177 bp)
Type: Toxin
Protein ID: WP_009967515.1
Location: 2219794..2220405 (612 bp)
Type: Others
Protein ID: WP_009967516.1
Location: 2220520..2220846 (327 bp)
Type: Others
Protein ID: WP_009967517.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
NYR92_RS114202214431..2214658-228WP_004399298.1helix-turn-helix transcriptional regulator-
NYR92_RS114252214919..2216235-1317WP_004399369.1hypothetical protein-
NYR92_RS114302216592..2217098-507WP_004399486.1hypothetical protein-
NYR92_RS114352217426..2218658-1233WP_004399445.1hypothetical protein-
NYR92_RS114402218740..2218928-189WP_004399547.1hypothetical protein-
NYR92_RS114452218973..2219224-252WP_010886546.1hypothetical protein-
-2219202..2219302+101--Antitoxin
NYR92_RS114502219243..2219419-177WP_009967515.1hypothetical proteinToxin
-2219360..2219460+101NuclAT_2--
-2219360..2219460+101NuclAT_2--
-2219360..2219460+101NuclAT_2--
-2219360..2219460+101NuclAT_2--
NYR92_RS114552219794..2220405-612WP_009967516.1lipoprotein-
NYR92_RS114602220520..2220846-327WP_009967517.1helix-turn-helix transcriptional regulator-
NYR92_RS114652221799..2221993+195WP_004399291.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
insideProphage--2151085..2311344160259
insideProphage--2151085..2285867134782


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 59 a.a.        Molecular weight: 6882.45 Da        Isoelectric Point: 12.8833

>T256650 WP_009967515.1 NZ_CP103783:c2219419-2219243 [Bacillus subtilis subsp. subtilis str. 168]
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Download         Length: 177 bp

Antitoxin


Download         Length: 101 bp

>AT256650 NZ_CP103783:2219202-2219302 [Bacillus subtilis subsp. subtilis str. 168]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBO31941

Antitoxin

Download structure file

References