252042

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) IasE-IsrA/SymE(toxin)
Location 3724585..3725017 Replicon chromosome
Accession NZ_CP101379
Organism Salmonella enterica strain SC2016290

Toxin (Protein)


Gene name IasE Uniprot ID E8XIW0
Locus tag NMU35_RS18500 Protein ID WP_000994224.1
Coordinates 3724742..3725017 (+) Length 92 a.a.

Antitoxin (RNA)


Gene name IsrA
Locus tag -
Coordinates 3724585..3725007 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NMU35_RS18470 3720803..3721540 - 738 WP_001535430.1 pili assembly chaperone SafB -
NMU35_RS18475 3721624..3722136 - 513 WP_077248260.1 pilus assembly protein -
NMU35_RS18480 3722886..3723590 - 705 Protein_3615 integrase core domain-containing protein -
NMU35_RS18485 3723643..3723891 + 249 WP_001738030.1 SymE family type I addiction module toxin -
NMU35_RS18490 3723993..3724301 - 309 WP_010988969.1 hypothetical protein -
NMU35_RS18495 3724384..3724500 - 117 WP_227457392.1 hypothetical protein -
- 3724585..3725007 - 423 - - Antitoxin
NMU35_RS18500 3724742..3725017 + 276 WP_000994224.1 SymE family type I addiction module toxin Toxin
NMU35_RS18505 3725070..3725507 - 438 WP_000943619.1 immunity 26/phosphotriesterase HocA family protein -
NMU35_RS18510 3726070..3726516 - 447 WP_000935097.1 protein SciX -
NMU35_RS18515 3726510..3727379 - 870 Protein_3622 polymorphic toxin type 47 domain-containing protein -
NMU35_RS18520 3727443..3727706 - 264 WP_000932531.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
inside Genomic island - - 3713733..3727706 13973
flank IS/Tn - - 3722886..3723167 281


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin SymE-like

(14-57)


Sequences

Toxin        


Download         Length: 92 a.a.        Molecular weight: 10032.36 Da        Isoelectric Point: 6.4704

>T252042 WP_000994224.1 NZ_CP101379:3724742-3725017 [Salmonella enterica]
MNASGVSVRHINSETCMTACYSQIPSQHLKGDWQEEAGFETGHGVTVKISEGCLILIAETDEVRDLRKELYQVKKSMKHI
KAGVNNVVNGD

Download         Length: 276 bp

Antitoxin


Download         Length: 423 bp

>AT252042 NZ_CP101379:c3725007-3724585 [Salmonella enterica]
TTCACCACATTATTTACCCCCGCCTTAATATGCTTCATCGACTTTTTCACCTGATAAAGCTCCTTCCGTAGATCCCTCAC
TTCGTCCGTCTCTGCAATCAGGATCAAACACCCCTCGGAGATCTTCACGGTGACGCCGTGCCCGGTCTCAAATCCCGCTT
CTTCCTGCCAGTCACCCTTAAGGTGCTGGCTGGGGATTTGTGAGTAACAGGCGGTCATGCAGGTTTCGCTGTTGATATGG
CGGACGCTGACGCCGGAGGCATTCATATTTGCTGACTAAATAAATTCTTATTTATCCGCCGGATGCTGGCTGATTGTGGA
GCTCAGGGTGAGTGAGTATGGGCGCGACATCCTGGCACCGCGCCTCCCTCTCCCCGGCCAGCCCCGGCCGGTGATGAGCA
GCCGGCTGCCGGGGCCGTATTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A3V2JPW5

Antitoxin

Download structure file

References