233651

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) IasE-IsrA/SymE(toxin)
Location 994660..995092 Replicon chromosome
Accession NZ_CP091547
Organism Salmonella enterica strain 1559

Toxin (Protein)


Gene name IasE Uniprot ID E8XIW0
Locus tag L4413_RS04705 Protein ID WP_000994224.1
Coordinates 994660..994935 (-) Length 92 a.a.

Antitoxin (RNA)


Gene name IsrA
Locus tag -
Coordinates 994670..995092 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
L4413_RS04685 991971..992234 + 264 WP_000932531.1 hypothetical protein -
L4413_RS04690 992298..993167 + 870 Protein_909 polymorphic toxin type 47 domain-containing protein -
L4413_RS04695 993161..993607 + 447 WP_000935097.1 protein SciX -
L4413_RS04700 994170..994607 + 438 WP_000943619.1 immunity 26/phosphotriesterase HocA family protein -
L4413_RS04705 994660..994935 - 276 WP_000994224.1 SymE family type I addiction module toxin Toxin
- 994670..995092 + 423 - - Antitoxin
L4413_RS04710 995177..995293 + 117 WP_227457392.1 hypothetical protein -
L4413_RS04715 995376..995684 + 309 WP_010988969.1 hypothetical protein -
L4413_RS04720 995786..996034 - 249 WP_001738030.1 SymE family type I addiction module toxin -
L4413_RS04725 996087..996791 + 705 Protein_916 integrase core domain-containing protein -
L4413_RS04730 997541..998053 + 513 WP_077248260.1 pilus assembly protein -
L4413_RS04735 998137..998874 + 738 WP_001535430.1 pili assembly chaperone SafB -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
inside Genomic island - - 992394..1006682 14288
flank IS/Tn - - 996510..996791 281


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin SymE-like

(14-57)


Sequences

Toxin        


Download         Length: 92 a.a.        Molecular weight: 10032.36 Da        Isoelectric Point: 6.4704

>T233651 WP_000994224.1 NZ_CP091547:c994935-994660 [Salmonella enterica]
MNASGVSVRHINSETCMTACYSQIPSQHLKGDWQEEAGFETGHGVTVKISEGCLILIAETDEVRDLRKELYQVKKSMKHI
KAGVNNVVNGD

Download         Length: 276 bp

>T233651 NZ_LK021128:59269-59565 [Vibrio anguillarum]
ATGTTCACTATAAAGCGCACGCAACTTTTTGATGATTGGTTGAAGACACTTAAAGATGCTCAGGCACGAGGTGCTATCAC
TGCTCGTGTTCAGCGCCTTACTCAGGGTTTGAGTGGGGATGTTAAGCCGGTTGGTTCGGGCATTAGTGAGCTTAGGATAC
ATGTCGGTAAAGGTTATCGAGTTTATTTTAAGCGTAGTGGAAAACAGATCGTTGTCTTACTTTGCGGTGGCAATAAGAAA
ACTCAGAATCAAGATATCGAACGCGCTAAAGAGTTGGTTCAATATTTTGATTTGTAG

Antitoxin


Download         Length: 423 bp

>AT233651 NZ_CP091547:994670-995092 [Salmonella enterica]
TTCACCACATTATTTACCCCCGCCTTAATATGCTTCATCGACTTTTTCACCTGATAAAGCTCCTTCCGTAGATCCCTCAC
TTCGTCCGTCTCTGCAATCAGGATCAAACACCCCTCGGAGATCTTCACGGTGACGCCGTGCCCGGTCTCAAATCCCGCTT
CTTCCTGCCAGTCACCCTTAAGGTGCTGGCTGGGGATTTGTGAGTAACAGGCGGTCATGCAGGTTTCGCTGTTGATATGG
CGGACGCTGACGCCGGAGGCATTCATATTTGCTGACTAAATAAATTCTTATTTATCCGCCGGATGCTGGCTGATTGTGGA
GCTCAGGGTGAGTGAGTATGGGCGCGACATCCTGGCACCGCGCCTCCCTCTCCCCGGCCAGCCCCGGCCGGTGATGAGCA
GCCGGCTGCCGGGGCCGTATTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A3V2JPW5

Antitoxin

Download structure file

References