Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-SR6/-
Location 2224345..2224562 Replicon chromosome
Accession NZ_CP089592
Organism Bacillus subtilis strain Bsi

Toxin (Protein)


Gene name yonT Uniprot ID O31941
Locus tag LUV29_RS11450 Protein ID WP_009967515.1
Coordinates 2224386..2224562 (-) Length 59 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 2224345..2224445 (+)

Genomic Context

------LUV29_RS11465LUV29_RS11420LUV29_RS11425LUV29_RS11430LUV29_RS11435LUV29_RS11440LUV29_RS11445LUV29_RS11450LUV29_RS11455LUV29_RS11460
Location: 2224345..2224445 (101 bp)
Type: Antitoxin
Protein ID: -
Location: 2224503..2224603 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2224503..2224603 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2224503..2224603 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2224503..2224603 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2226942..2227136 (195 bp)
Type: Others
Protein ID: WP_004399291.1
Location: 2219574..2219801 (228 bp)
Type: Others
Protein ID: WP_004399298.1
Location: 2220062..2221378 (1317 bp)
Type: Others
Protein ID: WP_004399369.1
Location: 2221735..2222241 (507 bp)
Type: Others
Protein ID: WP_004399486.1
Location: 2222569..2223801 (1233 bp)
Type: Others
Protein ID: WP_004399445.1
Location: 2223883..2224071 (189 bp)
Type: Others
Protein ID: WP_004399547.1
Location: 2224116..2224367 (252 bp)
Type: Others
Protein ID: WP_010886546.1
Location: 2224386..2224562 (177 bp)
Type: Toxin
Protein ID: WP_009967515.1
Location: 2224937..2225548 (612 bp)
Type: Others
Protein ID: WP_009967516.1
Location: 2225663..2225989 (327 bp)
Type: Others
Protein ID: WP_009967517.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
LUV29_RS114202219574..2219801-228WP_004399298.1helix-turn-helix transcriptional regulator-
LUV29_RS114252220062..2221378-1317WP_004399369.1hypothetical protein-
LUV29_RS114302221735..2222241-507WP_004399486.1hypothetical protein-
LUV29_RS114352222569..2223801-1233WP_004399445.1hypothetical protein-
LUV29_RS114402223883..2224071-189WP_004399547.1hypothetical protein-
LUV29_RS114452224116..2224367-252WP_010886546.1hypothetical protein-
-2224345..2224445+101--Antitoxin
LUV29_RS114502224386..2224562-177WP_009967515.1hypothetical proteinToxin
-2224503..2224603+101NuclAT_2--
-2224503..2224603+101NuclAT_2--
-2224503..2224603+101NuclAT_2--
-2224503..2224603+101NuclAT_2--
LUV29_RS114552224937..2225548-612WP_009967516.1lipoprotein-
LUV29_RS114602225663..2225989-327WP_009967517.1helix-turn-helix transcriptional regulator-
LUV29_RS114652226942..2227136+195WP_004399291.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
insideProphage--2156228..2316487160259


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 59 a.a.        Molecular weight: 6882.45 Da        Isoelectric Point: 12.8833

>T228397 WP_009967515.1 NZ_CP089592:c2224562-2224386 [Bacillus subtilis]
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Download         Length: 177 bp

>T228397 NZ_CP123909:c1779284-1779006 [Pseudomonas atacamensis]
ATGATCGTTAGCTTCAGATGTCCTGAAACCGAATACCTGTTCCGAAGTGGTAAAACCCGTTTCTGGTCAGCCATATTGAG
TGTCGCGGAACGTAAGCTGACGATGCTTGATGCGGCAGCTGCGTTGGCTGATCTCCGATCTCCTCCCGGAAATCGGCTCG
AGTCTCTGGGAGGCGATCGGAAGGGGCAATGCAGTATTCGTATCAACGCCCAATGGCGAATTTGCTTCCTCTGGGGCCTG
AATGGGCCCGAGGATGTTGAAATCGTCGATTATCACTGA

Antitoxin


Download         Length: 101 bp

>AT228397 NZ_CP089592:2224345-2224445 [Bacillus subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBO31941

Antitoxin

Download structure file

References