Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | yonT-as-bsrG/- |
Location | 2219391..2219608 | Replicon | chromosome |
Accession | NZ_CP065789 | ||
Organism | Bacillus subtilis strain LBUM979 |
Toxin (Protein)
Gene name | yonT | Uniprot ID | O31941 |
Locus tag | I8N71_RS11415 | Protein ID | WP_009967515.1 |
Coordinates | 2219391..2219567 (-) | Length | 59 a.a. |
Antitoxin (RNA)
Gene name | as-bsrG | ||
Locus tag | - | ||
Coordinates | 2219508..2219608 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
I8N71_RS11385 | 2214579..2214806 | - | 228 | WP_004399298.1 | helix-turn-helix transcriptional regulator | - |
I8N71_RS11390 | 2215067..2216383 | - | 1317 | WP_004399369.1 | hypothetical protein | - |
I8N71_RS11395 | 2216740..2217246 | - | 507 | WP_004399486.1 | hypothetical protein | - |
I8N71_RS11400 | 2217574..2218806 | - | 1233 | WP_004399445.1 | hypothetical protein | - |
I8N71_RS11405 | 2218888..2219076 | - | 189 | WP_004399547.1 | hypothetical protein | - |
I8N71_RS11410 | 2219121..2219372 | - | 252 | WP_010886546.1 | hypothetical protein | - |
I8N71_RS11415 | 2219391..2219567 | - | 177 | WP_009967515.1 | hypothetical protein | Toxin |
- | 2219508..2219608 | + | 101 | NuclAT_2 | - | Antitoxin |
- | 2219508..2219608 | + | 101 | NuclAT_2 | - | Antitoxin |
- | 2219508..2219608 | + | 101 | NuclAT_2 | - | Antitoxin |
- | 2219508..2219608 | + | 101 | NuclAT_2 | - | Antitoxin |
I8N71_RS11420 | 2219942..2220553 | - | 612 | WP_009967516.1 | lipoprotein | - |
I8N71_RS11425 | 2220668..2220994 | - | 327 | WP_009967517.1 | helix-turn-helix domain-containing protein | - |
I8N71_RS11430 | 2221947..2222141 | + | 195 | WP_004399291.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
inside | Prophage | - | - | 2151233..2286015 | 134782 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 59 a.a. Molecular weight: 6882.45 Da Isoelectric Point: 12.8833
>T183383 WP_009967515.1 NZ_CP065789:c2219567-2219391 [Bacillus subtilis]
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
Download Length: 177 bp
>T183383 NZ_CP086952:44673-44948 [Pseudosulfitobacter pseudonitzschiae]
GTGCCTGACCTTGAATGGAAGGCATTGGCGGTCGCGGACCTGATGGCGATTGTTGACTATATCTCGGATGACAATCCCGA
TGCCGCAATTTCCCTGATGGATGACATTCAAGACAAGGTGCTTGGCCTTCTGACGCATCCCAAATCCGGCCGCCCCGGTA
GGGTGAACGACACGCGAGAGCTGGTGATCCGGCCCAACTATATCGTCGTCTATGCTGAAAACACGGCGGCGGTCACCATT
CTGCGCGTTCTTCATGCGGTGCAGATGTGGCCCTGA
GTGCCTGACCTTGAATGGAAGGCATTGGCGGTCGCGGACCTGATGGCGATTGTTGACTATATCTCGGATGACAATCCCGA
TGCCGCAATTTCCCTGATGGATGACATTCAAGACAAGGTGCTTGGCCTTCTGACGCATCCCAAATCCGGCCGCCCCGGTA
GGGTGAACGACACGCGAGAGCTGGTGATCCGGCCCAACTATATCGTCGTCTATGCTGAAAACACGGCGGCGGTCACCATT
CTGCGCGTTCTTCATGCGGTGCAGATGTGGCCCTGA
Antitoxin
Download Length: 101 bp
>AT183383 NZ_CP065789:2219508-2219608 [Bacillus subtilis]
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTACGATACCCATTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTACGATACCCATTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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