Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-SR6/-
Location 1419487..1419816 Replicon chromosome
Accession NZ_CP064096
Organism Bacillus subtilis strain N1142-3at

Toxin (Protein)


Gene name yonT Uniprot ID C0H439
Locus tag IRJ28_RS07685 Protein ID WP_010886546.1
Coordinates 1419565..1419816 (+) Length 84 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 1419487..1419587 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
IRJ28_RS07665 1416796..1416990 - 195 WP_004399291.1 hypothetical protein -
IRJ28_RS07670 1417943..1418269 + 327 WP_009967517.1 helix-turn-helix transcriptional regulator -
IRJ28_RS07675 1418384..1418995 + 612 WP_009967516.1 lipoprotein -
- 1419329..1419429 - 101 NuclAT_2 - -
- 1419329..1419429 - 101 NuclAT_2 - -
- 1419329..1419429 - 101 NuclAT_2 - -
- 1419329..1419429 - 101 NuclAT_2 - -
IRJ28_RS07680 1419370..1419546 + 177 WP_009967515.1 hypothetical protein -
- 1419487..1419587 - 101 - - Antitoxin
IRJ28_RS07685 1419565..1419816 + 252 WP_010886546.1 hypothetical protein Toxin
IRJ28_RS07690 1419861..1420049 + 189 WP_004399547.1 hypothetical protein -
IRJ28_RS07695 1420131..1421363 + 1233 WP_004399445.1 hypothetical protein -
IRJ28_RS07700 1421691..1422197 + 507 WP_004399486.1 hypothetical protein -
IRJ28_RS07705 1422554..1423870 + 1317 WP_004399369.1 hypothetical protein -
IRJ28_RS07710 1424131..1424358 + 228 WP_004399298.1 helix-turn-helix transcriptional regulator -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
inside Prophage - - 1327445..1487704 160259


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 84 a.a.        Molecular weight: 9956.96 Da        Isoelectric Point: 9.7930

>T180114 WP_010886546.1 NZ_CP064096:1419565-1419816 [Bacillus subtilis]
MNFSFSSYPYYNMIKHIANMKRFSLWFTHITFIGLFLMFQLIKDYFSSEGQALINTIFVVTCIIAILLWIIYCVFLKLRN
KSH

Download         Length: 252 bp

>T180114 NZ_CP085069:316128-316403 [Escherichia coli]
ATGAGAACCAAGGTACAGGCTTTACGGAAGAAACAAAAAAATACATTGGATCAAATAGTTAAAACTCCTGTTCCTCAAGG
GATCAAGTGGTCTGATATAGAGTCACTGGTTAAAGCATTAGGCGGAGAAATTAAGGAAGGAAGAGGTTCGCGTTGCAAGT
TCATACTAAATATGAGCGTTGCGTGTTTCCATCGGCCTCATCCGTCGCCAGATACCGATAAAGGCGCTGTAGAAAGCGTG
CGTGACTGGTTACTAAGTATAGGGGTAAAACCATGA

Antitoxin


Download         Length: 101 bp

>AT180114 NZ_CP064096:c1419587-1419487 [Bacillus subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB C0H439

Antitoxin

Download structure file

References