Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | bsrG-as-bsrH/- |
Location | 1365446..1365736 | Replicon | chromosome |
Accession | NZ_CP064096 | ||
Organism | Bacillus subtilis strain N1142-3at |
Toxin (Protein)
Gene name | bsrG | Uniprot ID | L8EAY0 |
Locus tag | IRJ28_RS07385 | Protein ID | WP_009967548.1 |
Coordinates | 1365620..1365736 (-) | Length | 39 a.a. |
Antitoxin (RNA)
Gene name | as-bsrH | ||
Locus tag | - | ||
Coordinates | 1365446..1365625 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
IRJ28_RS07355 (1360983) | 1360983..1361117 | - | 135 | WP_234047931.1 | transposase | - |
IRJ28_RS07360 (1361252) | 1361252..1361809 | + | 558 | WP_003246042.1 | SMI1/KNR4 family protein | - |
IRJ28_RS07365 (1361909) | 1361909..1363624 | + | 1716 | WP_004398855.1 | ribonuclease YeeF family protein | - |
IRJ28_RS07370 (1363633) | 1363633..1364130 | + | 498 | WP_003246188.1 | SMI1/KNR4 family protein | - |
IRJ28_RS07375 (1364194) | 1364194..1364772 | + | 579 | WP_004399123.1 | SMI1/KNR4 family protein | - |
IRJ28_RS07380 (1364808) | 1364808..1365341 | + | 534 | WP_004399156.1 | GNAT family protein | - |
- (1365446) | 1365446..1365625 | + | 180 | NuclAT_1 | - | Antitoxin |
- (1365446) | 1365446..1365625 | + | 180 | NuclAT_1 | - | Antitoxin |
- (1365446) | 1365446..1365625 | + | 180 | NuclAT_1 | - | Antitoxin |
- (1365446) | 1365446..1365625 | + | 180 | NuclAT_1 | - | Antitoxin |
IRJ28_RS07385 (1365620) | 1365620..1365736 | - | 117 | WP_009967548.1 | type I toxin-antitoxin system toxin BsrG | Toxin |
IRJ28_RS07390 (1365967) | 1365967..1366434 | + | 468 | WP_003246138.1 | YolA family protein | - |
IRJ28_RS07395 (1366440) | 1366440..1366796 | + | 357 | WP_004398595.1 | hypothetical protein | - |
IRJ28_RS07400 (1366839) | 1366839..1367174 | - | 336 | WP_004399073.1 | hypothetical protein | - |
IRJ28_RS07405 (1367348) | 1367348..1367680 | + | 333 | WP_004398710.1 | YolD-like family protein | - |
IRJ28_RS07410 (1367673) | 1367673..1368923 | + | 1251 | WP_004398504.1 | UV-damage repair protein uvrX | - |
IRJ28_RS07415 (1369025) | 1369025..1369342 | + | 318 | WP_009967545.1 | sublancin immunity protein SunI | - |
IRJ28_RS07420 (1369639) | 1369639..1369809 | + | 171 | WP_009967544.1 | bacteriocin sublancin-168 | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
inside | Prophage | - | - | 1327445..1487704 | 160259 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 39 a.a. Molecular weight: 4336.39 Da Isoelectric Point: 10.1022
>T180103 WP_009967548.1 NZ_CP064096:c1365736-1365620 [Bacillus subtilis]
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
Download Length: 117 bp
>T180103 NZ_CP085063:4247120-4247527 [Escherichia coli]
GTGGTCCTGTGGCAATCTGATTTGCGCGTCTCCTGGCGCGCACAGTGGCTTTCCTTGCTGATCCACGGGCTGGTTGCCGC
TGTTATTTTACTCATGCCCTGGCCGCTCAGTTACACCCCGTTATGGATGGTGTTACTTTCGCTGGTGGTGTTTGATTGTG
TTCGCAGCCAGCGACGCATTAATGCTCGCCAGGGAGAAATTCGCCTGTTGATGGACGGGCGTTTGCGTTGGCAAGGGCAG
GAGTGGAGCATCGTCAAAGCGCCGTGGATGATTAAGAGCGGCATGATGCTGCGTTTACGTTCTGATAGCGGTAAACGGCA
ACATTTATGGCTGGCAGCCGACAGCATGGACGAAGCCGAATGGCGGGATTTACGGCGGATATTGTTGCAACAAGAGACGC
AAAGATAA
GTGGTCCTGTGGCAATCTGATTTGCGCGTCTCCTGGCGCGCACAGTGGCTTTCCTTGCTGATCCACGGGCTGGTTGCCGC
TGTTATTTTACTCATGCCCTGGCCGCTCAGTTACACCCCGTTATGGATGGTGTTACTTTCGCTGGTGGTGTTTGATTGTG
TTCGCAGCCAGCGACGCATTAATGCTCGCCAGGGAGAAATTCGCCTGTTGATGGACGGGCGTTTGCGTTGGCAAGGGCAG
GAGTGGAGCATCGTCAAAGCGCCGTGGATGATTAAGAGCGGCATGATGCTGCGTTTACGTTCTGATAGCGGTAAACGGCA
ACATTTATGGCTGGCAGCCGACAGCATGGACGAAGCCGAATGGCGGGATTTACGGCGGATATTGTTGCAACAAGAGACGC
AAAGATAA
Antitoxin
Download Length: 180 bp
>AT180103 NZ_CP064096:1365446-1365625 [Bacillus subtilis]
AATGATACAATTATATAATTATTTTTTGCATTTTGTTTAATTAAATGCATAAAATAAAAAGACCAGGGTGTTGGTAGCAC
CCTGGCTCTGTACAAAAGCTGCCCATCAAAGGGCTTGCTCGTTGTCAAATCTGCGTAGGCCTAACCCTTCAGGTGTCCAA
ACTCAAGGGAAGGTCTATTT
AATGATACAATTATATAATTATTTTTTGCATTTTGTTTAATTAAATGCATAAAATAAAAAGACCAGGGTGTTGGTAGCAC
CCTGGCTCTGTACAAAAGCTGCCCATCAAAGGGCTTGCTCGTTGTCAAATCTGCGTAGGCCTAACCCTTCAGGTGTCCAA
ACTCAAGGGAAGGTCTATTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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