Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-SR6/-
Location 3955123..3955452 Replicon chromosome
Accession NZ_CP064095
Organism Bacillus subtilis strain N1303-2Ay

Toxin (Protein)


Gene name yonT Uniprot ID C0H439
Locus tag IRJ27_RS20635 Protein ID WP_010886546.1
Coordinates 3955201..3955452 (+) Length 84 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 3955123..3955223 (-)

Genomic Context

IRJ27_RS20620IRJ27_RS20625IRJ27_RS20630IRJ27_RS20635IRJ27_RS20640IRJ27_RS20645IRJ27_RS20650IRJ27_RS20655IRJ27_RS20660IRJ27_RS20615------
Location: 3953579..3953905 (327 bp)
Type: Others
Protein ID: WP_009967517.1
Location: 3954020..3954631 (612 bp)
Type: Others
Protein ID: WP_009967516.1
Location: 3955006..3955182 (177 bp)
Type: Others
Protein ID: WP_009967515.1
Location: 3955201..3955452 (252 bp)
Type: Toxin
Protein ID: WP_010886546.1
Location: 3955497..3955685 (189 bp)
Type: Others
Protein ID: WP_004399547.1
Location: 3955767..3956999 (1233 bp)
Type: Others
Protein ID: WP_004399445.1
Location: 3957327..3957833 (507 bp)
Type: Others
Protein ID: WP_004399486.1
Location: 3958190..3959506 (1317 bp)
Type: Others
Protein ID: WP_004399369.1
Location: 3959767..3959994 (228 bp)
Type: Others
Protein ID: WP_004399298.1
Location: 3952432..3952626 (195 bp)
Type: Others
Protein ID: WP_004399291.1
Location: 3954965..3955065 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 3954965..3955065 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 3954965..3955065 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 3954965..3955065 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 3955123..3955223 (101 bp)
Type: Antitoxin
Protein ID: -
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
IRJ27_RS206153952432..3952626-195WP_004399291.1hypothetical protein-
IRJ27_RS206203953579..3953905+327WP_009967517.1helix-turn-helix transcriptional regulator-
IRJ27_RS206253954020..3954631+612WP_009967516.1lipoprotein-
-3954965..3955065-101NuclAT_2--
-3954965..3955065-101NuclAT_2--
-3954965..3955065-101NuclAT_2--
-3954965..3955065-101NuclAT_2--
IRJ27_RS206303955006..3955182+177WP_009967515.1hypothetical protein-
-3955123..3955223-101--Antitoxin
IRJ27_RS206353955201..3955452+252WP_010886546.1hypothetical proteinToxin
IRJ27_RS206403955497..3955685+189WP_004399547.1hypothetical protein-
IRJ27_RS206453955767..3956999+1233WP_004399445.1hypothetical protein-
IRJ27_RS206503957327..3957833+507WP_004399486.1hypothetical protein-
IRJ27_RS206553958190..3959506+1317WP_004399369.1hypothetical protein-
IRJ27_RS206603959767..3959994+228WP_004399298.1helix-turn-helix transcriptional regulator-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
insideProphage--3874311..4023340149029


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 84 a.a.        Molecular weight: 9956.96 Da        Isoelectric Point: 9.7930

>T180093 WP_010886546.1 NZ_CP064095:3955201-3955452 [Bacillus subtilis]
MNFSFSSYPYYNMIKHIANMKRFSLWFTHITFIGLFLMFQLIKDYFSSEGQALINTIFVVTCIIAILLWIIYCVFLKLRN
KSH

Download         Length: 252 bp

>T180093 NZ_CP085063:c2618738-2618448 [Escherichia coli]
ATGAACTATGAGCTGGCGTTTGATCCGCGGGCGCTGAAAGAGTGGCAAAAACTGGGCGTGACAGTCCGGGAACAATTTAA
AAAAAAGCTTGAGGATGTGCTGAAAAGGCCGCGCAATCCATCGGCTAAACTGCGGGATTTACCGGACTGCTACAAAATTA
AGCTGCGCACACAGGGATATCGCCTGGTTTATCAGGTTAACGATAAAGAGTTGCTCGTGTTGGTGATAGCTATTGGTAAG
AGAGAGAACTCAGCCGTTTATGAAGACGCGACTAAACGGCTGGATGAGTGA

Antitoxin


Download         Length: 101 bp

>AT180093 NZ_CP064095:c3955223-3955123 [Bacillus subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBC0H439

Antitoxin

Download structure file

References