Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-SR6/-
Location 3466266..3466595 Replicon chromosome
Accession NZ_CP064094
Organism Bacillus subtilis strain N1108-5at

Toxin (Protein)


Gene name yonT Uniprot ID C0H439
Locus tag IRJ26_RS18445 Protein ID WP_010886546.1
Coordinates 3466344..3466595 (+) Length 84 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 3466266..3466366 (-)

Genomic Context

IRJ26_RS18430IRJ26_RS18435IRJ26_RS18440IRJ26_RS18445IRJ26_RS18450IRJ26_RS18455IRJ26_RS18460IRJ26_RS18465IRJ26_RS18470IRJ26_RS18425------
Location: 3464722..3465048 (327 bp)
Type: Others
Protein ID: WP_009967517.1
Location: 3465163..3465774 (612 bp)
Type: Others
Protein ID: WP_009967516.1
Location: 3466149..3466325 (177 bp)
Type: Others
Protein ID: WP_009967515.1
Location: 3466344..3466595 (252 bp)
Type: Toxin
Protein ID: WP_010886546.1
Location: 3466640..3466828 (189 bp)
Type: Others
Protein ID: WP_004399547.1
Location: 3466910..3468142 (1233 bp)
Type: Others
Protein ID: WP_004399445.1
Location: 3468470..3468976 (507 bp)
Type: Others
Protein ID: WP_004399486.1
Location: 3469333..3470649 (1317 bp)
Type: Others
Protein ID: WP_004399369.1
Location: 3470910..3471137 (228 bp)
Type: Others
Protein ID: WP_004399298.1
Location: 3463575..3463769 (195 bp)
Type: Others
Protein ID: WP_004399291.1
Location: 3466108..3466208 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 3466108..3466208 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 3466108..3466208 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 3466108..3466208 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 3466266..3466366 (101 bp)
Type: Antitoxin
Protein ID: -
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
IRJ26_RS184253463575..3463769-195WP_004399291.1hypothetical protein-
IRJ26_RS184303464722..3465048+327WP_009967517.1helix-turn-helix transcriptional regulator-
IRJ26_RS184353465163..3465774+612WP_009967516.1lipoprotein-
-3466108..3466208-101NuclAT_2--
-3466108..3466208-101NuclAT_2--
-3466108..3466208-101NuclAT_2--
-3466108..3466208-101NuclAT_2--
IRJ26_RS184403466149..3466325+177WP_009967515.1hypothetical protein-
-3466266..3466366-101--Antitoxin
IRJ26_RS184453466344..3466595+252WP_010886546.1hypothetical proteinToxin
IRJ26_RS184503466640..3466828+189WP_004399547.1hypothetical protein-
IRJ26_RS184553466910..3468142+1233WP_004399445.1hypothetical protein-
IRJ26_RS184603468470..3468976+507WP_004399486.1hypothetical protein-
IRJ26_RS184653469333..3470649+1317WP_004399369.1hypothetical protein-
IRJ26_RS184703470910..3471137+228WP_004399298.1helix-turn-helix transcriptional regulator-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
insideProphage--3385454..3534483149029


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 84 a.a.        Molecular weight: 9956.96 Da        Isoelectric Point: 9.7930

>T180070 WP_010886546.1 NZ_CP064094:3466344-3466595 [Bacillus subtilis]
MNFSFSSYPYYNMIKHIANMKRFSLWFTHITFIGLFLMFQLIKDYFSSEGQALINTIFVVTCIIAILLWIIYCVFLKLRN
KSH

Download         Length: 252 bp

>T180070 NZ_CP085060:c3563604-3563269 [Escherichia coli]
ATGGTAAGCCGATACGTACCCGATATGGGCGATCTGATTTGGGTTGATTTTGACCCGACAAAAGGTAGCGAGCAAGCTGG
ACATCGTCCAGCTGTTGTCCTGAGTCCTTTCATGTACAACAACAAAACAGGTATGTGTCTGTGTGTTCCTTGTACAACGC
AATCAAAAGGATATCCGTTCGAAGTTGTTTTATCCGGTCAGGAACGTGATGGCGTAGCGTTAGCTGATCAGGTAAAAAGT
ATCGCCTGGCGGGCAAGAGGAGCAACGAAGAAAGGAACAGTTGCCCCAGAGGAATTACAACTCATTAAAGCCAAAATTAA
CGTACTGATTGGGTAG

Antitoxin


Download         Length: 101 bp

>AT180070 NZ_CP064094:c3466366-3466266 [Bacillus subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBC0H439

Antitoxin

Download structure file

References