Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-SR6/-
Location 3049994..3050323 Replicon chromosome
Accession NZ_CP064093
Organism Bacillus subtilis strain N1282-4at

Toxin (Protein)


Gene name yonT Uniprot ID C0H439
Locus tag IRJ24_RS16150 Protein ID WP_010886546.1
Coordinates 3050072..3050323 (+) Length 84 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 3049994..3050094 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
IRJ24_RS16130 3047303..3047497 - 195 WP_004399291.1 hypothetical protein -
IRJ24_RS16135 3048450..3048776 + 327 WP_009967517.1 helix-turn-helix transcriptional regulator -
IRJ24_RS16140 3048891..3049502 + 612 WP_009967516.1 lipoprotein -
- 3049836..3049936 - 101 NuclAT_2 - -
- 3049836..3049936 - 101 NuclAT_2 - -
- 3049836..3049936 - 101 NuclAT_2 - -
- 3049836..3049936 - 101 NuclAT_2 - -
IRJ24_RS16145 3049877..3050053 + 177 WP_009967515.1 hypothetical protein -
- 3049994..3050094 - 101 - - Antitoxin
IRJ24_RS16150 3050072..3050323 + 252 WP_010886546.1 hypothetical protein Toxin
IRJ24_RS16155 3050368..3050556 + 189 WP_004399547.1 hypothetical protein -
IRJ24_RS16160 3050638..3051870 + 1233 WP_004399445.1 hypothetical protein -
IRJ24_RS16165 3052198..3052704 + 507 WP_004399486.1 hypothetical protein -
IRJ24_RS16170 3053061..3054377 + 1317 WP_004399369.1 hypothetical protein -
IRJ24_RS16175 3054638..3054865 + 228 WP_004399298.1 helix-turn-helix transcriptional regulator -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
inside Prophage - - 2982784..3118211 135427


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 84 a.a.        Molecular weight: 9956.96 Da        Isoelectric Point: 9.7930

>T180046 WP_010886546.1 NZ_CP064093:3050072-3050323 [Bacillus subtilis]
MNFSFSSYPYYNMIKHIANMKRFSLWFTHITFIGLFLMFQLIKDYFSSEGQALINTIFVVTCIIAILLWIIYCVFLKLRN
KSH

Download         Length: 252 bp

>T180046 NZ_CP085056:3476664-3476882 [Escherichia coli]
ATGTCCGAAAAACCTTTAACGAAAACCGATTATTTAATGCGTTTACGTCGTTGCCAGACAATTGACACGCTGGAGCGTGT
TATCGAGAAAAATAAATACGAATTATCAGATAATGAACTGGCGGTATTTTACTCAGCCGCAGATCACCGCCTCGCCGAAT
TGACCATGAATAAACTGTACGACAAGATCCCTTCCTCAGTTTGGAAATTTATTCGCTAA

Antitoxin


Download         Length: 101 bp

>AT180046 NZ_CP064093:c3050094-3049994 [Bacillus subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB C0H439

Antitoxin

Download structure file

References