Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-SR6/-
Location 2219747..2219964 Replicon chromosome
Accession NZ_CP058242
Organism Bacillus subtilis strain SP1

Toxin (Protein)


Gene name yonT Uniprot ID O31941
Locus tag HWV68_RS11390 Protein ID WP_009967515.1
Coordinates 2219788..2219964 (-) Length 59 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 2219747..2219847 (+)

Genomic Context

------HWV68_RS11405HWV68_RS11360HWV68_RS11365HWV68_RS11370HWV68_RS11375HWV68_RS11380HWV68_RS11385HWV68_RS11390HWV68_RS11395HWV68_RS11400
Location: 2219747..2219847 (101 bp)
Type: Antitoxin
Protein ID: -
Location: 2219905..2220005 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2219905..2220005 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2219905..2220005 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2219905..2220005 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2222344..2222538 (195 bp)
Type: Others
Protein ID: WP_004399291.1
Location: 2214976..2215203 (228 bp)
Type: Others
Protein ID: WP_004399298.1
Location: 2215464..2216780 (1317 bp)
Type: Others
Protein ID: WP_004399369.1
Location: 2217137..2217643 (507 bp)
Type: Others
Protein ID: WP_004399486.1
Location: 2217971..2219203 (1233 bp)
Type: Others
Protein ID: WP_004399445.1
Location: 2219285..2219473 (189 bp)
Type: Others
Protein ID: WP_004399547.1
Location: 2219518..2219769 (252 bp)
Type: Others
Protein ID: WP_010886546.1
Location: 2219788..2219964 (177 bp)
Type: Toxin
Protein ID: WP_009967515.1
Location: 2220339..2220950 (612 bp)
Type: Others
Protein ID: WP_009967516.1
Location: 2221065..2221391 (327 bp)
Type: Others
Protein ID: WP_009967517.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
HWV68_RS113602214976..2215203-228WP_004399298.1helix-turn-helix transcriptional regulator-
HWV68_RS113652215464..2216780-1317WP_004399369.1hypothetical protein-
HWV68_RS113702217137..2217643-507WP_004399486.1hypothetical protein-
HWV68_RS113752217971..2219203-1233WP_004399445.1hypothetical protein-
HWV68_RS113802219285..2219473-189WP_004399547.1hypothetical protein-
HWV68_RS113852219518..2219769-252WP_010886546.1hypothetical protein-
-2219747..2219847+101--Antitoxin
HWV68_RS113902219788..2219964-177WP_009967515.1hypothetical proteinToxin
-2219905..2220005+101NuclAT_2--
-2219905..2220005+101NuclAT_2--
-2219905..2220005+101NuclAT_2--
-2219905..2220005+101NuclAT_2--
HWV68_RS113952220339..2220950-612WP_009967516.1lipoprotein-
HWV68_RS114002221065..2221391-327WP_009967517.1helix-turn-helix domain-containing protein-
HWV68_RS114052222344..2222538+195WP_004399291.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
insideProphage--2151630..2286412134782


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 59 a.a.        Molecular weight: 6882.45 Da        Isoelectric Point: 12.8833

>T166387 WP_009967515.1 NZ_CP058242:c2219964-2219788 [Bacillus subtilis]
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Download         Length: 177 bp

>T166387 NZ_CP074143:c1521104-1520721 [Serratia sp. JSRIV002]
ATGCAAACTGTATCGGTTACCCCGAAACGGGCAGCACCGTCTTGCCCATCACCCATCGCGATCTGGCAGGTATTGCTGAC
CCATCTATTGCAACAACACTATGGTCTGGCACTGGAAGATACCGCCTTTAGTCACGAGGGTGTGATCCAAGAGCATCTTA
ATGCAGGGATTTCCCTGGCGGATGCGCTGAATTTTATCGTGGAAAAATATGAACTGGTCCGTATTGATCGCACCGGTTTT
AGTATCCGTGAACAATCACCGTTTATTACGCCTATCGATCTTCTCCGGGCCCGACAGGCTACGGGTCTGATGAAACGCCG
AGGTTACAAGGCCATCACTCATATCACCAACGGTAAAAACCAACGACAGGGGGCACATCCGTGA

Antitoxin


Download         Length: 101 bp

>AT166387 NZ_CP058242:2219747-2219847 [Bacillus subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBO31941

Antitoxin

Download structure file

References