Detailed information of TA system TA153024

Bioinformatically predicted

Overview

TA module

• Type: I
• Classification (family/domain): yonT-SR6/-
• Location: 2212815..2213144
• Replicon: chromosome
• Accession: NZ_CP050532
• Organism: Bacillus subtilis subsp. subtilis str. SMY

Toxin (Protein)

• Gene name: yonT
• Uniprot ID: C0H439
• Locus tag: HCN55_RS11355
• Protein ID: WP_010886546.1
• Coordinates: 2212815..2213066 (-)
• Length: 84 a.a.

Antitoxin (RNA)

Gene name	SR6
Locus tag	-
Coordinates	2213044..2213144 (+)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
HCN55_RS11330	2208273..2208500	-	228	WP_004399298.1	helix-turn-helix transcriptional regulator	-
HCN55_RS11335	2208761..2210077	-	1317	WP_004399369.1	hypothetical protein	-
HCN55_RS11340	2210434..2210940	-	507	WP_004399486.1	hypothetical protein	-
HCN55_RS11345	2211268..2212500	-	1233	WP_004399445.1	hypothetical protein	-
HCN55_RS11350	2212582..2212770	-	189	WP_004399547.1	hypothetical protein	-
HCN55_RS11355	2212815..2213066	-	252	WP_010886546.1	hypothetical protein	Toxin
-	2213044..2213144	+	101	-	-	Antitoxin
HCN55_RS11360	2213085..2213261	-	177	WP_009967515.1	hypothetical protein	-
-	2213202..2213302	+	101	NuclAT_2	-	-
-	2213202..2213302	+	101	NuclAT_2	-	-
-	2213202..2213302	+	101	NuclAT_2	-	-
-	2213202..2213302	+	101	NuclAT_2	-	-
HCN55_RS11365	2213636..2214247	-	612	WP_009967516.1	lipoprotein	-
HCN55_RS11370	2214362..2214688	-	327	WP_009967517.1	helix-turn-helix domain-containing protein	-
HCN55_RS11375	2215641..2215835	+	195	WP_004399291.1	hypothetical protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)
	Similar MGE(s) Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE. Detail Genome accession Organism MGE type Related TA Coordinates Mash distance View NC_000964 Bacillus subtilis subsp. subtilis str. 168 Prophage TA006323, TA006321, TA06323b, TA020252 2151626..2286408 0	inside	Prophage	-	-	2144927..2279709	134782

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Fido domain (60-169)

Sequences

Toxin

Protein

• Length: 84 a.a.
• Molecular weight: 9956.96 Da
• Isoelectric Point: 9.7930

>T153024 WP_010886546.1 NZ_CP050532:c2213066-2212815 [Bacillus subtilis subsp. subtilis str. SMY]
MNFSFSSYPYYNMIKHIANMKRFSLWFTHITFIGLFLMFQLIKDYFSSEGQALINTIFVVTCIIAILLWIIYCVFLKLRN
KSH

Nucleotide

• Length: 252 bp

>T153024 NZ_CP066747:12645-13328 [Campylobacter jejuni]
ATGATTGATAAAGTTTTGAAATTTTTAGATGATGGTATTCCTAAAAATGATTTTGACAGACAACTTTTAGCTTCTAATTT
AGTAGGCGCAACAAATTTAATAGAGTTAAATAAACGAGAAAGAGAAATTACATTAAAAAAACAATTAAAACTACAACTCA
ATCCCATTAAAGGCAATTTCGATTATCAGCATTTAAAAGATATACATAAAGCACTTTTTGAAGATGTTTATACTTGGGCA
GGACAAGATAGAATGCAAATGGGACTAAAAGAAAAATTTGCAAAATATGCACCCAATGGAGCAATTATTAATTTTGTTCC
TGGAAAAGAGTTAGATAAATACTCTAAAATAATTTTTGATGAACTTGCAAAAAATAACTATCTAAAAAACTCCAAAGATC
TAAATCATTTTGCAAAAAATTTAGCAAAATTTATGGGCGAAATCAATGCTTTACACCCTTTTAGAGAAGGTAACGGCAGA
ACTCAAAGAATATTTTTAAACGAGTTGGCTAAAAATGCAGGTTATAAACTTGATTTAAATTTAATTTCTAAGCATAAAAT
GATATATGCTTGTGCAGAAGCTTCACAATTAAAACCTGGAAGATTGGAGGCTTTAATTAAAGACAATCTAAAAAACTTTA
GACAAAATTTAGATTTGGAGCAAAATAAAGGAATATCATTATAA

Antitoxin

Nucleotide

• Length: 101 bp

>AT153024 NZ_CP050532:2213044-2213144 [Bacillus subtilis subsp. subtilis str. SMY]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT

Structures

Toxin

• AlphaFold DB: C0H439

Antitoxin