Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | yonT-SR6/- |
Location | 2219106..2219435 | Replicon | chromosome |
Accession | NZ_CP045812 | ||
Organism | Bacillus subtilis strain P8_B3 |
Toxin (Protein)
Gene name | yonT | Uniprot ID | C0H439 |
Locus tag | GII89_RS11400 | Protein ID | WP_010886546.1 |
Coordinates | 2219106..2219357 (-) | Length | 84 a.a. |
Antitoxin (RNA)
Gene name | SR6 | ||
Locus tag | - | ||
Coordinates | 2219335..2219435 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
GII89_RS11375 | 2214564..2214791 | - | 228 | WP_004399298.1 | helix-turn-helix transcriptional regulator | - |
GII89_RS11380 | 2215052..2216368 | - | 1317 | WP_004399369.1 | hypothetical protein | - |
GII89_RS11385 | 2216725..2217231 | - | 507 | WP_004399486.1 | hypothetical protein | - |
GII89_RS11390 | 2217559..2218791 | - | 1233 | WP_004399445.1 | hypothetical protein | - |
GII89_RS11395 | 2218873..2219061 | - | 189 | WP_004399547.1 | hypothetical protein | - |
GII89_RS11400 | 2219106..2219357 | - | 252 | WP_010886546.1 | hypothetical protein | Toxin |
- | 2219335..2219435 | + | 101 | - | - | Antitoxin |
GII89_RS11405 | 2219376..2219552 | - | 177 | WP_009967515.1 | hypothetical protein | - |
- | 2219493..2219593 | + | 101 | NuclAT_2 | - | - |
- | 2219493..2219593 | + | 101 | NuclAT_2 | - | - |
- | 2219493..2219593 | + | 101 | NuclAT_2 | - | - |
- | 2219493..2219593 | + | 101 | NuclAT_2 | - | - |
GII89_RS11410 | 2219927..2220538 | - | 612 | WP_009967516.1 | lipoprotein | - |
GII89_RS11415 | 2220653..2220979 | - | 327 | WP_009967517.1 | helix-turn-helix domain-containing protein | - |
GII89_RS11420 | 2221932..2222126 | + | 195 | WP_004399291.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
inside | Prophage | - | - | 2151218..2286000 | 134782 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 84 a.a. Molecular weight: 9956.96 Da Isoelectric Point: 9.7930
>T142634 WP_010886546.1 NZ_CP045812:c2219357-2219106 [Bacillus subtilis]
MNFSFSSYPYYNMIKHIANMKRFSLWFTHITFIGLFLMFQLIKDYFSSEGQALINTIFVVTCIIAILLWIIYCVFLKLRN
KSH
MNFSFSSYPYYNMIKHIANMKRFSLWFTHITFIGLFLMFQLIKDYFSSEGQALINTIFVVTCIIAILLWIIYCVFLKLRN
KSH
Download Length: 252 bp
>T142634 NZ_CP060796:2654227-2654370 [Enterococcus faecalis]
ATGAATGTAAGTGCTAAAATCTATGAAAGGAGAGGCCTTTTGTCAGCATATGAGACAATTCAGACGATTCTAGGTTTTGG
TATGTTTACCATTGCTTTGATTGCACTGATTGTGAAATTGCTTAAAAATGACAAGAAAAAATAA
ATGAATGTAAGTGCTAAAATCTATGAAAGGAGAGGCCTTTTGTCAGCATATGAGACAATTCAGACGATTCTAGGTTTTGG
TATGTTTACCATTGCTTTGATTGCACTGATTGTGAAATTGCTTAAAAATGACAAGAAAAAATAA
Antitoxin
Download Length: 101 bp
>AT142634 NZ_CP045812:2219335-2219435 [Bacillus subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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