Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | yonT-as-bsrG/- |
Location | 2219413..2219630 | Replicon | chromosome |
Accession | NZ_CP032310 | ||
Organism | Bacillus subtilis strain WB800N |
Toxin (Protein)
Gene name | yonT | Uniprot ID | O31941 |
Locus tag | D3Z87_RS11540 | Protein ID | WP_009967515.1 |
Coordinates | 2219413..2219589 (-) | Length | 59 a.a. |
Antitoxin (RNA)
Gene name | as-bsrG | ||
Locus tag | - | ||
Coordinates | 2219530..2219630 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
D3Z87_RS11510 | 2214601..2214828 | - | 228 | WP_004399298.1 | helix-turn-helix transcriptional regulator | - |
D3Z87_RS11515 | 2215089..2216405 | - | 1317 | WP_004399369.1 | hypothetical protein | - |
D3Z87_RS11520 | 2216762..2217268 | - | 507 | WP_004399486.1 | hypothetical protein | - |
D3Z87_RS11525 | 2217596..2218828 | - | 1233 | WP_004399445.1 | hypothetical protein | - |
D3Z87_RS11530 | 2218910..2219098 | - | 189 | WP_004399547.1 | hypothetical protein | - |
D3Z87_RS11535 | 2219143..2219394 | - | 252 | WP_010886546.1 | hypothetical protein | - |
D3Z87_RS11540 | 2219413..2219589 | - | 177 | WP_009967515.1 | hypothetical protein | Toxin |
- | 2219530..2219630 | + | 101 | NuclAT_2 | - | Antitoxin |
- | 2219530..2219630 | + | 101 | NuclAT_2 | - | Antitoxin |
- | 2219530..2219630 | + | 101 | NuclAT_2 | - | Antitoxin |
- | 2219530..2219630 | + | 101 | NuclAT_2 | - | Antitoxin |
D3Z87_RS11545 | 2219964..2220575 | - | 612 | WP_009967516.1 | lipoprotein | - |
D3Z87_RS11550 | 2220690..2221016 | - | 327 | WP_009967517.1 | helix-turn-helix domain-containing protein | - |
D3Z87_RS11555 | 2221969..2222163 | + | 195 | WP_004399291.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
inside | Prophage | - | - | 2151258..2286037 | 134779 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 59 a.a. Molecular weight: 6882.45 Da Isoelectric Point: 12.8833
>T111625 WP_009967515.1 NZ_CP032310:c2219589-2219413 [Bacillus subtilis]
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
Download Length: 177 bp
>T111625 NZ_CP032310:c2219589-2219413 [Bacillus subtilis]
GTGCTTGAGAAAATGGGTATCGTAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGGTAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA
GTGCTTGAGAAAATGGGTATCGTAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGGTAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA
Antitoxin
Download Length: 101 bp
>AT111625 NZ_CP032310:2219530-2219630 [Bacillus subtilis]
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTACGATACCCATTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTACGATACCCATTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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