MGE detailed information
MGE type: Conjugative plasmid MGE length: 109001 bp
Accession: NZ_OW848786 Location: 1..109001 Organism: Escherichia coli isolate 131 Replicon: plasmid P1
Accession: NZ_OW848786 Location: 1..109001 Organism: Escherichia coli isolate 131 Replicon: plasmid P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ117_RS24620 (1) | 1..858 | + | 858 | WP_000130647.1 | incFII family plasmid replication initiator RepA | - |
| LQ117_RS24625 (1797) | 1797..2450 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| LQ117_RS24630 (2543) | 2543..2800 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| LQ117_RS24635 (2733) | 2733..3134 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| LQ117_RS24640 (3271) | 3271..6168 | - | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| LQ117_RS24645 (6263) | 6263..6868 | + | 606 | WP_000509965.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| LQ117_RS24650 (6892) | 6892..7404 | - | 513 | Protein_6 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LQ117_RS24655 (7470) | 7470..8174 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LQ117_RS24660 (8318) | 8318..8872 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| LQ117_RS24665 (9003) | 9003..9833 | + | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| LQ117_RS24670 (9971) | 9971..10411 | + | 441 | Protein_10 | CatB-related O-acetyltransferase | - |
| LQ117_RS24675 (10465) | 10465..11169 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LQ117_RS24680 (11449) | 11449..12210 | + | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| LQ117_RS24685 (12557) | 12557..14443 | + | 1887 | WP_000118029.1 | FTR1 family protein | - |
| LQ117_RS24690 (14484) | 14484..15011 | + | 528 | WP_000178050.1 | iron transporter | - |
| LQ117_RS24695 (15115) | 15115..16494 | + | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| LQ117_RS24700 (16497) | 16497..17780 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| LQ117_RS24705 (17770) | 17770..18900 | + | 1131 | WP_000729220.1 | ABC transporter permease | - |
| LQ117_RS24710 (18905) | 18905..19600 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| LQ117_RS24715 (19587) | 19587..20072 | + | 486 | WP_001267177.1 | TlpA disulfide reductase family protein | - |
| LQ117_RS24720 (20097) | 20097..20582 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| LQ117_RS24725 (20704) | 20704..21234 | + | 531 | Protein_21 | histidine-type phosphatase | - |
| LQ117_RS24730 (21292) | 21292..21996 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LQ117_RS24735 (22061) | 22061..22537 | - | 477 | Protein_23 | fertility inhibition protein FinO | - |
| LQ117_RS24740 (22640) | 22640..23500 | - | 861 | WP_000704528.1 | Quorum-quenching protein AidA | VF |
| LQ117_RS24745 (23559) | 23559..24305 | - | 747 | WP_230146809.1 | conjugal transfer pilus acetylase TraX | - |
| LQ117_RS24750 (24325) | 24325..27030 | - | 2706 | Protein_26 | Multifunctional conjugation protein TraI | Relaxase |
| LQ117_RS24755 (27086) | 27086..27790 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LQ117_RS24760 (27855) | 27855..28241 | - | 387 | Protein_28 | TraD N-terminal domain-containing protein | - |
| LQ117_RS24765 (28494) | 28494..29225 | - | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
| LQ117_RS24770 (29257) | 29257..29754 | - | 498 | WP_000605861.1 | hypothetical protein | - |
| LQ117_RS24775 (29773) | 29773..32592 | - | 2820 | WP_001007057.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| LQ117_RS24780 (32589) | 32589..33962 | - | 1374 | WP_001137364.1 | conjugal transfer pilus assembly protein TraH | - |
| LQ117_RS24785 (33949) | 33949..34341 | - | 393 | WP_000660703.1 | F-type conjugal transfer protein TrbF | - |
| LQ117_RS24790 (34322) | 34322..34663 | - | 342 | WP_001448115.1 | P-type conjugative transfer protein TrbJ | - |
| LQ117_RS24795 (34593) | 34593..35138 | - | 546 | WP_000059824.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| LQ117_RS24800 (35125) | 35125..35409 | - | 285 | WP_001448202.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LQ117_RS24805 (35536) | 35536..35874 | - | 339 | WP_001287905.1 | conjugal transfer protein TrbA | - |
| LQ117_RS24810 (35890) | 35890..36633 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LQ117_RS24815 (36626) | 36626..36883 | - | 258 | WP_000864320.1 | conjugal transfer protein TrbE | - |
| LQ117_RS24820 (36910) | 36910..38718 | - | 1809 | WP_000821863.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| LQ117_RS24825 (38715) | 38715..39353 | - | 639 | WP_001080257.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LQ117_RS24830 (39362) | 39362..39667 | - | 306 | WP_000224411.1 | hypothetical protein | - |
| LQ117_RS24835 (39697) | 39697..40689 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| LQ117_RS24840 (40686) | 40686..41318 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| LQ117_RS24845 (41315) | 41315..41701 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| LQ117_RS24850 (41698) | 41698..44325 | - | 2628 | WP_001064239.1 | type IV secretion system protein TraC | - |
| LQ117_RS24855 (44485) | 44485..44706 | - | 222 | WP_001278978.1 | conjugal transfer protein TraR | - |
| LQ117_RS24860 (44841) | 44841..45356 | - | 516 | WP_000809893.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LQ117_RS24865 (45353) | 45353..45604 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| LQ117_RS24870 (45597) | 45597..45917 | - | 321 | WP_001057302.1 | conjugal transfer protein TrbD | - |
| LQ117_RS24875 (45904) | 45904..46488 | - | 585 | WP_000002795.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| LQ117_RS24880 (46478) | 46478..47905 | - | 1428 | WP_000146638.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| LQ117_RS24885 (47905) | 47905..48633 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| LQ117_RS24890 (48620) | 48620..49186 | - | 567 | WP_000399804.1 | type IV conjugative transfer system protein TraE | - |
| LQ117_RS24895 (49208) | 49208..49519 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| LQ117_RS24900 (49524) | 49524..49886 | - | 363 | WP_001098998.1 | type IV conjugative transfer system pilin TraA | - |
| LQ117_RS24905 (49920) | 49920..50147 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| LQ117_RS24910 (50241) | 50241..50927 | - | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| LQ117_RS24915 (51121) | 51121..51504 | - | 384 | WP_001151564.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LQ117_RS24920 (51790) | 51790..52437 | + | 648 | WP_000614282.1 | hypothetical protein | VF |
| LQ117_RS24925 (52734) | 52734..53555 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| LQ117_RS24930 (53675) | 53675..53962 | - | 288 | WP_000107537.1 | hypothetical protein | - |
| LQ117_RS24935 (54260) | 54260..54433 | + | 174 | Protein_63 | hypothetical protein | - |
| LQ117_RS24940 (54431) | 54431..54661 | - | 231 | WP_071587244.1 | hypothetical protein | - |
| LQ117_RS24945 (54881) | 54881..55006 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| LQ117_RS24950 (54948) | 54948..55097 | - | 150 | Protein_66 | plasmid maintenance protein Mok | - |
| - (55083) | 55083..55307 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (55083) | 55083..55307 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (55083) | 55083..55307 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (55083) | 55083..55307 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| LQ117_RS24955 (55119) | 55119..55307 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| LQ117_RS24960 (55276) | 55276..56038 | - | 763 | Protein_68 | plasmid SOS inhibition protein A | - |
| LQ117_RS24965 (56035) | 56035..56469 | - | 435 | WP_000845901.1 | conjugation system SOS inhibitor PsiB | - |
| LQ117_RS24970 (56524) | 56524..58482 | - | 1959 | WP_001145469.1 | ParB/RepB/Spo0J family partition protein | - |
| LQ117_RS24975 (58541) | 58541..58774 | - | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| LQ117_RS24980 (58830) | 58830..59357 | - | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| LQ117_RS24985 (59827) | 59827..60069 | - | 243 | WP_001365577.1 | hypothetical protein | - |
| LQ117_RS24990 (59997) | 59997..60221 | - | 225 | WP_021538344.1 | hypothetical protein | - |
| LQ117_RS24995 (60221) | 60221..60784 | - | 564 | WP_012783964.1 | class I SAM-dependent methyltransferase | - |
| LQ117_RS25000 (60831) | 60831..62192 | - | 1362 | WP_230146810.1 | DUF3560 domain-containing protein | - |
| LQ117_RS25005 (62244) | 62244..62474 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| LQ117_RS25010 (63509) | 63509..63700 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| LQ117_RS25015 (63697) | 63697..64119 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| LQ117_RS25020 (64166) | 64166..64591 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| LQ117_RS25025 (65008) | 65008..65784 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| LQ117_RS25030 (65835) | 65835..66353 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| LQ117_RS25035 (66283) | 66283..66504 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| LQ117_RS25040 (66505) | 66505..67188 | - | 684 | WP_000086185.1 | DNA methylase | - |
| LQ117_RS25045 (67265) | 67265..67576 | - | 312 | WP_011254640.1 | hypothetical protein | - |
| LQ117_RS25050 (67573) | 67573..68475 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| LQ117_RS25055 (69342) | 69342..70313 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| LQ117_RS25060 (70313) | 70313..71479 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| LQ117_RS25065 (72067) | 72067..72822 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| LQ117_RS25070 (73542) | 73542..74348 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| LQ117_RS25075 (74349) | 74349..74654 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LQ117_RS25080 (74656) | 74656..74874 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LQ117_RS25085 (75420) | 75420..75932 | + | 513 | WP_000151784.1 | hypothetical protein | - |
| LQ117_RS25090 (75966) | 75966..77087 | - | 1122 | WP_012783980.1 | DUF3800 domain-containing protein | - |
| LQ117_RS25095 (77179) | 77179..77604 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| LQ117_RS25100 (77601) | 77601..77951 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| LQ117_RS25105 (77982) | 77982..79595 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| LQ117_RS25110 (79806) | 79806..80579 | - | 774 | WP_000905949.1 | hypothetical protein | - |
| LQ117_RS25115 (80592) | 80592..81092 | - | 501 | WP_000528932.1 | HEPN family nuclease | - |
| LQ117_RS25120 (81357) | 81357..81587 | + | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LQ117_RS25125 (81584) | 81584..82000 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LQ117_RS25130 (82045) | 82045..85839 | - | 3795 | WP_001144732.1 | hypothetical protein | - |
| LQ117_RS25135 (86220) | 86220..86450 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LQ117_RS25140 (86447) | 86447..86863 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LQ117_RS25145 (86938) | 86938..88503 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| LQ117_RS25150 (88488) | 88488..89510 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| LQ117_RS25160 (90495) | 90495..90763 | - | 269 | Protein_108 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LQ117_RS25165 (90750) | 90750..91018 | - | 269 | Protein_109 | type II toxin-antitoxin system ParD family antitoxin | - |
| LQ117_RS25170 (91550) | 91550..92719 | + | 1170 | WP_001072355.1 | hypothetical protein | - |
| LQ117_RS25175 (92752) | 92752..92880 | + | 129 | Protein_111 | IS481 family transposase | - |
| LQ117_RS25180 (93005) | 93005..93208 | - | 204 | Protein_112 | hypothetical protein | - |
| LQ117_RS25185 (93314) | 93314..93589 | - | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LQ117_RS25190 (93589) | 93589..93873 | - | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| LQ117_RS25195 (94478) | 94478..95230 | + | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| LQ117_RS25200 (95276) | 95276..96241 | - | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| LQ117_RS25205 (96274) | 96274..96654 | - | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| LQ117_RS25210 (96679) | 96679..97569 | - | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| LQ117_RS25215 (97802) | 97802..97996 | - | 195 | WP_000796505.1 | hypothetical protein | - |
| LQ117_RS25220 (97970) | 97970..98410 | + | 441 | Protein_120 | zinc-binding dehydrogenase | - |
| LQ117_RS25225 (98541) | 98541..99419 | + | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| LQ117_RS25230 (99409) | 99409..100296 | + | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| LQ117_RS25235 (100307) | 100307..101131 | + | 825 | WP_000922702.1 | phosphodiesterase | - |
| LQ117_RS25240 (101137) | 101137..102210 | + | 1074 | WP_000950177.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| LQ117_RS25245 (102203) | 102203..103513 | + | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| LQ117_RS25250 (103572) | 103572..103880 | - | 309 | Protein_126 | IS4 family transposase ISEc13 | Transposase |
| LQ117_RS25255 (103957) | 103957..104130 | - | 174 | WP_000338295.1 | Tn3 family transposase | - |
| LQ117_RS25260 (104212) | 104212..105408 | - | 1197 | Protein_128 | IS3 family transposase | - |
| LQ117_RS25265 (105433) | 105433..106137 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LQ117_RS25270 (106191) | 106191..106280 | + | 90 | Protein_130 | conjugal transfer protein | - |
| LQ117_RS25275 (106409) | 106409..106621 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| LQ117_RS25280 (106866) | 106866..107327 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| LQ117_RS25285 (107373) | 107373..107582 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| LQ117_RS25290 (107620) | 107620..108210 | + | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| LQ117_RS25295 (108450) | 108450..108710 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| LQ117_RS25300 (108804) | 108804..108989 | + | 186 | WP_012615301.1 | plasmid copy control protein CopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|