MGE detailed information

MGE type: IS/Tn        MGE length: 438 bp
Accession: NZ_OW443150        Location: 170840..171277         Organism: Vibrio cholerae strain CNRVC190247 isolate YE-NCPHL-18035-PI       Replicon: chromosome

Gene structure

Location: 165867..167078 (1212 bp)
Type: Toxin
Protein ID: WP_032477282.1

Location: 168829..170664 (1836 bp)
Type: Others
Protein ID: WP_032477280.1

Location: 170840..171277 (438 bp)
Type: Transposase
Protein ID: WP_000503164.1

Location: 173393..174190 (798 bp)
Type: Others
Protein ID: WP_000098350.1

Location: 167322..168431 (1110 bp)
Type: Others
Protein ID: WP_032477281.1

Location: 171359..172999 (1641 bp)
Type: Others
Protein ID: WP_032477333.1

Location: 174156..174614 (459 bp)
Type: Others
Protein ID: WP_001886229.1

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Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
OC536_RS00795 (CNRVC190247_00162)	165867..167078	+	1212	WP_032477282.1	RelA/SpoT domain-containing protein	Toxin Detail
OC536_RS00800 (CNRVC190247_00163)	167322..168431	-	1110	WP_032477281.1	tRNA (uridine(54)-C5)-methyltransferase TrmA	-
OC536_RS00805 (CNRVC190247_00164)	168829..170664	+	1836	WP_032477280.1	TonB-dependent vitamin B12 receptor	-
OC536_RS00810 (CNRVC190247_00165)	170840..171277	+	438	WP_000503164.1	IS200-IS605 family transposase IS1004	Transposase
OC536_RS00815 (CNRVC190247_00166)	171359..172999	-	1641	WP_032477333.1	S8 family peptidase	-
OC536_RS00820 (CNRVC190247_00167)	173393..174190	+	798	WP_000098350.1	glutamate racemase	-
OC536_RS00825 (CNRVC190247_00168)	174156..174614	-	459	WP_001886229.1	RNA-binding protein	-

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Similar MGE(s)

Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

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Detail	Organism	MGE type	Related TA	Genome accession	Coordinates	Mash distance
	Vibrio cholerae O1 biovar El Tor str. N16961	IS/Tn	TA179, TA177, TA178, TA10035	NC_002506	428335..428772	0.005