MGE detailed information
MGE type: Prophage MGE length: 33462 bp
Accession: NZ_LT615378 Location: 1634656..1668117 Organism: Escherichia coli isolate 103 Replicon: chromosome
Accession: NZ_LT615378 Location: 1634656..1668117 Organism: Escherichia coli isolate 103 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BV310_RS08735 () | 1631171..1631917 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| BV310_RS08740 () | 1632006..1632692 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| BV310_RS08745 () | 1632869..1633072 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| BV310_RS08750 () | 1633107..1634567 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| BV310_RS08755 () | 1634656..1636023 | - | 1368 | Protein_1556 | MHS family MFS transporter | - |
| BV310_RS25110 () | 1636544..1636657 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| BV310_RS08760 () | 1636726..1636959 | + | 234 | WP_075320776.1 | cold shock protein YdfK | - |
| BV310_RS08765 () | 1637276..1637866 | + | 591 | WP_075320777.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| BV310_RS08770 () | 1637964..1638539 | - | 576 | WP_075320778.1 | tail fiber assembly protein | - |
| BV310_RS08775 () | 1638539..1639501 | - | 963 | WP_075320779.1 | phage tail protein | - |
| BV310_RS08780 () | 1639452..1640021 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| BV310_RS08785 () | 1640410..1640643 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| BV310_RS08790 () | 1640701..1641111 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| BV310_RS08795 () | 1641263..1641436 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| BV310_RS08800 () | 1641608..1641763 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| BV310_RS25115 () | 1641842..1641907 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| BV310_RS08805 () | 1641910..1642098 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| BV310_RS08810 () | 1642109..1642321 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| BV310_RS08815 () | 1642684..1643181 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| BV310_RS08820 () | 1643178..1643711 | - | 534 | WP_001092971.1 | lysozyme | - |
| BV310_RS08825 () | 1643708..1644019 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| BV310_RS08830 () | 1644024..1644239 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| BV310_RS25555 () | 1644459..1644629 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| BV310_RS08835 () | 1644993..1645208 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| BV310_RS08840 () | 1645509..1645721 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| BV310_RS25120 () | 1645776..1645865 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| BV310_RS08845 () | 1646143..1646895 | - | 753 | WP_001047135.1 | antitermination protein | - |
| BV310_RS08850 () | 1646909..1647958 | - | 1050 | WP_075320780.1 | DUF968 domain-containing protein | - |
| BV310_RS08855 () | 1647960..1648238 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| BV310_RS08860 () | 1648305..1648556 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| BV310_RS08865 () | 1648773..1648928 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| BV310_RS08870 () | 1649000..1649287 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| BV310_RS08875 () | 1649287..1649526 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| BV310_RS08880 () | 1649551..1649856 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| BV310_RS08890 () | 1650059..1650391 | + | 333 | WP_001301033.1 | protein FlxA | - |
| BV310_RS08895 () | 1650828..1650977 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| BV310_RS08900 () | 1651012..1651290 | - | 279 | Protein_1588 | hypothetical protein | - |
| BV310_RS08905 () | 1651274..1651504 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| BV310_RS08910 () | 1651588..1651995 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| BV310_RS08915 () | 1652162..1652317 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| BV310_RS08925 () | 1652477..1652695 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| BV310_RS08935 () | 1653263..1653451 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| BV310_RS08940 () | 1653448..1653639 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| BV310_RS08945 () | 1653732..1654499 | + | 768 | Protein_1595 | exonuclease | - |
| BV310_RS08950 () | 1654496..1655191 | + | 696 | Protein_1596 | IS3 family transposase IS2 | Transposase |
| BV310_RS25130 () | 1655205..1656362 | + | 1158 | Protein_1597 | GTP cyclohydrolase 1 ; Integrase | Integrase |
| BV310_RS08960 () | 1656382..1656492 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| BV310_RS08965 () | 1656550..1657569 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| BV310_RS08970 () | 1657581..1658795 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| BV310_RS08980 () | 1659001..1659327 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| BV310_RS08985 () | 1659462..1659803 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| BV310_RS08990 () | 1659838..1660398 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| BV310_RS08995 () | 1660401..1661111 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| BV310_RS09000 () | 1661219..1661524 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| BV310_RS09005 () | 1661723..1664149 | + | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| BV310_RS09010 () | 1664210..1666633 | + | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| BV310_RS09015 () | 1666644..1667261 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| BV310_RS09020 () | 1667263..1668117 | + | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| BV310_RS09025 () | 1668160..1668774 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| BV310_RS09030 () | 1668933..1670225 | + | 1293 | WP_071592181.1 | voltage-gated ClC-type chloride channel ClcB | - |
| BV310_RS09035 () | 1670178..1670873 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| BV310_RS09040 () | 1670998..1672218 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0.001 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0 |