NZ_CP1269321..160439

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 160439 bp
Accession: NZ_CP126932        Location: 1..160439         Organism: Escherichia coli O78:H51 strain APEC E19025       Replicon: plasmid pEND_Eco 19025-1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QQA25_RS24845 (876) 876..1145 + 270 WP_000079941.1 type II toxin-antitoxin system antitoxin YacA Antitoxin Detail
QQA25_RS24850 (1145) 1145..1423 + 279 WP_097309154.1 type II toxin-antitoxin system toxin YacB Toxin Detail
QQA25_RS24855 (1469) 1469..2317 + 849 WP_001058005.1 3'-5' exonuclease -
QQA25_RS24860 (2434) 2434..2916 + 483 WP_001311056.1 hypothetical protein -
QQA25_RS24865 (3218) 3218..3565 + 348 WP_000142437.1 DUF6404 family protein -
QQA25_RS24870 (3643) 3643..3943 - 301 Protein_6 hypothetical protein -
QQA25_RS24875 (4124) 4124..5065 + 942 WP_001312841.1 3-deoxy-7-phosphoheptulonate synthase -
QQA25_RS24880 (5025) 5025..5159 + 135 WP_249531455.1 hypothetical protein -
QQA25_RS24885 (6014) 6014..8191 + 2178 WP_001222186.1 Ferric enterobactin receptor VF
QQA25_RS24890 (8236) 8236..9192 - 957 WP_000271276.1 hypothetical protein VF
QQA25_RS24895 (9277) 9277..10506 - 1230 WP_000933675.1 Enterochelin esterase VF
QQA25_RS24900 (10610) 10610..14269 - 3660 WP_001111199.1 Multidrug efflux ATP-binding/permease protein VF
QQA25_RS24905 (14409) 14409..15524 - 1116 WP_001318220.1 Elloramycin glycosyltransferase ElmGT VF
QQA25_RS24910 (16835) 16835..17859 - 1025 Protein_14 integrase core domain-containing protein -
QQA25_RS24915 (18413) 18413..18612 + 200 Protein_15 lysis protein -
QQA25_RS24920 (18670) 18670..18963 - 294 WP_000738422.1 increased serum survival lipoprotein Iss -
QQA25_RS24925 (19590) 19590..20818 + 1229 WP_088130945.1 IS3 family transposase IS2 Transposase
QQA25_RS24930 (22042) 22042..23235 + 1194 WP_000450494.1 GTP-binding protein -
QQA25_RS24935 (23413) 23413..23562 + 150 Protein_19 IS3 family transposase IS2 Transposase
QQA25_RS24940 (23872) 23872..25261 + 1390 Protein_20 ISNCY family transposase ISKpn21 Transposase
QQA25_RS24945 (25496) 25496..26437 + 942 WP_039023641.1 hypothetical protein -
QQA25_RS24950 (26566) 26566..26760 - 195 Protein_22 IS200-IS605 family transposase IS200C Transposase
QQA25_RS24955 (27234) 27234..28604 - 1371 WP_001312828.1 efflux transporter outer membrane subunit -
QQA25_RS24960 (28608) 28608..30548 - 1941 WP_000733250.1 Macrolide export ATP-binding/permease protein MacB VF
QQA25_RS24965 (30545) 30545..31732 - 1188 WP_000928804.1 efflux RND transporter periplasmic adaptor subunit -
QQA25_RS24970 (32327) 32327..32667 - 341 Protein_26 IS3 family transposase -
QQA25_RS24975 (32713) 32713..33038 + 326 Protein_27 IS3 family transposase IS911 Transposase
QQA25_RS24985 (34538) 34538..34717 + 180 Protein_29 integrase core domain-containing protein -
QQA25_RS24990 (36014) 36014..36967 + 954 WP_000280980.1 Protease 7 VF
QQA25_RS24995 (37400) 37400..38509 + 1110 WP_000771475.1 SDR family oxidoreductase -
QQA25_RS25000 (38578) 38578..39480 + 903 WP_001312822.1 hypothetical protein VF
QQA25_RS25005 (39854) 39854..40042 + 189 WP_001312821.1 hypothetical protein -
QQA25_RS25010 (40163) 40163..40903 + 741 WP_001066954.1 tyrosine-type recombinase/integrase -
QQA25_RS25015 (41188) 41188..42165 - 978 WP_000361611.1 RepB family plasmid replication initiator protein -
QQA25_RS25020 (42911) 42911..43234 + 324 Protein_36 IS21 family transposase IS21 Transposase
QQA25_RS25025 (43236) 43236..43340 + 105 Protein_37 AAA family ATPase -
QQA25_RS25030 (43401) 43401..43914 + 514 Protein_38 DUF4113 domain-containing protein -
QQA25_RS25040 (45142) 45142..46056 + 915 WP_000949004.1 putative periplasmic iron-binding protein VF
QQA25_RS25045 (46056) 46056..46883 + 828 WP_000983712.1 Manganese transport system ATP-binding protein MntB VF
QQA25_RS25050 (46880) 46880..47737 + 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
QQA25_RS25055 (47734) 47734..48591 + 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
QQA25_RS25060 (48825) 48825..49082 - 258 Protein_44 Tn3 family transposase -
QQA25_RS25065 (49080) 49080..49493 + 414 Protein_45 phosphopyruvate hydratase -
QQA25_RS25070 (49834) 49834..50214 + 381 WP_001318207.1 fluoride efflux transporter CrcB -
QQA25_RS25075 (50594) 50594..51787 - 1194 WP_000095526.1 MFS transporter -
QQA25_RS25080 (51923) 51923..53647 + 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
QQA25_RS25085 (53648) 53648..54595 + 948 WP_039023578.1 N(6)-hydroxylysine O-acetyltransferase VF
QQA25_RS25090 (54595) 54595..56337 + 1743 WP_001015721.1 Aerobactin synthase VF
QQA25_RS25095 (56334) 56334..57667 + 1334 Protein_51 L-lysine N6-monooxygenase VF
QQA25_RS25100 (57693) 57693..59894 + 2202 WP_000973517.1 Ferric aerobactin receptor VF
QQA25_RS25105 (60419) 60419..61116 + 698 WP_223155668.1 IS1 family transposase IS1S Transposase
QQA25_RS25110 (61127) 61127..61789 - 663 WP_000163251.1 hypothetical protein -
QQA25_RS25115 (62229) 62229..62708 - 480 WP_000190054.1 hypothetical protein -
QQA25_RS25120 (62850) 62850..63275 + 426 WP_012300440.1 hypothetical protein -
QQA25_RS25125 (63892) 63892..65394 + 1503 WP_000715078.1 hypothetical protein -
QQA25_RS25130 (65644) 65644..65811 + 168 WP_000638861.1 hypothetical protein -
QQA25_RS25135 (66180) 66180..66275 + 96 WP_000609147.1 DinQ-like type I toxin DqlB -
QQA25_RS25140 (67098) 67098..67193 + 96 WP_000609144.1 DinQ-like type I toxin DqlB -
QQA25_RS25145 (67414) 67414..67590 - 177 WP_001513516.1 lasso peptide microcin J25 -
QQA25_RS25150 (67930) 67930..68556 + 627 WP_001513515.1 lasso peptide biosynthesis B2 protein -
QQA25_RS25155 (68559) 68559..70101 + 1543 Protein_63 lasso peptide isopeptide bond-forming cyclase -
QQA25_RS25160 (70104) 70104..71846 + 1743 WP_001513513.1 ABC transporter ATP-binding protein -
QQA25_RS25165 (72047) 72047..73209 + 1163 WP_085947771.1 IS3 family transposase IS3 Transposase
QQA25_RS25170 (73432) 73432..73920 - 489 Protein_66 Tn3 family transposase TnpR_TnEc1 Transposase
QQA25_RS25175 (73978) 73978..74675 + 698 WP_223230354.1 IS1 family transposase IS1S Transposase
QQA25_RS25180 (74975) 74975..76141 + 1167 WP_001238646.1 hypothetical protein VF
QQA25_RS25185 (76141) 76141..77112 + 972 WP_000817028.1 ParB/RepB/Spo0J family plasmid partition protein -
QQA25_RS25190 (77663) 77663..77832 + 170 Protein_70 hypothetical protein -
QQA25_RS25195 (77829) 77829..78176 + 348 WP_248784154.1 hypothetical protein -
QQA25_RS25200 (78245) 78245..78820 + 576 WP_289257141.1 hypothetical protein -
QQA25_RS25205 (78833) 78833..79045 + 213 WP_000092896.1 hypothetical protein -
QQA25_RS25210 (79306) 79306..80277 - 972 WP_000082154.1 IS110 family transposase ISEc32 Transposase
QQA25_RS25215 (80679) 80679..81104 + 426 WP_001198922.1 antirestriction protein -
QQA25_RS25220 (81104) 81104..81566 + 463 Protein_76 DUF1380 family protein -
QQA25_RS25225 (81566) 81566..81748 + 183 WP_001027505.1 hypothetical protein -
QQA25_RS25230 (81972) 81972..82225 - 254 Protein_78 hypothetical protein -
QQA25_RS25235 (82742) 82742..82972 + 231 WP_000218642.1 hypothetical protein -
QQA25_RS25240 (83024) 83024..84208 + 1185 WP_052266655.1 DUF3560 domain-containing protein -
QQA25_RS25245 (84256) 84256..84819 + 564 WP_001332335.1 class I SAM-dependent methyltransferase -
QQA25_RS25250 (84905) 84905..85324 - 420 Protein_82 hypothetical protein -
QQA25_RS25255 (85625) 85625..86122 + 498 Protein_83 single-stranded DNA-binding protein -
QQA25_RS25260 (86220) 86220..86453 + 234 WP_000005988.1 DUF905 family protein -
QQA25_RS25265 (86517) 86517..88466 + 1950 WP_039023646.1 ParB/RepB/Spo0J family partition protein -
QQA25_RS25270 (88506) 88506..89268 + 763 Protein_86 plasmid SOS inhibition protein A -
- (89237) 89237..89435 + 199 NuclAT_0 - Antitoxin Detail
- (89237) 89237..89435 + 199 NuclAT_0 - Antitoxin Detail
- (89237) 89237..89435 + 199 NuclAT_0 - Antitoxin Detail
- (89237) 89237..89435 + 199 NuclAT_0 - Antitoxin Detail
QQA25_RS25275 (89442) 89442..89591 + 150 Protein_87 DUF5431 family protein -
QQA25_RS25280 (89533) 89533..89658 + 126 WP_231822392.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
QQA25_RS25285 (89959) 89959..90241 - 283 Protein_89 hypothetical protein -
QQA25_RS25290 (90311) 90311..90517 + 207 WP_052908621.1 hypothetical protein -
QQA25_RS25295 (90542) 90542..90829 + 288 WP_000107542.1 hypothetical protein -
QQA25_RS25300 (90948) 90948..91769 + 822 WP_039023648.1 DUF932 domain-containing protein -
QQA25_RS25305 (92065) 92065..92667 - 603 WP_000243701.1 hypothetical protein VF
QQA25_RS25310 (93007) 93007..93390 + 384 WP_001063020.1 conjugal transfer relaxosome DNA-binding protein TraM -
QQA25_RS25315 (93581) 93581..94228 + 648 WP_015387377.1 conjugal transfer transcriptional regulator TraJ -
QQA25_RS25320 (94364) 94364..94579 + 216 WP_001352842.1 conjugal transfer relaxosome protein TraY -
QQA25_RS25325 (94622) 94622..94987 + 366 WP_000340282.1 type IV conjugative transfer system pilin TraA -
QQA25_RS25330 (95002) 95002..95313 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
QQA25_RS25335 (95335) 95335..95901 + 567 WP_000399790.1 type IV conjugative transfer system protein TraE -
QQA25_RS25340 (95888) 95888..96615 + 728 Protein_100 type-F conjugative transfer system secretin TraK -
QQA25_RS25345 (96615) 96615..98042 + 1428 WP_015387387.1 F-type conjugal transfer pilus assembly protein TraB -
QQA25_RS25350 (98032) 98032..98622 + 591 WP_000002787.1 conjugal transfer pilus-stabilizing protein TraP -
QQA25_RS25355 (98609) 98609..98929 + 321 WP_001057287.1 conjugal transfer protein TrbD -
QQA25_RS25360 (98922) 98922..99173 + 252 WP_001038342.1 conjugal transfer protein TrbG -
QQA25_RS25365 (99195) 99195..99689 + 495 WP_032174953.1 type IV conjugative transfer system lipoprotein TraV -
QQA25_RS25370 (99824) 99824..100045 + 222 WP_001278692.1 conjugal transfer protein TraR -
QQA25_RS25375 (100205) 100205..102832 + 2628 WP_001064245.1 type IV secretion system protein TraC -
QQA25_RS25380 (102829) 102829..103215 + 387 WP_000099688.1 type-F conjugative transfer system protein TrbI -
QQA25_RS25385 (103212) 103212..103844 + 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
QQA25_RS25390 (103841) 103841..104833 + 993 WP_000830183.1 conjugal transfer pilus assembly protein TraU -
QQA25_RS25395 (104842) 104842..105480 + 639 WP_000777703.1 type-F conjugative transfer system pilin assembly protein TrbC -
QQA25_RS25400 (105477) 105477..107285 + 1809 WP_039023422.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
QQA25_RS25405 (107312) 107312..107569 + 258 WP_000864318.1 conjugal transfer protein TrbE -
QQA25_RS25410 (107562) 107562..108305 + 744 WP_001030378.1 type-F conjugative transfer system pilin assembly protein TraF -
QQA25_RS25415 (108321) 108321..108668 + 348 WP_039023421.1 conjugal transfer protein TrbA -
QQA25_RS25420 (108670) 108670..108945 - 276 WP_001513501.1 hypothetical protein -
QQA25_RS25425 (109026) 109026..109310 + 285 WP_000624108.1 type-F conjugative transfer system pilin chaperone TraQ -
QQA25_RS25430 (109297) 109297..109842 + 546 WP_000059833.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
QQA25_RS25435 (109772) 109772..110113 + 342 WP_001442101.1 P-type conjugative transfer protein TrbJ -
QQA25_RS25440 (110100) 110100..110492 + 393 Protein_120 F-type conjugal transfer protein TrbF -
QQA25_RS25445 (110479) 110479..111852 + 1374 WP_000944319.1 conjugal transfer pilus assembly protein TraH -
QQA25_RS25450 (111849) 111849..114674 + 2826 WP_039023420.1 conjugal transfer mating-pair stabilization protein TraG -
QQA25_RS25455 (114671) 114671..115180 + 510 WP_021525551.1 conjugal transfer entry exclusion protein TraS -
QQA25_RS25460 (115194) 115194..115925 + 732 WP_000850422.1 conjugal transfer complement resistance protein TraT -
QQA25_RS25465 (116178) 116178..118331 + 2154 Protein_125 type IV conjugative transfer system coupling protein TraD -
QQA25_RS25470 (118340) 118340..118738 - 399 WP_000911333.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
QQA25_RS25475 (118738) 118738..118965 - 228 WP_000450520.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
QQA25_RS25480 (119047) 119047..124317 + 5271 WP_289257136.1 Multifunctional conjugation protein TraI Relaxase
QQA25_RS25485 (124337) 124337..125083 + 747 WP_000205749.1 conjugal transfer pilus acetylase TraX -
QQA25_RS25490 (125141) 125141..126001 + 861 WP_000704513.1 Quorum-quenching protein AidA VF
QQA25_RS25495 (126104) 126104..126664 + 561 WP_000139315.1 fertility inhibition protein FinO -
QQA25_RS25500 (126800) 126800..127012 + 213 WP_001299730.1 ANR family transcriptional regulator -
QQA25_RS25505 (127258) 127258..127332 + 75 Protein_133 endonuclease -
- (127588) 127588..127649 - 62 NuclAT_1 - -
- (127588) 127588..127649 - 62 NuclAT_1 - -
- (127588) 127588..127649 - 62 NuclAT_1 - -
- (127588) 127588..127649 - 62 NuclAT_1 - -
QQA25_RS25510 (127693) 127693..127854 + 162 WP_289257137.1 Hok/Gef family protein -
QQA25_RS25520 (129439) 129439..129696 + 258 WP_000083845.1 replication regulatory protein RepA -
QQA25_RS25525 (129713) 129713..129964 - 252 WP_223195197.1 replication protein RepA -
QQA25_RS25530 (129955) 129955..130002 + 48 WP_229471593.1 hypothetical protein -
QQA25_RS25535 (129995) 129995..130477 + 483 WP_001273588.1 hypothetical protein -
QQA25_RS25540 (130470) 130470..130937 + 468 Protein_140 plasmid replication initiator RepA -
QQA25_RS25545 (130990) 130990..131667 + 678 WP_001339397.1 IS66 family transposase ISCro1 Transposase
QQA25_RS25550 (131667) 131667..132014 + 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
QQA25_RS25555 (132034) 132034..133605 + 1572 WP_289257139.1 IS66 family transposase ISCro1 Transposase
QQA25_RS25560 (133636) 133636..134034 + 399 Protein_144 plasmid replication initiator RepA -
QQA25_RS25565 (134996) 134996..135247 + 252 WP_001132900.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
QQA25_RS25570 (135244) 135244..135531 + 288 WP_000222766.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
QQA25_RS25580 (137080) 137080..137247 + 168 Protein_148 helix-turn-helix transcriptional regulator -
QQA25_RS25585 (137218) 137218..137412 - 195 Protein_149 IS91 family transposase -
QQA25_RS25590 (137580) 137580..141503 + 3924 WP_039023595.1 hypothetical protein VF
QQA25_RS25595 (141615) 141615..142081 + 467 Protein_151 IS1-like element IS1A family transposase -
QQA25_RS25600 (142172) 142172..142918 - 747 WP_001016257.1 IS21 family transposase ISEc12 Transposase
QQA25_RS25605 (142933) 142933..144474 - 1542 WP_039023592.1 IS21 family transposase ISEc12 Transposase
QQA25_RS25610 (144673) 144673..144900 + 228 Protein_154 IS1 family transposase -
QQA25_RS25615 (144925) 144925..145947 - 1023 WP_000361402.1 helicase UvrD -
QQA25_RS25620 (145932) 145932..147497 - 1566 WP_001128474.1 AAA family ATPase -
QQA25_RS25625 (147572) 147572..147988 - 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
QQA25_RS25630 (147985) 147985..148215 - 231 WP_001261286.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
QQA25_RS25635 (148819) 148819..149169 + 351 WP_000493379.1 hypothetical protein -
QQA25_RS25640 (149213) 149213..149902 + 690 WP_000796228.1 hypothetical protein -
QQA25_RS25645 (149899) 149899..150690 + 792 WP_000016494.1 site-specific integrase -
QQA25_RS25650 (150868) 150868..151221 + 354 WP_000864812.1 colicin M immunity protein -
QQA25_RS25655 (151271) 151271..152086 - 816 WP_001312845.1 lipid II-degrading bacteriocin colicin M -
QQA25_RS25660 (152330) 152330..152857 + 528 WP_000203272.1 colicin B immunity protein -
QQA25_RS25665 (152875) 152875..153042 - 168 Protein_165 colicin-B -
QQA25_RS25670 (153215) 153215..153418 + 204 Protein_166 hypothetical protein -
QQA25_RS25675 (154042) 154042..155154 - 1113 WP_001300563.1 IS4 family transposase IS421 Transposase
QQA25_RS25680 (155310) 155310..155546 + 237 WP_014640552.1 colicin V immunity protein -
QQA25_RS25685 (155524) 155524..155835 + 312 WP_001259758.1 colicin V -
QQA25_RS25690 (156005) 156005..158101 - 2097 WP_001402528.1 peptidase domain-containing ABC transporter -
QQA25_RS25695 (158094) 158094..159368 - 1275 WP_000489607.1 HlyD family secretion protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance