MGE detailed information
MGE type: Conjugative plasmid MGE length: 160439 bp
Accession: NZ_CP126932 Location: 1..160439 Organism: Escherichia coli O78:H51 strain APEC E19025 Replicon: plasmid pEND_Eco 19025-1
Accession: NZ_CP126932 Location: 1..160439 Organism: Escherichia coli O78:H51 strain APEC E19025 Replicon: plasmid pEND_Eco 19025-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
QQA25_RS24845 (876) | 876..1145 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
QQA25_RS24850 (1145) | 1145..1423 | + | 279 | WP_097309154.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
QQA25_RS24855 (1469) | 1469..2317 | + | 849 | WP_001058005.1 | 3'-5' exonuclease | - |
QQA25_RS24860 (2434) | 2434..2916 | + | 483 | WP_001311056.1 | hypothetical protein | - |
QQA25_RS24865 (3218) | 3218..3565 | + | 348 | WP_000142437.1 | DUF6404 family protein | - |
QQA25_RS24870 (3643) | 3643..3943 | - | 301 | Protein_6 | hypothetical protein | - |
QQA25_RS24875 (4124) | 4124..5065 | + | 942 | WP_001312841.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
QQA25_RS24880 (5025) | 5025..5159 | + | 135 | WP_249531455.1 | hypothetical protein | - |
QQA25_RS24885 (6014) | 6014..8191 | + | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
QQA25_RS24890 (8236) | 8236..9192 | - | 957 | WP_000271276.1 | hypothetical protein | VF |
QQA25_RS24895 (9277) | 9277..10506 | - | 1230 | WP_000933675.1 | Enterochelin esterase | VF |
QQA25_RS24900 (10610) | 10610..14269 | - | 3660 | WP_001111199.1 | Multidrug efflux ATP-binding/permease protein | VF |
QQA25_RS24905 (14409) | 14409..15524 | - | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
QQA25_RS24910 (16835) | 16835..17859 | - | 1025 | Protein_14 | integrase core domain-containing protein | - |
QQA25_RS24915 (18413) | 18413..18612 | + | 200 | Protein_15 | lysis protein | - |
QQA25_RS24920 (18670) | 18670..18963 | - | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
QQA25_RS24925 (19590) | 19590..20818 | + | 1229 | WP_088130945.1 | IS3 family transposase IS2 | Transposase |
QQA25_RS24930 (22042) | 22042..23235 | + | 1194 | WP_000450494.1 | GTP-binding protein | - |
QQA25_RS24935 (23413) | 23413..23562 | + | 150 | Protein_19 | IS3 family transposase IS2 | Transposase |
QQA25_RS24940 (23872) | 23872..25261 | + | 1390 | Protein_20 | ISNCY family transposase ISKpn21 | Transposase |
QQA25_RS24945 (25496) | 25496..26437 | + | 942 | WP_039023641.1 | hypothetical protein | - |
QQA25_RS24950 (26566) | 26566..26760 | - | 195 | Protein_22 | IS200-IS605 family transposase IS200C | Transposase |
QQA25_RS24955 (27234) | 27234..28604 | - | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
QQA25_RS24960 (28608) | 28608..30548 | - | 1941 | WP_000733250.1 | Macrolide export ATP-binding/permease protein MacB | VF |
QQA25_RS24965 (30545) | 30545..31732 | - | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
QQA25_RS24970 (32327) | 32327..32667 | - | 341 | Protein_26 | IS3 family transposase | - |
QQA25_RS24975 (32713) | 32713..33038 | + | 326 | Protein_27 | IS3 family transposase IS911 | Transposase |
QQA25_RS24985 (34538) | 34538..34717 | + | 180 | Protein_29 | integrase core domain-containing protein | - |
QQA25_RS24990 (36014) | 36014..36967 | + | 954 | WP_000280980.1 | Protease 7 | VF |
QQA25_RS24995 (37400) | 37400..38509 | + | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
QQA25_RS25000 (38578) | 38578..39480 | + | 903 | WP_001312822.1 | hypothetical protein | VF |
QQA25_RS25005 (39854) | 39854..40042 | + | 189 | WP_001312821.1 | hypothetical protein | - |
QQA25_RS25010 (40163) | 40163..40903 | + | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
QQA25_RS25015 (41188) | 41188..42165 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
QQA25_RS25020 (42911) | 42911..43234 | + | 324 | Protein_36 | IS21 family transposase IS21 | Transposase |
QQA25_RS25025 (43236) | 43236..43340 | + | 105 | Protein_37 | AAA family ATPase | - |
QQA25_RS25030 (43401) | 43401..43914 | + | 514 | Protein_38 | DUF4113 domain-containing protein | - |
QQA25_RS25040 (45142) | 45142..46056 | + | 915 | WP_000949004.1 | putative periplasmic iron-binding protein | VF |
QQA25_RS25045 (46056) | 46056..46883 | + | 828 | WP_000983712.1 | Manganese transport system ATP-binding protein MntB | VF |
QQA25_RS25050 (46880) | 46880..47737 | + | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
QQA25_RS25055 (47734) | 47734..48591 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
QQA25_RS25060 (48825) | 48825..49082 | - | 258 | Protein_44 | Tn3 family transposase | - |
QQA25_RS25065 (49080) | 49080..49493 | + | 414 | Protein_45 | phosphopyruvate hydratase | - |
QQA25_RS25070 (49834) | 49834..50214 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
QQA25_RS25075 (50594) | 50594..51787 | - | 1194 | WP_000095526.1 | MFS transporter | - |
QQA25_RS25080 (51923) | 51923..53647 | + | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
QQA25_RS25085 (53648) | 53648..54595 | + | 948 | WP_039023578.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
QQA25_RS25090 (54595) | 54595..56337 | + | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
QQA25_RS25095 (56334) | 56334..57667 | + | 1334 | Protein_51 | L-lysine N6-monooxygenase | VF |
QQA25_RS25100 (57693) | 57693..59894 | + | 2202 | WP_000973517.1 | Ferric aerobactin receptor | VF |
QQA25_RS25105 (60419) | 60419..61116 | + | 698 | WP_223155668.1 | IS1 family transposase IS1S | Transposase |
QQA25_RS25110 (61127) | 61127..61789 | - | 663 | WP_000163251.1 | hypothetical protein | - |
QQA25_RS25115 (62229) | 62229..62708 | - | 480 | WP_000190054.1 | hypothetical protein | - |
QQA25_RS25120 (62850) | 62850..63275 | + | 426 | WP_012300440.1 | hypothetical protein | - |
QQA25_RS25125 (63892) | 63892..65394 | + | 1503 | WP_000715078.1 | hypothetical protein | - |
QQA25_RS25130 (65644) | 65644..65811 | + | 168 | WP_000638861.1 | hypothetical protein | - |
QQA25_RS25135 (66180) | 66180..66275 | + | 96 | WP_000609147.1 | DinQ-like type I toxin DqlB | - |
QQA25_RS25140 (67098) | 67098..67193 | + | 96 | WP_000609144.1 | DinQ-like type I toxin DqlB | - |
QQA25_RS25145 (67414) | 67414..67590 | - | 177 | WP_001513516.1 | lasso peptide microcin J25 | - |
QQA25_RS25150 (67930) | 67930..68556 | + | 627 | WP_001513515.1 | lasso peptide biosynthesis B2 protein | - |
QQA25_RS25155 (68559) | 68559..70101 | + | 1543 | Protein_63 | lasso peptide isopeptide bond-forming cyclase | - |
QQA25_RS25160 (70104) | 70104..71846 | + | 1743 | WP_001513513.1 | ABC transporter ATP-binding protein | - |
QQA25_RS25165 (72047) | 72047..73209 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
QQA25_RS25170 (73432) | 73432..73920 | - | 489 | Protein_66 | Tn3 family transposase TnpR_TnEc1 | Transposase |
QQA25_RS25175 (73978) | 73978..74675 | + | 698 | WP_223230354.1 | IS1 family transposase IS1S | Transposase |
QQA25_RS25180 (74975) | 74975..76141 | + | 1167 | WP_001238646.1 | hypothetical protein | VF |
QQA25_RS25185 (76141) | 76141..77112 | + | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
QQA25_RS25190 (77663) | 77663..77832 | + | 170 | Protein_70 | hypothetical protein | - |
QQA25_RS25195 (77829) | 77829..78176 | + | 348 | WP_248784154.1 | hypothetical protein | - |
QQA25_RS25200 (78245) | 78245..78820 | + | 576 | WP_289257141.1 | hypothetical protein | - |
QQA25_RS25205 (78833) | 78833..79045 | + | 213 | WP_000092896.1 | hypothetical protein | - |
QQA25_RS25210 (79306) | 79306..80277 | - | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
QQA25_RS25215 (80679) | 80679..81104 | + | 426 | WP_001198922.1 | antirestriction protein | - |
QQA25_RS25220 (81104) | 81104..81566 | + | 463 | Protein_76 | DUF1380 family protein | - |
QQA25_RS25225 (81566) | 81566..81748 | + | 183 | WP_001027505.1 | hypothetical protein | - |
QQA25_RS25230 (81972) | 81972..82225 | - | 254 | Protein_78 | hypothetical protein | - |
QQA25_RS25235 (82742) | 82742..82972 | + | 231 | WP_000218642.1 | hypothetical protein | - |
QQA25_RS25240 (83024) | 83024..84208 | + | 1185 | WP_052266655.1 | DUF3560 domain-containing protein | - |
QQA25_RS25245 (84256) | 84256..84819 | + | 564 | WP_001332335.1 | class I SAM-dependent methyltransferase | - |
QQA25_RS25250 (84905) | 84905..85324 | - | 420 | Protein_82 | hypothetical protein | - |
QQA25_RS25255 (85625) | 85625..86122 | + | 498 | Protein_83 | single-stranded DNA-binding protein | - |
QQA25_RS25260 (86220) | 86220..86453 | + | 234 | WP_000005988.1 | DUF905 family protein | - |
QQA25_RS25265 (86517) | 86517..88466 | + | 1950 | WP_039023646.1 | ParB/RepB/Spo0J family partition protein | - |
QQA25_RS25270 (88506) | 88506..89268 | + | 763 | Protein_86 | plasmid SOS inhibition protein A | - |
- (89237) | 89237..89435 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
- (89237) | 89237..89435 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
- (89237) | 89237..89435 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
- (89237) | 89237..89435 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
QQA25_RS25275 (89442) | 89442..89591 | + | 150 | Protein_87 | DUF5431 family protein | - |
QQA25_RS25280 (89533) | 89533..89658 | + | 126 | WP_231822392.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
QQA25_RS25285 (89959) | 89959..90241 | - | 283 | Protein_89 | hypothetical protein | - |
QQA25_RS25290 (90311) | 90311..90517 | + | 207 | WP_052908621.1 | hypothetical protein | - |
QQA25_RS25295 (90542) | 90542..90829 | + | 288 | WP_000107542.1 | hypothetical protein | - |
QQA25_RS25300 (90948) | 90948..91769 | + | 822 | WP_039023648.1 | DUF932 domain-containing protein | - |
QQA25_RS25305 (92065) | 92065..92667 | - | 603 | WP_000243701.1 | hypothetical protein | VF |
QQA25_RS25310 (93007) | 93007..93390 | + | 384 | WP_001063020.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
QQA25_RS25315 (93581) | 93581..94228 | + | 648 | WP_015387377.1 | conjugal transfer transcriptional regulator TraJ | - |
QQA25_RS25320 (94364) | 94364..94579 | + | 216 | WP_001352842.1 | conjugal transfer relaxosome protein TraY | - |
QQA25_RS25325 (94622) | 94622..94987 | + | 366 | WP_000340282.1 | type IV conjugative transfer system pilin TraA | - |
QQA25_RS25330 (95002) | 95002..95313 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
QQA25_RS25335 (95335) | 95335..95901 | + | 567 | WP_000399790.1 | type IV conjugative transfer system protein TraE | - |
QQA25_RS25340 (95888) | 95888..96615 | + | 728 | Protein_100 | type-F conjugative transfer system secretin TraK | - |
QQA25_RS25345 (96615) | 96615..98042 | + | 1428 | WP_015387387.1 | F-type conjugal transfer pilus assembly protein TraB | - |
QQA25_RS25350 (98032) | 98032..98622 | + | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
QQA25_RS25355 (98609) | 98609..98929 | + | 321 | WP_001057287.1 | conjugal transfer protein TrbD | - |
QQA25_RS25360 (98922) | 98922..99173 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
QQA25_RS25365 (99195) | 99195..99689 | + | 495 | WP_032174953.1 | type IV conjugative transfer system lipoprotein TraV | - |
QQA25_RS25370 (99824) | 99824..100045 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
QQA25_RS25375 (100205) | 100205..102832 | + | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
QQA25_RS25380 (102829) | 102829..103215 | + | 387 | WP_000099688.1 | type-F conjugative transfer system protein TrbI | - |
QQA25_RS25385 (103212) | 103212..103844 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
QQA25_RS25390 (103841) | 103841..104833 | + | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
QQA25_RS25395 (104842) | 104842..105480 | + | 639 | WP_000777703.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
QQA25_RS25400 (105477) | 105477..107285 | + | 1809 | WP_039023422.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
QQA25_RS25405 (107312) | 107312..107569 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
QQA25_RS25410 (107562) | 107562..108305 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
QQA25_RS25415 (108321) | 108321..108668 | + | 348 | WP_039023421.1 | conjugal transfer protein TrbA | - |
QQA25_RS25420 (108670) | 108670..108945 | - | 276 | WP_001513501.1 | hypothetical protein | - |
QQA25_RS25425 (109026) | 109026..109310 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
QQA25_RS25430 (109297) | 109297..109842 | + | 546 | WP_000059833.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
QQA25_RS25435 (109772) | 109772..110113 | + | 342 | WP_001442101.1 | P-type conjugative transfer protein TrbJ | - |
QQA25_RS25440 (110100) | 110100..110492 | + | 393 | Protein_120 | F-type conjugal transfer protein TrbF | - |
QQA25_RS25445 (110479) | 110479..111852 | + | 1374 | WP_000944319.1 | conjugal transfer pilus assembly protein TraH | - |
QQA25_RS25450 (111849) | 111849..114674 | + | 2826 | WP_039023420.1 | conjugal transfer mating-pair stabilization protein TraG | - |
QQA25_RS25455 (114671) | 114671..115180 | + | 510 | WP_021525551.1 | conjugal transfer entry exclusion protein TraS | - |
QQA25_RS25460 (115194) | 115194..115925 | + | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
QQA25_RS25465 (116178) | 116178..118331 | + | 2154 | Protein_125 | type IV conjugative transfer system coupling protein TraD | - |
QQA25_RS25470 (118340) | 118340..118738 | - | 399 | WP_000911333.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
QQA25_RS25475 (118738) | 118738..118965 | - | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
QQA25_RS25480 (119047) | 119047..124317 | + | 5271 | WP_289257136.1 | Multifunctional conjugation protein TraI | Relaxase |
QQA25_RS25485 (124337) | 124337..125083 | + | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
QQA25_RS25490 (125141) | 125141..126001 | + | 861 | WP_000704513.1 | Quorum-quenching protein AidA | VF |
QQA25_RS25495 (126104) | 126104..126664 | + | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
QQA25_RS25500 (126800) | 126800..127012 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
QQA25_RS25505 (127258) | 127258..127332 | + | 75 | Protein_133 | endonuclease | - |
- (127588) | 127588..127649 | - | 62 | NuclAT_1 | - | - |
- (127588) | 127588..127649 | - | 62 | NuclAT_1 | - | - |
- (127588) | 127588..127649 | - | 62 | NuclAT_1 | - | - |
- (127588) | 127588..127649 | - | 62 | NuclAT_1 | - | - |
QQA25_RS25510 (127693) | 127693..127854 | + | 162 | WP_289257137.1 | Hok/Gef family protein | - |
QQA25_RS25520 (129439) | 129439..129696 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
QQA25_RS25525 (129713) | 129713..129964 | - | 252 | WP_223195197.1 | replication protein RepA | - |
QQA25_RS25530 (129955) | 129955..130002 | + | 48 | WP_229471593.1 | hypothetical protein | - |
QQA25_RS25535 (129995) | 129995..130477 | + | 483 | WP_001273588.1 | hypothetical protein | - |
QQA25_RS25540 (130470) | 130470..130937 | + | 468 | Protein_140 | plasmid replication initiator RepA | - |
QQA25_RS25545 (130990) | 130990..131667 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
QQA25_RS25550 (131667) | 131667..132014 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
QQA25_RS25555 (132034) | 132034..133605 | + | 1572 | WP_289257139.1 | IS66 family transposase ISCro1 | Transposase |
QQA25_RS25560 (133636) | 133636..134034 | + | 399 | Protein_144 | plasmid replication initiator RepA | - |
QQA25_RS25565 (134996) | 134996..135247 | + | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
QQA25_RS25570 (135244) | 135244..135531 | + | 288 | WP_000222766.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
QQA25_RS25580 (137080) | 137080..137247 | + | 168 | Protein_148 | helix-turn-helix transcriptional regulator | - |
QQA25_RS25585 (137218) | 137218..137412 | - | 195 | Protein_149 | IS91 family transposase | - |
QQA25_RS25590 (137580) | 137580..141503 | + | 3924 | WP_039023595.1 | hypothetical protein | VF |
QQA25_RS25595 (141615) | 141615..142081 | + | 467 | Protein_151 | IS1-like element IS1A family transposase | - |
QQA25_RS25600 (142172) | 142172..142918 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
QQA25_RS25605 (142933) | 142933..144474 | - | 1542 | WP_039023592.1 | IS21 family transposase ISEc12 | Transposase |
QQA25_RS25610 (144673) | 144673..144900 | + | 228 | Protein_154 | IS1 family transposase | - |
QQA25_RS25615 (144925) | 144925..145947 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
QQA25_RS25620 (145932) | 145932..147497 | - | 1566 | WP_001128474.1 | AAA family ATPase | - |
QQA25_RS25625 (147572) | 147572..147988 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
QQA25_RS25630 (147985) | 147985..148215 | - | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
QQA25_RS25635 (148819) | 148819..149169 | + | 351 | WP_000493379.1 | hypothetical protein | - |
QQA25_RS25640 (149213) | 149213..149902 | + | 690 | WP_000796228.1 | hypothetical protein | - |
QQA25_RS25645 (149899) | 149899..150690 | + | 792 | WP_000016494.1 | site-specific integrase | - |
QQA25_RS25650 (150868) | 150868..151221 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
QQA25_RS25655 (151271) | 151271..152086 | - | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
QQA25_RS25660 (152330) | 152330..152857 | + | 528 | WP_000203272.1 | colicin B immunity protein | - |
QQA25_RS25665 (152875) | 152875..153042 | - | 168 | Protein_165 | colicin-B | - |
QQA25_RS25670 (153215) | 153215..153418 | + | 204 | Protein_166 | hypothetical protein | - |
QQA25_RS25675 (154042) | 154042..155154 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
QQA25_RS25680 (155310) | 155310..155546 | + | 237 | WP_014640552.1 | colicin V immunity protein | - |
QQA25_RS25685 (155524) | 155524..155835 | + | 312 | WP_001259758.1 | colicin V | - |
QQA25_RS25690 (156005) | 156005..158101 | - | 2097 | WP_001402528.1 | peptidase domain-containing ABC transporter | - |
QQA25_RS25695 (158094) | 158094..159368 | - | 1275 | WP_000489607.1 | HlyD family secretion protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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