MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 99789 bp
Accession: NZ_CP124375 Location: 1..99789 Organism: Escherichia coli strain AVS0578 Replicon: plasmid unnamed
Accession: NZ_CP124375 Location: 1..99789 Organism: Escherichia coli strain AVS0578 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP97_RS25370 (219) | 219..872 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| QJP97_RS25375 (965) | 965..1222 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QJP97_RS25380 (1155) | 1155..1556 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QJP97_RS25385 (1693) | 1693..4590 | - | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| QJP97_RS25390 (4685) | 4685..5290 | + | 606 | WP_000509965.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| QJP97_RS25395 (5314) | 5314..6063 | - | 750 | Protein_5 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| QJP97_RS25400 (6067) | 6067..6459 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| QJP97_RS25405 (6597) | 6597..7481 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| QJP97_RS25410 (7513) | 7513..8712 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| QJP97_RS25415 (8818) | 8818..9468 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| QJP97_RS25420 (9500) | 9500..9742 | - | 243 | WP_032140899.1 | hypothetical protein | - |
| QJP97_RS25425 (9784) | 9784..11298 | - | 1515 | Protein_11 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| QJP97_RS25430 (11364) | 11364..12068 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QJP97_RS25435 (12212) | 12212..12766 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| QJP97_RS25440 (12897) | 12897..13727 | + | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| QJP97_RS25445 (13865) | 13865..14305 | + | 441 | Protein_15 | CatB-related O-acetyltransferase | - |
| QJP97_RS25450 (14359) | 14359..15063 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QJP97_RS25455 (15140) | 15140..17359 | - | 2220 | Protein_17 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QJP97_RS25460 (17385) | 17385..17717 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| QJP97_RS25465 (17764) | 17764..18639 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| QJP97_RS25470 (18775) | 18775..19479 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QJP97_RS25475 (19532) | 19532..19699 | - | 168 | Protein_21 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| QJP97_RS25480 (19825) | 19825..20175 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| QJP97_RS25485 (20378) | 20378..21391 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| QJP97_RS25490 (21549) | 21549..22022 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| QJP97_RS25495 (22153) | 22153..22941 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| QJP97_RS25500 (23147) | 23147..23494 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| QJP97_RS25505 (23488) | 23488..24327 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| QJP97_RS25510 (24455) | 24455..24658 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| QJP97_RS25515 (24814) | 24814..26019 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| QJP97_RS25520 (26030) | 26030..26335 | + | 306 | WP_000130000.1 | Transcriptional regulator | Relaxase |
| QJP97_RS25525 (26379) | 26379..26444 | + | 66 | Protein_31 | EAL domain-containing protein | - |
| QJP97_RS25530 (26562) | 26562..27326 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| QJP97_RS25535 (27819) | 27819..28403 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| QJP97_RS25540 (28403) | 28403..29641 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| QJP97_RS25545 (29638) | 29638..30543 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| QJP97_RS25550 (30665) | 30665..31369 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QJP97_RS25555 (31595) | 31595..32410 | + | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| QJP97_RS25560 (32757) | 32757..34643 | + | 1887 | WP_000118029.1 | FTR1 family protein | - |
| QJP97_RS25565 (34684) | 34684..35211 | + | 528 | WP_000178050.1 | iron transporter | - |
| QJP97_RS25570 (35315) | 35315..36694 | + | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| QJP97_RS25575 (36697) | 36697..37980 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| QJP97_RS25580 (37970) | 37970..39100 | + | 1131 | WP_000729220.1 | ABC transporter permease | - |
| QJP97_RS25585 (39105) | 39105..39800 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| QJP97_RS25590 (39787) | 39787..40272 | + | 486 | WP_001267177.1 | TlpA disulfide reductase family protein | - |
| QJP97_RS25595 (40297) | 40297..40782 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| QJP97_RS25600 (40904) | 40904..41434 | + | 531 | Protein_46 | histidine-type phosphatase | - |
| QJP97_RS25605 (41492) | 41492..42196 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QJP97_RS25610 (42221) | 42221..43416 | + | 1196 | WP_282526070.1 | IS3 family transposase IS629 | Transposase |
| QJP97_RS25615 (43459) | 43459..43671 | + | 213 | WP_013279377.1 | Tn3 family transposase ISPsy39 | Transposase |
| QJP97_RS25620 (43748) | 43748..44056 | + | 309 | Protein_50 | IS4 family transposase ISEc13 | Transposase |
| QJP97_RS25625 (44115) | 44115..45425 | - | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| QJP97_RS25630 (45418) | 45418..46491 | - | 1074 | WP_000950177.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| QJP97_RS25635 (46497) | 46497..47321 | - | 825 | Protein_53 | phosphodiesterase | - |
| QJP97_RS25640 (47332) | 47332..48219 | - | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| QJP97_RS25645 (48209) | 48209..49087 | - | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| QJP97_RS25650 (49218) | 49218..49658 | - | 441 | Protein_56 | zinc-binding dehydrogenase | - |
| QJP97_RS25655 (50059) | 50059..50478 | + | 420 | WP_282526071.1 | dihydrodipicolinate synthase family protein | - |
| QJP97_RS25660 (50549) | 50549..50974 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJP97_RS25665 (50971) | 50971..51321 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJP97_RS25670 (51352) | 51352..52965 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJP97_RS25675 (53001) | 53001..53489 | + | 489 | WP_282526073.1 | dihydrodipicolinate synthase family protein | - |
| QJP97_RS25680 (53514) | 53514..53894 | + | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| QJP97_RS25685 (53927) | 53927..54892 | + | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| QJP97_RS25690 (54938) | 54938..55690 | - | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| QJP97_RS25695 (56295) | 56295..56579 | + | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| QJP97_RS25700 (56579) | 56579..56854 | + | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QJP97_RS25705 (56960) | 56960..57163 | + | 204 | Protein_67 | hypothetical protein | - |
| QJP97_RS25710 (57288) | 57288..57416 | - | 129 | Protein_68 | IS481 family transposase | - |
| QJP97_RS25715 (57449) | 57449..58618 | - | 1170 | WP_001072355.1 | hypothetical protein | - |
| QJP97_RS25720 (59150) | 59150..59418 | + | 269 | Protein_70 | type II toxin-antitoxin system ParD family antitoxin | - |
| QJP97_RS25725 (59405) | 59405..59673 | + | 269 | Protein_71 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QJP97_RS25730 (59707) | 59707..60404 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| QJP97_RS25735 (60658) | 60658..61680 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
| QJP97_RS25740 (61665) | 61665..63230 | - | 1566 | WP_001128474.1 | AAA family ATPase | - |
| QJP97_RS25745 (63305) | 63305..63721 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QJP97_RS25750 (63718) | 63718..63948 | - | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QJP97_RS25755 (64329) | 64329..68123 | + | 3795 | WP_001144732.1 | hypothetical protein | - |
| QJP97_RS25760 (68168) | 68168..68584 | - | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QJP97_RS25765 (68581) | 68581..68811 | - | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QJP97_RS25770 (69076) | 69076..69576 | + | 501 | WP_000528932.1 | HEPN family nuclease | - |
| QJP97_RS25775 (69589) | 69589..70362 | + | 774 | WP_000905949.1 | hypothetical protein | - |
| QJP97_RS25780 (70573) | 70573..72186 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJP97_RS25785 (72217) | 72217..72567 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJP97_RS25790 (72564) | 72564..72989 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJP97_RS25795 (73081) | 73081..74202 | + | 1122 | WP_012783980.1 | DUF3800 domain-containing protein | - |
| QJP97_RS25800 (74236) | 74236..74748 | - | 513 | WP_000151784.1 | hypothetical protein | - |
| QJP97_RS25805 (75294) | 75294..75512 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QJP97_RS25810 (75514) | 75514..75819 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QJP97_RS25815 (75820) | 75820..76626 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| QJP97_RS25820 (77400) | 77400..78155 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| QJP97_RS25825 (78743) | 78743..79909 | + | 1167 | WP_000772446.1 | hypothetical protein | VF |
| QJP97_RS25830 (79909) | 79909..80880 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QJP97_RS25835 (81575) | 81575..82476 | + | 902 | Protein_93 | DUF1281 domain-containing protein | - |
| QJP97_RS25840 (82473) | 82473..82784 | + | 312 | WP_011254640.1 | hypothetical protein | - |
| QJP97_RS25845 (82861) | 82861..83544 | + | 684 | WP_000086185.1 | DNA methylase | - |
| QJP97_RS25850 (83545) | 83545..83766 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| QJP97_RS25855 (83696) | 83696..84214 | + | 519 | WP_123325260.1 | DUF1380 family protein | - |
| QJP97_RS25860 (84265) | 84265..85041 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| QJP97_RS25865 (85457) | 85457..85882 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| QJP97_RS25870 (85929) | 85929..86351 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| QJP97_RS25875 (86348) | 86348..86539 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| QJP97_RS25880 (87573) | 87573..87803 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| QJP97_RS25885 (87855) | 87855..89216 | + | 1362 | WP_000170713.1 | DUF3560 domain-containing protein | - |
| QJP97_RS25890 (89263) | 89263..89826 | + | 564 | WP_015059007.1 | class I SAM-dependent methyltransferase | - |
| QJP97_RS25895 (89826) | 89826..90050 | + | 225 | WP_021538344.1 | hypothetical protein | - |
| QJP97_RS25900 (89978) | 89978..90220 | + | 243 | WP_001365577.1 | hypothetical protein | - |
| QJP97_RS25905 (91342) | 91342..93243 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| QJP97_RS25910 (93393) | 93393..93878 | + | 486 | WP_042029316.1 | single-stranded DNA-binding protein | - |
| QJP97_RS25915 (93934) | 93934..94167 | + | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| QJP97_RS25920 (94226) | 94226..96184 | + | 1959 | WP_282526072.1 | ParB/RepB/Spo0J family partition protein | - |
| QJP97_RS25925 (96239) | 96239..96673 | + | 435 | WP_000845901.1 | conjugation system SOS inhibitor PsiB | - |
| QJP97_RS25930 (96670) | 96670..97432 | + | 763 | Protein_112 | plasmid SOS inhibition protein A | - |
| QJP97_RS25935 (97401) | 97401..97589 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - (97401) | 97401..97625 | + | 225 | NuclAT_0 | - | - |
| - (97401) | 97401..97625 | + | 225 | NuclAT_0 | - | - |
| - (97401) | 97401..97625 | + | 225 | NuclAT_0 | - | - |
| - (97401) | 97401..97625 | + | 225 | NuclAT_0 | - | - |
| QJP97_RS25940 (97611) | 97611..97760 | + | 150 | Protein_114 | plasmid maintenance protein Mok | - |
| QJP97_RS25945 (97702) | 97702..97827 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QJP97_RS25950 (98047) | 98047..98277 | + | 231 | WP_001426396.1 | hypothetical protein | - |
| QJP97_RS25955 (98275) | 98275..98448 | - | 174 | Protein_117 | hypothetical protein | - |
| QJP97_RS25960 (98746) | 98746..99033 | + | 288 | WP_000107537.1 | hypothetical protein | - |
| QJP97_RS25965 (99154) | 99154..99789 | + | 636 | WP_139731638.1 | DUF932 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|