MGE detailed information
MGE type: Conjugative plasmid MGE length: 121553 bp
Accession: NZ_CP122509 Location: 1..121553 Organism: Escherichia coli strain W444 Replicon: plasmid unnamed2
Accession: NZ_CP122509 Location: 1..121553 Organism: Escherichia coli strain W444 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QC806_RS24600 (1) | 1..861 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QC806_RS24605 (1031) | 1031..1786 | + | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| QC806_RS24610 (1981) | 1981..2685 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QC806_RS24615 (3008) | 3008..4492 | - | 1485 | WP_032152108.1 | IS91 family transposase ISVsa3 | Transposase |
| QC806_RS24620 (4767) | 4767..5108 | - | 342 | WP_023909256.1 | 60 kDa chaperonin | VF |
| QC806_RS24625 (5069) | 5069..5518 | - | 450 | WP_013362817.1 | hypothetical protein | - |
| QC806_RS24630 (6148) | 6148..6885 | - | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
| QC806_RS24635 (7011) | 7011..7106 | - | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| QC806_RS24640 (7241) | 7241..7945 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QC806_RS24645 (8011) | 8011..8556 | + | 546 | Protein_9 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QC806_RS24650 (8592) | 8592..9007 | - | 416 | Protein_10 | IS1-like element IS1B family transposase | - |
| QC806_RS24655 (9256) | 9256..9657 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QC806_RS24660 (9590) | 9590..9847 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QC806_RS24665 (9940) | 9940..10593 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| QC806_RS24670 (10691) | 10691..10831 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| QC806_RS24675 (11407) | 11407..12978 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| QC806_RS24680 (12998) | 12998..13345 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| QC806_RS24685 (13350) | 13350..14020 | - | 671 | Protein_17 | IS66 family transposase ISCro1 | Transposase |
| QC806_RS24690 (14213) | 14213..14917 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QC806_RS24695 (14970) | 14970..15164 | + | 195 | Protein_19 | IS6 family transposase | - |
| QC806_RS24700 (15657) | 15657..16241 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| QC806_RS24705 (16241) | 16241..17479 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| QC806_RS24710 (17476) | 17476..18381 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| QC806_RS24715 (18503) | 18503..19207 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QC806_RS24720 (19268) | 19268..19537 | + | 270 | Protein_24 | 2-keto-3-deoxygluconate permease | - |
| QC806_RS24725 (19583) | 19583..20335 | - | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| QC806_RS24730 (20940) | 20940..21224 | + | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| QC806_RS24735 (21224) | 21224..21499 | + | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QC806_RS24740 (21605) | 21605..21808 | + | 204 | Protein_28 | hypothetical protein | - |
| QC806_RS24745 (21933) | 21933..22061 | - | 129 | Protein_29 | IS481 family transposase | - |
| QC806_RS24750 (22094) | 22094..23263 | - | 1170 | WP_001072355.1 | hypothetical protein | - |
| QC806_RS24760 (25131) | 25131..25399 | + | 269 | Protein_32 | type II toxin-antitoxin system ParD family antitoxin | - |
| QC806_RS24765 (25386) | 25386..25675 | + | 290 | Protein_33 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QC806_RS24770 (25742) | 25742..25924 | + | 183 | WP_042344623.1 | hypothetical protein | - |
| QC806_RS24775 (26045) | 26045..26785 | + | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| QC806_RS24780 (27070) | 27070..28047 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| QC806_RS24785 (28793) | 28793..29077 | + | 285 | Protein_37 | IS21 family transposase IS21 | Transposase |
| QC806_RS24790 (29133) | 29133..29830 | + | 698 | WP_223155668.1 | IS1 family transposase IS1S | Transposase |
| QC806_RS24795 (30084) | 30084..31106 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
| QC806_RS24800 (31091) | 31091..32656 | - | 1566 | WP_001128474.1 | AAA family ATPase | - |
| QC806_RS24805 (32731) | 32731..33147 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QC806_RS24810 (33144) | 33144..33374 | - | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QC806_RS24815 (33755) | 33755..37549 | + | 3795 | WP_001144732.1 | hypothetical protein | - |
| QC806_RS24820 (37594) | 37594..38010 | - | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QC806_RS24825 (38007) | 38007..38237 | - | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QC806_RS24830 (38502) | 38502..39002 | + | 501 | WP_000528931.1 | HEPN family nuclease | - |
| QC806_RS24835 (39015) | 39015..39641 | + | 627 | Protein_47 | hypothetical protein | - |
| QC806_RS24840 (39814) | 39814..41013 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| QC806_RS24845 (41023) | 41023..41211 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| QC806_RS24850 (41643) | 41643..42776 | + | 1134 | WP_001542067.1 | DUF3800 domain-containing protein | - |
| QC806_RS24855 (42810) | 42810..43322 | - | 513 | WP_000151784.1 | hypothetical protein | - |
| QC806_RS24860 (43889) | 43889..44107 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QC806_RS24865 (44109) | 44109..44414 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QC806_RS24870 (44415) | 44415..45221 | + | 807 | WP_284632204.1 | site-specific integrase | - |
| QC806_RS24875 (45995) | 45995..46750 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| QC806_RS24880 (47338) | 47338..48504 | + | 1167 | WP_000772446.1 | hypothetical protein | VF |
| QC806_RS24885 (48504) | 48504..49475 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QC806_RS24890 (50342) | 50342..51244 | + | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| QC806_RS24895 (51241) | 51241..51552 | + | 312 | WP_011254640.1 | hypothetical protein | - |
| QC806_RS24900 (51629) | 51629..52312 | + | 684 | WP_171883504.1 | DNA methylase | - |
| QC806_RS24905 (52313) | 52313..52534 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| QC806_RS24910 (52464) | 52464..52982 | + | 519 | WP_223350510.1 | DUF1380 family protein | - |
| QC806_RS24915 (53027) | 53027..53797 | + | 771 | WP_012783922.1 | hypothetical protein | - |
| QC806_RS24920 (54210) | 54210..54635 | + | 426 | WP_001198889.1 | antirestriction protein | - |
| QC806_RS24925 (54682) | 54682..55104 | + | 423 | WP_000271703.1 | DUF1380 family protein | - |
| QC806_RS24930 (55101) | 55101..55292 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| QC806_RS24935 (55565) | 55565..55813 | - | 249 | WP_077249352.1 | hypothetical protein | - |
| QC806_RS24940 (56330) | 56330..56560 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| QC806_RS24945 (56612) | 56612..57973 | + | 1362 | WP_284632205.1 | DUF3560 domain-containing protein | - |
| QC806_RS24950 (58020) | 58020..58583 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| QC806_RS24955 (58669) | 58669..59134 | - | 466 | Protein_71 | hypothetical protein | - |
| QC806_RS24960 (59431) | 59431..59958 | + | 528 | WP_284632206.1 | single-stranded DNA-binding protein | - |
| QC806_RS24965 (60016) | 60016..60249 | + | 234 | WP_284632207.1 | DUF905 family protein | - |
| QC806_RS24970 (60310) | 60310..62333 | + | 2024 | Protein_74 | ParB/RepB/Spo0J family partition protein | - |
| QC806_RS24975 (62402) | 62402..62836 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| QC806_RS24980 (62833) | 62833..63595 | + | 763 | Protein_76 | plasmid SOS inhibition protein A | - |
| QC806_RS24985 (63573) | 63573..63752 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - (63564) | 63564..63788 | + | 225 | NuclAT_0 | - | - |
| - (63564) | 63564..63788 | + | 225 | NuclAT_0 | - | - |
| - (63564) | 63564..63788 | + | 225 | NuclAT_0 | - | - |
| - (63564) | 63564..63788 | + | 225 | NuclAT_0 | - | - |
| QC806_RS24990 (63774) | 63774..63923 | + | 150 | Protein_78 | plasmid maintenance protein Mok | - |
| QC806_RS24995 (63865) | 63865..63990 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QC806_RS25000 (64309) | 64309..64605 | - | 297 | Protein_80 | hypothetical protein | - |
| QC806_RS25005 (64905) | 64905..65201 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| QC806_RS25010 (65312) | 65312..66133 | + | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| QC806_RS25015 (66430) | 66430..67032 | - | 603 | WP_000243713.1 | hypothetical protein | VF |
| QC806_RS25020 (67355) | 67355..67738 | + | 384 | WP_001354030.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QC806_RS25025 (67932) | 67932..68603 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| QC806_RS25030 (68740) | 68740..68967 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| QC806_RS25035 (69000) | 69000..69359 | + | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| QC806_RS25040 (69374) | 69374..69685 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| QC806_RS25045 (69707) | 69707..70273 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| QC806_RS25050 (70260) | 70260..70988 | + | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| QC806_RS25055 (70988) | 70988..72439 | + | 1452 | WP_000146675.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QC806_RS25060 (72429) | 72429..72995 | + | 567 | WP_000896599.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QC806_RS25065 (72982) | 72982..73302 | + | 321 | WP_001057307.1 | conjugal transfer protein TrbD | - |
| QC806_RS25070 (73299) | 73299..73814 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QC806_RS25075 (73949) | 73949..74170 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| QC806_RS25080 (74163) | 74163..74639 | + | 477 | WP_000549587.1 | hypothetical protein | - |
| QC806_RS25085 (74719) | 74719..74937 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| QC806_RS25090 (74965) | 74965..75312 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| QC806_RS25095 (75438) | 75438..78068 | + | 2631 | WP_000069777.1 | type IV secretion system protein TraC | - |
| QC806_RS25100 (78065) | 78065..78451 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| QC806_RS25105 (78448) | 78448..79080 | + | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| QC806_RS25110 (79077) | 79077..80069 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| QC806_RS25115 (80099) | 80099..80404 | + | 306 | WP_000224416.1 | hypothetical protein | - |
| QC806_RS25120 (80413) | 80413..81051 | + | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QC806_RS25125 (81048) | 81048..82898 | + | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QC806_RS25130 (82925) | 82925..83182 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| QC806_RS25135 (83175) | 83175..83918 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QC806_RS25140 (83932) | 83932..84276 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| QC806_RS25145 (84395) | 84395..84679 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QC806_RS25150 (84666) | 84666..85211 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QC806_RS25155 (85141) | 85141..85488 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| QC806_RS25160 (85469) | 85469..85861 | + | 393 | WP_000660699.1 | F-type conjugal transfer protein TrbF | - |
| QC806_RS25165 (85848) | 85848..87221 | + | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| QC806_RS25170 (87218) | 87218..90040 | + | 2823 | WP_001007039.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QC806_RS25175 (90056) | 90056..90541 | + | 486 | WP_000605870.1 | hypothetical protein | - |
| QC806_RS25180 (90590) | 90590..90733 | + | 144 | Protein_116 | complement resistance protein TraT | - |
| QC806_RS25185 (90792) | 90792..91760 | - | 969 | WP_031942297.1 | IS5 family transposase IS903B | Transposase |
| QC806_RS25190 (91794) | 91794..92387 | + | 594 | Protein_118 | complement resistance protein TraT | - |
| QC806_RS25195 (92590) | 92590..93327 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| QC806_RS25200 (93378) | 93378..95594 | + | 2217 | WP_000009331.1 | type IV conjugative transfer system coupling protein TraD | - |
| QC806_RS25205 (95594) | 95594..100864 | + | 5271 | WP_284632201.1 | Multifunctional conjugation protein TraI | Relaxase |
| QC806_RS25210 (100884) | 100884..101630 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| QC806_RS25215 (101689) | 101689..102549 | + | 861 | WP_000704523.1 | Quorum-quenching protein AidA | VF |
| QC806_RS25220 (102652) | 102652..103212 | + | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| QC806_RS25225 (103341) | 103341..103553 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| QC806_RS25230 (103798) | 103798..104259 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| QC806_RS25235 (104305) | 104305..104514 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| QC806_RS25240 (104552) | 104552..105142 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| QC806_RS25245 (105382) | 105382..105636 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| QC806_RS25250 (105874) | 105874..105948 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| QC806_RS25255 (105941) | 105941..106798 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| QC806_RS25260 (106946) | 106946..107650 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QC806_RS25265 (107797) | 107797..108926 | + | 1130 | WP_085959879.1 | IS3 family transposase IS1133 | Transposase |
| QC806_RS25270 (109033) | 109033..109836 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| QC806_RS25275 (109836) | 109836..110672 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| QC806_RS25280 (110978) | 110978..111220 | + | 243 | WP_000844627.1 | transposase | - |
| QC806_RS25285 (111252) | 111252..111902 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| QC806_RS25290 (112008) | 112008..113207 | + | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| QC806_RS25295 (113174) | 113174..113362 | - | 189 | Protein_139 | IS91 family transposase | - |
| QC806_RS25300 (113474) | 113474..113779 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| QC806_RS25305 (113807) | 113807..115021 | - | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| QC806_RS25310 (115238) | 115238..116122 | - | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| QC806_RS25315 (116153) | 116153..117646 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| QC806_RS25320 (117857) | 117857..118081 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| QC806_RS25325 (118078) | 118078..118815 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QC806_RS25330 (119301) | 119301..119441 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| QC806_RS25335 (119447) | 119447..120151 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QC806_RS25340 (120216) | 120216..120509 | + | 294 | Protein_148 | IS6 family transposase IS15DI | Transposase |
| QC806_RS25345 (120814) | 120814..121371 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|