NZ_CP1210881..167740

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 167740 bp
Accession: NZ_CP121088        Location: 1..167740         Organism: Escherichia coli strain ST3       Replicon: plasmid p167kb


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
P5670_RS23990 (1) 1..978 + 978 WP_063815211.1 RepB family plasmid replication initiator protein -
P5670_RS23995 (1263) 1263..2003 - 741 WP_001066954.1 tyrosine-type recombinase/integrase -
P5670_RS24000 (2124) 2124..2312 - 189 WP_001324033.1 hypothetical protein -
P5670_RS24005 (2686) 2686..3588 - 903 WP_001312822.1 hypothetical protein VF
P5670_RS24010 (3657) 3657..4766 - 1110 WP_000771475.1 SDR family oxidoreductase -
P5670_RS24015 (5199) 5199..6152 - 954 WP_000280980.1 Protease 7 VF
P5670_RS24020 (7449) 7449..7628 - 180 Protein_6 integrase core domain-containing protein -
P5670_RS24025 (7767) 7767..8966 + 1200 Protein_7 IS3 family transposase IS629 Transposase
P5670_RS24030 (9114) 9114..9439 - 326 Protein_8 IS3 family transposase ISLad1 Transposase
P5670_RS24035 (9485) 9485..9825 + 341 Protein_9 IS3 family transposase -
P5670_RS24040 (10420) 10420..11607 + 1188 WP_000928804.1 efflux RND transporter periplasmic adaptor subunit -
P5670_RS24045 (11604) 11604..13544 + 1941 WP_000733250.1 Macrolide export ATP-binding/permease protein MacB VF
P5670_RS24050 (13548) 13548..14918 + 1371 WP_001312828.1 efflux transporter outer membrane subunit -
P5670_RS24055 (15392) 15392..15586 + 195 Protein_13 IS200/IS605-like element IS200C family transposase -
P5670_RS24060 (15715) 15715..16656 - 942 WP_000974762.1 hypothetical protein -
P5670_RS24065 (16891) 16891..18280 - 1390 Protein_15 ISNCY family transposase ISKpn21 Transposase
P5670_RS24070 (18590) 18590..18739 - 150 Protein_16 IS3 family transposase IS2 Transposase
P5670_RS24075 (18917) 18917..20110 - 1194 WP_000450494.1 GTP-binding protein -
P5670_RS24080 (21352) 21352..22089 - 738 Protein_18 IS3 family transposase IS2 Transposase
P5670_RS24085 (22142) 22142..23304 + 1163 WP_085947598.1 IS3 family transposase ISEc17 Transposase
P5670_RS24090 (23321) 23321..23841 - 521 Protein_20 IS3 family transposase IS2 Transposase
P5670_RS24095 (24466) 24466..24759 + 294 WP_000738422.1 increased serum survival lipoprotein Iss -
P5670_RS24100 (24817) 24817..25016 - 200 Protein_22 lysis protein -
P5670_RS24105 (25570) 25570..26594 + 1025 Protein_23 integrase core domain-containing protein -
P5670_RS24110 (27905) 27905..29020 + 1116 WP_001318220.1 Elloramycin glycosyltransferase ElmGT VF
P5670_RS24115 (29160) 29160..32819 + 3660 WP_001389363.1 Multidrug efflux ATP-binding/permease protein VF
P5670_RS24120 (32923) 32923..34152 + 1230 WP_000933678.1 Enterochelin esterase VF
P5670_RS24125 (34237) 34237..35193 + 957 WP_000271274.1 hypothetical protein VF
P5670_RS24130 (35238) 35238..37415 - 2178 WP_001222185.1 Ferric enterobactin receptor VF
P5670_RS24135 (38281) 38281..39315 - 1035 WP_001190234.1 3-deoxy-7-phosphoheptulonate synthase -
P5670_RS24140 (39496) 39496..39797 + 302 Protein_30 hypothetical protein -
P5670_RS24145 (39875) 39875..40183 - 309 WP_000377483.1 DUF6404 family protein -
P5670_RS24150 (40336) 40336..40461 - 126 Protein_32 type II toxin-antitoxin system toxin YacB -
P5670_RS24155 (40461) 40461..40729 - 269 Protein_33 type II toxin-antitoxin system antitoxin YacA -
P5670_RS24160 (41340) 41340..42614 + 1275 WP_000489609.1 HlyD family secretion protein -
P5670_RS24165 (42607) 42607..44703 + 2097 WP_000184924.1 microcin H47 export transporter peptidase/ATP-binding subunit MchF -
P5670_RS24170 (44873) 44873..45184 - 312 WP_001259758.1 colicin V -
P5670_RS24175 (45162) 45162..45398 - 237 WP_001323890.1 colicin V immunity protein -
P5670_RS24180 (45517) 45517..45960 + 444 WP_001323891.1 dehydrogenase -
P5670_RS24185 (45932) 45932..46336 + 405 WP_001389361.1 hypothetical protein -
P5670_RS24190 (46338) 46338..46607 + 270 WP_000379710.1 SemiSWEET transporter -
P5670_RS24195 (46604) 46604..47584 + 981 WP_001017346.1 NAD(P)-binding domain-containing protein -
P5670_RS24200 (47660) 47660..48040 + 381 WP_001171523.1 IS66 family transposase ISEc8 Transposase
P5670_RS24205 (48037) 48037..48384 + 348 WP_000612591.1 IS66 family transposase ISEc8 Transposase
P5670_RS24210 (48434) 48434..49971 + 1538 Protein_44 IS66 family transposase ISEc8 Transposase
P5670_RS24215 (50011) 50011..50277 + 267 Protein_45 Tn3 family transposase TnpR_TnEc1 Transposase
P5670_RS24220 (50324) 50324..50716 - 393 Protein_46 peptide deformylase -
P5670_RS24225 (50825) 50825..54958 - 4134 WP_001080137.1 Temperature-sensitive hemagglutinin tsh autotransporter VF
P5670_RS24230 (55129) 55129..55320 + 192 Protein_48 IS91 family transposase -
P5670_RS24235 (55599) 55599..55856 + 258 Protein_49 IS3 family transposase IS911 Transposase
P5670_RS24240 (55924) 55924..57075 + 1152 WP_001442799.1 IS30 family transposase IS30D Transposase
P5670_RS24245 (57197) 57197..57562 + 366 WP_000124098.1 hypothetical protein -
P5670_RS24250 (57562) 57562..58677 + 1116 Protein_52 IS91 family transposase IS91 Transposase
P5670_RS24255 (58858) 58858..59202 - 345 WP_001553768.1 hypothetical protein -
P5670_RS24260 (60060) 60060..61811 - 1752 Protein_54 Tn3 family transposase TnpA_TnAs1 Transposase
P5670_RS24265 (61815) 61815..62207 + 393 WP_001351729.1 isochorismatase family cysteine hydrolase -
P5670_RS24270 (62345) 62345..63229 + 885 WP_000058717.1 EamA family transporter -
P5670_RS24275 (63261) 63261..64460 - 1200 WP_001493765.1 Tetracycline resistance protein, class C ARG
P5670_RS24280 (64566) 64566..65216 + 651 WP_001493764.1 tetracycline resistance transcriptional repressor TetR(A) -
P5670_RS24285 (65248) 65248..65490 - 243 WP_000844627.1 transposase -
P5670_RS24290 (65653) 65653..66198 + 546 WP_001493763.1 plasmid pRiA4b ORF-3 family protein -
P5670_RS24295 (66335) 66335..66907 + 573 WP_001493762.1 Tn3 family transposase TnpR_ISPa40 Transposase
P5670_RS24300 (66944) 66944..68335 + 1392 WP_001493761.1 ISKra4 family transposase ISKpn19 Transposase
P5670_RS24305 (68368) 68368..68796 + 429 Protein_63 Tn3 family transposase TnpR_ISMex22 Transposase
P5670_RS24310 (69115) 69115..69771 - 657 WP_001516695.1 Pentapeptide repeat protein ARG
P5670_RS24315 (70166) 70166..71181 + 1016 Protein_65 IS3 family transposase ISEc36 Transposase
P5670_RS24320 (71224) 71224..71814 - 591 Protein_66 Tn3 family transposase TnpA_Tn3 Transposase
P5670_RS24325 (71878) 71878..72582 + 705 WP_001067855.1 Tn3 family transposase TnpA_Tn3 Transposase
P5670_RS24330 (72788) 72788..73648 - 861 WP_000027057.1 Beta-lactamase TEM ARG
P5670_RS24335 (73831) 73831..74388 - 558 WP_001235713.1 Tn3 family transposase TnpR_Tn3 Transposase
P5670_RS24340 (74552) 74552..77557 + 3006 WP_001143760.1 Tn3 family transposase TnpA_Tn3 Transposase
P5670_RS24345 (77490) 77490..77955 - 466 Protein_71 plasmid replication initiator RepA -
P5670_RS24350 (77948) 77948..78430 - 483 WP_001273588.1 hypothetical protein -
P5670_RS24355 (78423) 78423..78470 - 48 WP_229471593.1 hypothetical protein -
P5670_RS24360 (78461) 78461..78712 + 252 WP_223195197.1 replication protein RepA -
P5670_RS24365 (78729) 78729..78986 - 258 WP_000083845.1 replication regulatory protein RepA -
P5670_RS24370 (79270) 79270..79419 - 150 WP_001312851.1 Hok/Gef family protein Toxin Detail
- (79463) 79463..79524 + 62 NuclAT_1 - Antitoxin Detail
- (79463) 79463..79524 + 62 NuclAT_1 - Antitoxin Detail
- (79463) 79463..79524 + 62 NuclAT_1 - Antitoxin Detail
- (79463) 79463..79524 + 62 NuclAT_1 - Antitoxin Detail
P5670_RS24375 (79780) 79780..79854 - 75 Protein_77 endonuclease -
P5670_RS24380 (80100) 80100..80312 - 213 WP_001299730.1 ANR family transcriptional regulator -
P5670_RS24385 (80448) 80448..81008 - 561 WP_000139315.1 fertility inhibition protein FinO -
P5670_RS24390 (81111) 81111..81971 - 861 WP_000704513.1 Quorum-quenching protein AidA VF
P5670_RS24395 (82030) 82030..82776 - 747 WP_000205749.1 conjugal transfer pilus acetylase TraX -
P5670_RS24400 (82796) 82796..88066 - 5271 WP_000986963.1 Multifunctional conjugation protein TraI Relaxase
P5670_RS24405 (88148) 88148..88375 + 228 WP_000450520.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
P5670_RS24410 (88375) 88375..88773 + 399 WP_000911313.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
P5670_RS24415 (88782) 88782..90935 - 2154 WP_000009324.1 type IV conjugative transfer system coupling protein TraD -
P5670_RS24420 (91188) 91188..91919 - 732 WP_023565183.1 conjugal transfer complement resistance protein TraT -
P5670_RS24425 (91951) 91951..92448 - 498 WP_000605857.1 entry exclusion protein -
P5670_RS24430 (92464) 92464..95286 - 2823 WP_001007018.1 conjugal transfer mating-pair stabilization protein TraG -
P5670_RS24435 (95283) 95283..96656 - 1374 WP_001517790.1 conjugal transfer pilus assembly protein TraH -
P5670_RS24440 (96656) 96656..97036 - 381 WP_001389370.1 F-type conjugal transfer protein TrbF -
P5670_RS24445 (97023) 97023..97364 - 342 WP_001443031.1 P-type conjugative transfer protein TrbJ -
P5670_RS24450 (97294) 97294..97839 - 546 WP_000059851.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
P5670_RS24455 (97826) 97826..98110 - 285 WP_000624109.1 type-F conjugative transfer system pilin chaperone TraQ -
P5670_RS24460 (98191) 98191..98505 + 315 WP_001324103.1 hypothetical protein -
P5670_RS24465 (98507) 98507..98854 - 348 WP_001287910.1 conjugal transfer protein TrbA -
P5670_RS24470 (98870) 98870..99613 - 744 WP_001030377.1 type-F conjugative transfer system pilin assembly protein TraF -
P5670_RS24475 (99606) 99606..99863 - 258 WP_000864318.1 conjugal transfer protein TrbE -
P5670_RS24480 (99890) 99890..101698 - 1809 WP_000821838.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
P5670_RS24485 (101695) 101695..102333 - 639 WP_000777695.1 type-F conjugative transfer system pilin assembly protein TrbC -
P5670_RS24490 (102342) 102342..103334 - 993 WP_000830183.1 conjugal transfer pilus assembly protein TraU -
P5670_RS24495 (103331) 103331..103963 - 633 WP_001203717.1 type-F conjugative transfer system protein TraW -
P5670_RS24500 (103960) 103960..104346 - 387 WP_000099691.1 type-F conjugative transfer system protein TrbI -
P5670_RS24505 (104343) 104343..106970 - 2628 WP_001064245.1 type IV secretion system protein TraC -
P5670_RS24510 (107130) 107130..107351 - 222 WP_001278689.1 conjugal transfer protein TraR -
P5670_RS24515 (107486) 107486..108001 - 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
P5670_RS24520 (107998) 107998..108249 - 252 WP_001038342.1 conjugal transfer protein TrbG -
P5670_RS24525 (108261) 108261..108458 - 198 WP_024179215.1 conjugal transfer protein TrbD -
P5670_RS24530 (108445) 108445..109035 - 591 WP_000002787.1 conjugal transfer pilus-stabilizing protein TraP -
P5670_RS24535 (109025) 109025..110452 - 1428 WP_000146684.1 F-type conjugal transfer pilus assembly protein TraB -
P5670_RS24540 (110452) 110452..111180 - 729 WP_001230813.1 type-F conjugative transfer system secretin TraK -
P5670_RS24545 (111167) 111167..111733 - 567 WP_000399790.1 type IV conjugative transfer system protein TraE -
P5670_RS24550 (111755) 111755..112066 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
P5670_RS24555 (112081) 112081..112446 - 366 WP_000340282.1 type IV conjugative transfer system pilin TraA -
P5670_RS24560 (112489) 112489..112704 - 216 WP_001352842.1 conjugal transfer relaxosome protein TraY -
P5670_RS24565 (112840) 112840..113487 - 648 WP_000332520.1 conjugal transfer transcriptional regulator TraJ -
P5670_RS24570 (113679) 113679..114062 - 384 WP_001063020.1 conjugal transfer relaxosome DNA-binding protein TraM -
P5670_RS24575 (114402) 114402..115004 + 603 WP_077248356.1 hypothetical protein VF
P5670_RS24580 (115299) 115299..116120 - 822 WP_001234475.1 DUF932 domain-containing protein -
P5670_RS24585 (116239) 116239..116526 - 288 WP_000107546.1 hypothetical protein -
P5670_RS24590 (116551) 116551..116757 - 207 WP_000547965.1 hypothetical protein -
P5670_RS24595 (116827) 116827..117123 + 297 Protein_121 hypothetical protein -
P5670_RS24600 (117424) 117424..117549 - 126 WP_096937776.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
P5670_RS24605 (117491) 117491..117640 - 150 Protein_123 DUF5431 family protein -
- (117647) 117647..117845 - 199 NuclAT_0 - Antitoxin Detail
- (117647) 117647..117845 - 199 NuclAT_0 - Antitoxin Detail
- (117647) 117647..117845 - 199 NuclAT_0 - Antitoxin Detail
- (117647) 117647..117845 - 199 NuclAT_0 - Antitoxin Detail
P5670_RS24610 (117814) 117814..118576 - 763 Protein_124 plasmid SOS inhibition protein A -
P5670_RS24615 (118573) 118573..119007 - 435 WP_000845928.1 conjugation system SOS inhibitor PsiB -
P5670_RS24620 (119062) 119062..121020 - 1959 WP_029487628.1 ParB/RepB/Spo0J family partition protein -
P5670_RS24625 (121086) 121086..121319 - 234 WP_000005990.1 DUF905 family protein -
P5670_RS24630 (121376) 121376..121915 - 540 WP_000290801.1 single-stranded DNA-binding protein -
P5670_RS24635 (122233) 122233..122742 + 510 WP_071600123.1 hypothetical protein -
P5670_RS24640 (122712) 122712..122903 - 192 WP_001027495.1 hypothetical protein -
P5670_RS24645 (122900) 122900..123133 - 234 Protein_131 hypothetical protein -
P5670_RS24650 (123328) 123328..124869 + 1542 WP_175118676.1 IS21 family transposase ISEc12 Transposase
P5670_RS24655 (124884) 124884..125630 + 747 WP_001016257.1 IS21 family transposase ISEc12 Transposase
P5670_RS24660 (125715) 125715..125909 - 195 Protein_134 hypothetical protein -
P5670_RS24665 (125956) 125956..126381 - 426 WP_001198918.1 antirestriction protein -
P5670_RS24670 (126794) 126794..127570 - 777 WP_001005035.1 hypothetical protein -
P5670_RS24675 (127616) 127616..128170 - 555 WP_077248347.1 DUF1380 family protein -
P5670_RS24680 (128064) 128064..128285 - 222 WP_001104870.1 hypothetical protein -
P5670_RS24685 (128286) 128286..128969 - 684 WP_000085939.1 DNA methylase -
P5670_RS24690 (129046) 129046..129351 - 306 WP_010891292.1 hypothetical protein -
P5670_RS24695 (129355) 129355..130256 - 902 Protein_141 DUF1281 domain-containing protein -
P5670_RS24700 (130994) 130994..131965 - 972 WP_000817035.1 ParB/RepB/Spo0J family plasmid partition protein -
P5670_RS24705 (131965) 131965..133131 - 1167 WP_000772446.1 hypothetical protein VF
P5670_RS24710 (133719) 133719..134474 - 756 WP_000852146.1 replication initiation protein RepE -
P5670_RS24715 (135226) 135226..136032 - 807 WP_000016982.1 site-specific integrase -
P5670_RS24720 (136033) 136033..136338 - 306 WP_001159868.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
P5670_RS24725 (136340) 136340..136558 - 219 WP_000813634.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
P5670_RS24730 (137126) 137126..137638 + 513 WP_000151784.1 hypothetical protein -
P5670_RS24735 (137672) 137672..138805 - 1134 WP_000545984.1 DUF3800 domain-containing protein -
P5670_RS24740 (138972) 138972..139745 - 774 WP_000905949.1 hypothetical protein -
P5670_RS24745 (139758) 139758..140258 - 501 WP_000528932.1 HEPN family nuclease -
P5670_RS24750 (140523) 140523..140753 + 231 WP_001261278.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
P5670_RS24755 (140750) 140750..141166 + 417 WP_001034046.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
P5670_RS24760 (141211) 141211..145005 - 3795 WP_001144731.1 hypothetical protein -
P5670_RS24765 (145386) 145386..145616 + 231 WP_001261286.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
P5670_RS24770 (145613) 145613..146029 + 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
P5670_RS24775 (146104) 146104..147669 + 1566 WP_001128474.1 AAA family ATPase -
P5670_RS24780 (147654) 147654..148676 + 1023 WP_000361402.1 helicase UvrD -
P5670_RS24790 (149983) 149983..150897 + 915 WP_000949004.1 putative periplasmic iron-binding protein VF
P5670_RS24795 (150897) 150897..151724 + 828 WP_000983710.1 Manganese transport system ATP-binding protein MntB VF
P5670_RS24800 (151721) 151721..152578 + 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
P5670_RS24805 (152575) 152575..153432 + 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
P5670_RS24810 (153921) 153921..154334 + 414 Protein_164 phosphopyruvate hydratase -
P5670_RS24815 (154675) 154675..155055 + 381 WP_001318207.1 fluoride efflux transporter CrcB -
P5670_RS24820 (155435) 155435..156628 - 1194 WP_000095526.1 MFS transporter -
P5670_RS24825 (156764) 156764..158488 + 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
P5670_RS24830 (158489) 158489..159436 + 948 WP_000011908.1 N(6)-hydroxylysine O-acetyltransferase VF
P5670_RS24835 (159436) 159436..161178 + 1743 WP_001015721.1 Aerobactin synthase VF
P5670_RS24840 (161175) 161175..162508 + 1334 Protein_170 L-lysine N6-monooxygenase VF
P5670_RS24845 (162534) 162534..164735 + 2202 WP_000973519.1 Ferric aerobactin receptor VF
P5670_RS24850 (165115) 165115..165812 + 698 WP_223155668.1 IS1 family transposase IS1S Transposase
P5670_RS24855 (165992) 165992..166505 - 514 Protein_173 DUF4113 domain-containing protein -
P5670_RS24860 (166566) 166566..166670 - 105 Protein_174 AAA family ATPase -
P5670_RS24865 (166672) 166672..166995 - 324 Protein_175 IS21 family transposase IS21 Transposase

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance