MGE detailed information
MGE type: Conjugative plasmid MGE length: 122286 bp
Accession: NZ_CP120564 Location: 1..122286 Organism: Escherichia coli strain H22 Replicon: plasmid pH22_122286
Accession: NZ_CP120564 Location: 1..122286 Organism: Escherichia coli strain H22 Replicon: plasmid pH22_122286
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P5708_RS24555 (1) | 1..978 | + | 978 | WP_021574288.1 | RepB family plasmid replication initiator protein | - |
| P5708_RS24560 (1263) | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| P5708_RS24565 (2124) | 2124..2312 | - | 189 | WP_097434186.1 | serine/threonine protein kinase | - |
| P5708_RS24570 (2673) | 2673..3842 | + | 1170 | WP_019842698.1 | hypothetical protein | - |
| P5708_RS24575 (4461) | 4461..4904 | + | 444 | WP_185731777.1 | reverse transcriptase domain-containing protein | - |
| P5708_RS24580 (4927) | 4927..5727 | + | 801 | WP_019842700.1 | reverse transcriptase domain-containing protein | - |
| P5708_RS24585 (5827) | 5827..6117 | - | 291 | Protein_6 | IS110 family transposase | - |
| P5708_RS24590 (8161) | 8161..10131 | + | 1971 | WP_024186502.1 | Hemin receptor | VF |
| P5708_RS24595 (10150) | 10150..10947 | + | 798 | WP_019842764.1 | DUF4198 domain-containing protein | - |
| P5708_RS24600 (11188) | 11188..12391 | + | 1204 | Protein_9 | IS3 family transposase | - |
| P5708_RS24605 (12559) | 12559..13730 | + | 1172 | Protein_10 | ISL3 family transposase | - |
| P5708_RS24610 (14031) | 14031..14432 | + | 402 | WP_019842760.1 | g-type lysoyme inhibitor PliG | - |
| P5708_RS24615 (15382) | 15382..15630 | - | 249 | WP_019842759.1 | DUF883 family protein | - |
| P5708_RS24620 (15664) | 15664..15962 | + | 299 | Protein_13 | XRE family transcriptional regulator | - |
| P5708_RS24625 (16264) | 16264..16473 | + | 210 | WP_125094061.1 | hypothetical protein | - |
| P5708_RS24630 (16641) | 16641..17177 | + | 537 | WP_077826583.1 | Autotransporter adhesin BpaC | VF |
| P5708_RS24635 (17230) | 17230..17534 | - | 305 | Protein_16 | IS3 family transposase IS1203 | Transposase |
| P5708_RS24640 (17520) | 17520..17782 | - | 263 | Protein_17 | IS21 family transposase IS100 | Transposase |
| P5708_RS24645 (17739) | 17739..17870 | - | 132 | Protein_18 | IS21 family transposase IS100 | Transposase |
| P5708_RS24650 (17827) | 17827..18848 | - | 1022 | Protein_19 | IS21 family transposase IS100kyp | Transposase |
| P5708_RS24655 (19110) | 19110..20342 | - | 1233 | WP_019842670.1 | MFS transporter | - |
| P5708_RS24660 (20358) | 20358..20735 | - | 378 | WP_019842669.1 | RidA family protein | - |
| P5708_RS24665 (20757) | 20757..21716 | - | 960 | WP_019842668.1 | sugar phosphate isomerase/epimerase family protein | - |
| P5708_RS24670 (21902) | 21902..22564 | + | 663 | WP_277708318.1 | PAS domain-containing protein | - |
| P5708_RS24675 (22705) | 22705..23022 | - | 318 | Protein_24 | conjugal transfer protein TrbC | - |
| P5708_RS24680 (23022) | 23022..23231 | - | 210 | Protein_25 | ISNCY family transposase | - |
| P5708_RS24685 (23598) | 23598..23747 | - | 150 | Protein_26 | IS3 family transposase IS2 | Transposase |
| P5708_RS24690 (23925) | 23925..25118 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| P5708_RS24695 (25441) | 25441..25677 | + | 237 | Protein_28 | increased serum survival lipoprotein Iss | - |
| P5708_RS24700 (25761) | 25761..25909 | - | 149 | Protein_29 | Rz1 family lipoprotein | - |
| P5708_RS24705 (25866) | 25866..25973 | - | 108 | Protein_30 | lysis system i-spanin subunit Rz | - |
| P5708_RS24710 (26537) | 26537..26839 | + | 303 | Protein_31 | IS481 family transposase ISKpn28 | Transposase |
| P5708_RS24715 (27801) | 27801..28916 | + | 1116 | WP_001520072.1 | Elloramycin glycosyltransferase ElmGT | VF |
| P5708_RS24720 (29056) | 29056..32715 | + | 3660 | WP_019842663.1 | Multidrug efflux ATP-binding/permease protein | VF |
| P5708_RS24725 (32819) | 32819..34048 | + | 1230 | WP_019842662.1 | Enterochelin esterase | VF |
| P5708_RS24730 (34133) | 34133..35089 | + | 957 | WP_000271274.1 | hypothetical protein | VF |
| P5708_RS24735 (35134) | 35134..37311 | - | 2178 | WP_019842661.1 | Ferric enterobactin receptor | VF |
| P5708_RS24740 (37615) | 37615..37875 | - | 261 | WP_019842660.1 | hypothetical protein | - |
| P5708_RS24745 (38298) | 38298..38515 | + | 218 | Protein_38 | ESPR domain-containing protein | - |
| P5708_RS24755 (40035) | 40035..41519 | - | 1485 | WP_097419528.1 | alpha/beta hydrolase | - |
| P5708_RS24760 (41704) | 41704..42654 | - | 951 | WP_107131109.1 | Protease 7 | VF |
| P5708_RS24765 (42979) | 42979..43104 | + | 126 | Protein_42 | efflux transporter periplasmic adaptor subunit | - |
| P5708_RS24770 (43108) | 43108..43344 | - | 237 | WP_137498364.1 | colicin V immunity protein | - |
| P5708_RS24775 (43860) | 43860..44063 | - | 204 | Protein_44 | hypothetical protein | - |
| P5708_RS24780 (44169) | 44169..44444 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| P5708_RS24785 (44444) | 44444..44722 | - | 279 | WP_019842653.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| P5708_RS24790 (44809) | 44809..45595 | - | 787 | Protein_47 | IS21 family transposase IS21 | Transposase |
| P5708_RS24795 (45717) | 45717..46064 | - | 348 | WP_019842650.1 | DUF6404 family protein | - |
| P5708_RS24800 (46183) | 46183..46530 | + | 348 | WP_001595228.1 | colicin E1 family microcin immunity protein | - |
| P5708_RS24805 (46548) | 46548..48428 | - | 1881 | WP_277708340.1 | colicin Ia central receptor-binding domain-containing protein | - |
| P5708_RS24810 (48669) | 48669..48872 | + | 204 | Protein_51 | hypothetical protein | - |
| P5708_RS24815 (48960) | 48960..50159 | - | 1200 | WP_019842812.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| P5708_RS24820 (50287) | 50287..51183 | - | 897 | WP_024186508.1 | HTH-type transcriptional regulator PgrR | VF |
| P5708_RS24825 (51313) | 51313..52068 | + | 756 | WP_019842810.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| P5708_RS24830 (52106) | 52106..53044 | + | 939 | WP_019842809.1 | alpha/beta hydrolase | - |
| P5708_RS24835 (53267) | 53267..53419 | - | 153 | Protein_56 | hypothetical protein | - |
| P5708_RS24840 (53501) | 53501..54283 | - | 783 | WP_277705727.1 | IS21 family transposase IS100kyp | Transposase |
| P5708_RS24845 (54280) | 54280..55302 | - | 1023 | WP_277705726.1 | IS21 family transposase IS100kyp | Transposase |
| P5708_RS24850 (55535) | 55535..55810 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| P5708_RS24855 (55810) | 55810..56094 | - | 285 | WP_024186511.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| P5708_RS24860 (57007) | 57007..57864 | - | 858 | WP_019842754.1 | incFII family plasmid replication initiator RepA | - |
| P5708_RS24865 (57857) | 57857..58339 | - | 483 | WP_019842753.1 | hypothetical protein | - |
| P5708_RS24870 (58332) | 58332..58379 | - | 48 | WP_229471593.1 | hypothetical protein | - |
| P5708_RS24875 (58370) | 58370..58621 | + | 252 | WP_223195197.1 | replication protein RepA | - |
| P5708_RS24880 (58638) | 58638..58895 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| P5708_RS24885 (59179) | 59179..59328 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (59372) | 59372..59433 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (59372) | 59372..59433 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (59372) | 59372..59433 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (59372) | 59372..59433 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| P5708_RS24890 (59690) | 59690..59764 | - | 75 | Protein_67 | endonuclease | - |
| P5708_RS24895 (60010) | 60010..60222 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| P5708_RS24900 (60358) | 60358..60918 | - | 561 | WP_019842752.1 | fertility inhibition protein FinO | - |
| P5708_RS24905 (60973) | 60973..61719 | - | 747 | WP_019842751.1 | conjugal transfer pilus acetylase TraX | - |
| P5708_RS24910 (61739) | 61739..67009 | - | 5271 | WP_097748103.1 | Multifunctional conjugation protein TraI | Relaxase |
| P5708_RS24915 (67091) | 67091..67318 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| P5708_RS24920 (67318) | 67318..67716 | + | 399 | WP_000911317.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| P5708_RS24925 (67725) | 67725..69878 | - | 2154 | WP_024186499.1 | type IV conjugative transfer system coupling protein TraD | - |
| P5708_RS24930 (70104) | 70104..70892 | - | 789 | WP_019842748.1 | hypothetical protein | - |
| P5708_RS24935 (71102) | 71102..71413 | + | 312 | WP_019842747.1 | heavy metal-binding domain-containing protein | - |
| P5708_RS24940 (71416) | 71416..74235 | - | 2820 | WP_033556120.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| P5708_RS24945 (74232) | 74232..75539 | - | 1308 | Protein_78 | conjugal transfer pilus assembly protein TraH | - |
| P5708_RS24950 (76039) | 76039..76569 | - | 531 | WP_019842711.1 | hypothetical protein | - |
| P5708_RS24955 (76584) | 76584..77126 | - | 543 | WP_019842710.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| P5708_RS24960 (77113) | 77113..77397 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| P5708_RS24965 (77515) | 77515..77862 | - | 348 | WP_019842709.1 | conjugal transfer protein TrbA | - |
| P5708_RS24970 (77878) | 77878..78621 | - | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| P5708_RS24975 (78614) | 78614..78871 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| P5708_RS24980 (78898) | 78898..80706 | - | 1809 | WP_019842708.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| P5708_RS24985 (80703) | 80703..81341 | - | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| P5708_RS24990 (81350) | 81350..82342 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| P5708_RS24995 (82339) | 82339..82971 | - | 633 | WP_001203730.1 | type-F conjugative transfer system protein TraW | - |
| P5708_RS25000 (82968) | 82968..83354 | - | 387 | WP_000214094.1 | type-F conjugative transfer system protein TrbI | - |
| P5708_RS25005 (83351) | 83351..85978 | - | 2628 | WP_019842707.1 | type IV secretion system protein TraC | - |
| P5708_RS25010 (86138) | 86138..86359 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| P5708_RS25015 (86494) | 86494..87009 | - | 516 | WP_019842705.1 | type IV conjugative transfer system lipoprotein TraV | - |
| P5708_RS25020 (87006) | 87006..87257 | - | 252 | WP_277708163.1 | conjugal transfer protein TrbG | - |
| P5708_RS25025 (87269) | 87269..87466 | - | 198 | WP_019842703.1 | conjugal transfer protein TrbD | - |
| P5708_RS25030 (87453) | 87453..88043 | - | 591 | Protein_95 | conjugal transfer pilus-stabilizing protein TraP | - |
| P5708_RS25035 (88033) | 88033..89460 | - | 1428 | WP_019842728.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| P5708_RS25040 (89460) | 89460..90188 | - | 729 | WP_019842729.1 | type-F conjugative transfer system secretin TraK | - |
| P5708_RS25045 (90175) | 90175..90741 | - | 567 | WP_277708167.1 | type IV conjugative transfer system protein TraE | - |
| P5708_RS25050 (90763) | 90763..91074 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| P5708_RS25055 (91089) | 91089..91448 | - | 360 | WP_019842731.1 | type IV conjugative transfer system pilin TraA | - |
| P5708_RS25060 (91482) | 91482..91709 | - | 228 | WP_019842732.1 | conjugal transfer relaxosome protein TraY | - |
| P5708_RS25065 (91828) | 91828..92475 | - | 648 | WP_019842733.1 | transcriptional regulator TraJ family protein | - |
| P5708_RS25070 (92670) | 92670..93053 | - | 384 | WP_019842734.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| P5708_RS25075 (93329) | 93329..93976 | + | 648 | WP_019842735.1 | hypothetical protein | VF |
| P5708_RS25080 (94272) | 94272..95092 | - | 821 | Protein_105 | DUF932 domain-containing protein | - |
| P5708_RS25085 (95211) | 95211..95498 | - | 288 | WP_001523521.1 | hypothetical protein | - |
| P5708_RS25090 (96045) | 96045..96170 | - | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| P5708_RS25095 (96112) | 96112..96261 | - | 150 | Protein_108 | DUF5431 family protein | - |
| - (96268) | 96268..96462 | - | 195 | NuclAT_0 | - | Antitoxin Detail |
| - (96268) | 96268..96462 | - | 195 | NuclAT_0 | - | Antitoxin Detail |
| - (96268) | 96268..96462 | - | 195 | NuclAT_0 | - | Antitoxin Detail |
| - (96268) | 96268..96462 | - | 195 | NuclAT_0 | - | Antitoxin Detail |
| P5708_RS25100 (96452) | 96452..97235 | - | 784 | Protein_109 | plasmid SOS inhibition protein A | - |
| P5708_RS25105 (97232) | 97232..97666 | - | 435 | WP_001297861.1 | conjugation system SOS inhibitor PsiB | - |
| P5708_RS25110 (97721) | 97721..99685 | - | 1965 | WP_277708175.1 | ParB/RepB/Spo0J family partition protein | - |
| P5708_RS25115 (99751) | 99751..99984 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| P5708_RS25120 (100047) | 100047..100574 | - | 528 | WP_019842803.1 | single-stranded DNA-binding protein | - |
| P5708_RS25125 (100600) | 100600..100806 | - | 207 | WP_019842804.1 | hypothetical protein | - |
| P5708_RS25130 (100876) | 100876..101383 | + | 508 | Protein_115 | hypothetical protein | - |
| P5708_RS25135 (101362) | 101362..101553 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| P5708_RS25140 (101550) | 101550..101972 | - | 423 | WP_001587500.1 | DUF1380 family protein | - |
| P5708_RS25145 (102019) | 102019..102444 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| P5708_RS25150 (102834) | 102834..103005 | - | 172 | Protein_119 | hypothetical protein | - |
| P5708_RS25155 (103295) | 103295..104266 | - | 972 | WP_001519995.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| P5708_RS25160 (104266) | 104266..105432 | - | 1167 | WP_001519994.1 | hypothetical protein | VF |
| P5708_RS25165 (105895) | 105895..106092 | - | 198 | Protein_122 | CcdB family protein | - |
| P5708_RS25170 (106214) | 106214..106978 | + | 765 | Protein_123 | IS21 family transposase | - |
| P5708_RS25175 (107367) | 107367..107819 | - | 453 | WP_001519992.1 | acyltransferase | - |
| P5708_RS25180 (107966) | 107966..108353 | + | 388 | Protein_125 | hypothetical protein | - |
| P5708_RS25185 (108373) | 108373..108720 | - | 348 | WP_000142451.1 | DUF6404 family protein | - |
| P5708_RS25190 (108849) | 108849..109184 | + | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| P5708_RS25195 (109206) | 109206..110309 | - | 1104 | WP_277708275.1 | colicin Ia central receptor-binding domain-containing protein | - |
| P5708_RS25200 (110306) | 110306..111085 | - | 780 | WP_277708277.1 | colicin-Ia domain protein | - |
| P5708_RS25205 (111430) | 111430..111723 | - | 294 | WP_001097404.1 | YqjK-like family protein | - |
| P5708_RS25210 (111720) | 111720..112121 | - | 402 | WP_001519986.1 | phage holin family protein | - |
| P5708_RS25215 (112205) | 112205..112558 | - | 354 | WP_001519985.1 | hypothetical protein | - |
| P5708_RS25220 (112630) | 112630..112878 | - | 249 | WP_000467268.1 | DUF883 family protein | - |
| P5708_RS25225 (113463) | 113463..113780 | - | 318 | WP_000845366.1 | hypothetical protein | VF |
| P5708_RS25230 (114454) | 114454..115446 | - | 993 | WP_019842691.1 | hypothetical protein | - |
| P5708_RS25235 (115474) | 115474..115983 | - | 510 | WP_157918771.1 | Minor fimbrial protein PrsF | VF |
| P5708_RS25240 (116015) | 116015..116530 | - | 516 | WP_277708286.1 | hypothetical protein | VF |
| P5708_RS25245 (116567) | 116567..117298 | - | 732 | WP_277708288.1 | Chaperone protein PapD | VF |
| P5708_RS25250 (117367) | 117367..119877 | - | 2511 | WP_277708290.1 | Outer membrane usher protein PapC | VF |
| P5708_RS25255 (119998) | 119998..120585 | - | 588 | WP_019842696.1 | PAP fimbrial minor pilin protein | VF |
| P5708_RS25260 (120671) | 120671..121198 | - | 528 | WP_019842697.1 | Pap fimbrial major pilin protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|