MGE detailed information
MGE type: Genomic_island MGE length: 23926 bp
Accession: NZ_CP117554 Location: 448846..472771 Organism: Erwinia amylovora strain 99east-3-1 Replicon: chromosome
Accession: NZ_CP117554 Location: 448846..472771 Organism: Erwinia amylovora strain 99east-3-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTC76_RS02065 (PTC76_02065) | 444767..446044 | - | 1278 | WP_004155165.1 | DUF445 family protein | - |
| PTC76_RS02070 (PTC76_02070) | 446046..447545 | - | 1500 | WP_004155166.1 | DUF853 domain-containing protein | - |
| PTC76_RS02075 (PTC76_02075) | 447716..448225 | - | 510 | WP_004155168.1 | DUF2501 domain-containing protein | - |
| PTC76_RS02085 (PTC76_02085) | 448846..450123 | + | 1278 | WP_004155169.1 | hypothetical protein ; Integrase | Integrase |
| PTC76_RS02090 (PTC76_02090) | 450359..452005 | + | 1647 | WP_004155171.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| PTC76_RS02095 (PTC76_02095) | 452010..453332 | + | 1323 | WP_004155172.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| PTC76_RS02100 (PTC76_02100) | 453313..458393 | + | 5081 | Protein_410 | DNA phosphorothioation-dependent restriction protein DptH | - |
| PTC76_RS02105 (PTC76_02105) | 458390..459211 | + | 822 | WP_004155174.1 | restriction endonuclease | - |
| PTC76_RS02110 (PTC76_02110) | 459416..460786 | - | 1371 | WP_024015403.1 | class I SAM-dependent methyltransferase | - |
| PTC76_RS02115 (PTC76_02115) | 460791..461144 | - | 354 | WP_009349902.1 | DNA sulfur modification protein DndE | - |
| PTC76_RS02120 (PTC76_02120) | 461144..463144 | - | 2001 | WP_004155177.1 | DNA sulfur modification protein DndD | - |
| PTC76_RS02125 (PTC76_02125) | 463134..464768 | - | 1635 | WP_004155178.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| PTC76_RS02130 (PTC76_02130) | 464765..465850 | - | 1086 | WP_004155179.1 | DNA sulfur modification protein DndB | - |
| PTC76_RS02135 (PTC76_02135) | 466294..466644 | - | 351 | WP_004155181.1 | hypothetical protein | - |
| PTC76_RS02140 (PTC76_02140) | 466752..466949 | - | 198 | WP_004155182.1 | AlpA family phage regulatory protein | - |
| PTC76_RS02145 (PTC76_02145) | 468159..468401 | + | 243 | WP_004155184.1 | hypothetical protein | - |
| PTC76_RS02150 (PTC76_02150) | 468626..469200 | + | 575 | Protein_420 | DUF932 domain-containing protein | - |
| PTC76_RS02155 (PTC76_02155) | 469271..469741 | + | 471 | WP_004155187.1 | DNA repair protein RadC | - |
| PTC76_RS02160 (PTC76_02160) | 469754..470077 | + | 324 | WP_004155188.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PTC76_RS02165 (PTC76_02165) | 470114..470434 | + | 321 | WP_004155189.1 | TA system toxin CbtA family protein | Toxin Detail |
| PTC76_RS02170 (PTC76_02170) | 470547..471380 | + | 834 | WP_004155190.1 | DUF4942 domain-containing protein | - |
| PTC76_RS02175 (PTC76_02175) | 471477..471725 | + | 249 | WP_004155191.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| PTC76_RS02180 (PTC76_02180) | 471729..472004 | + | 276 | WP_004155192.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PTC76_RS02185 (PTC76_02185) | 472423..472623 | + | 201 | Protein_427 | IS3 family transposase IS1400 | Transposase |
| PTC76_RS02190 (PTC76_02190) | 472920..476285 | - | 3366 | WP_004155194.1 | ATP-binding protein | - |
| PTC76_RS02195 (PTC76_02195) | 476672..477229 | + | 558 | WP_004155195.1 | YecA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia amylovora ATCC 49946 | Genomic island | TA24692 | NC_013971 | 3302629..3325491 | 0.001 | |
| Erwinia amylovora strain CTBT3-1 tig00000000 | Genomic island | TA10128, TA294492 | NZ_NQJO01000001 | 3404618..3427747 | 0.001 |