MGE detailed information
MGE type: Prophage MGE length: 34798 bp
Accession: NZ_CP114892 Location: 849012..883809 Organism: Escherichia coli strain CM5 Replicon: chromosome
Accession: NZ_CP114892 Location: 849012..883809 Organism: Escherichia coli strain CM5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O6Q95_RS04160 (845527) | 845527..846273 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| O6Q95_RS04165 (846362) | 846362..847048 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| O6Q95_RS04170 (847225) | 847225..847428 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| O6Q95_RS04175 (847463) | 847463..848923 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| O6Q95_RS04180 (849012) | 849012..850379 | - | 1368 | Protein_823 | MHS family MFS transporter | - |
| O6Q95_RS04185 (850900) | 850900..851013 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| O6Q95_RS04190 (851082) | 851082..851315 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| O6Q95_RS04195 (851632) | 851632..852222 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| O6Q95_RS04200 (852320) | 852320..852895 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| O6Q95_RS04205 (852895) | 852895..853857 | - | 963 | WP_001027733.1 | phage tail protein | - |
| O6Q95_RS04210 (853808) | 853808..854377 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| O6Q95_RS04215 (854766) | 854766..854999 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| O6Q95_RS04220 (855057) | 855057..855467 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| O6Q95_RS04225 (855619) | 855619..855792 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| O6Q95_RS04230 (855964) | 855964..856119 | - | 156 | WP_001309517.1 | protein YnfN | - |
| O6Q95_RS04235 (856198) | 856198..856263 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| O6Q95_RS04240 (856266) | 856266..856454 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| O6Q95_RS04245 (856465) | 856465..856677 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| O6Q95_RS04250 (857040) | 857040..857537 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| O6Q95_RS04255 (857534) | 857534..858067 | - | 534 | WP_001092971.1 | lysozyme | - |
| O6Q95_RS04260 (858064) | 858064..858375 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| O6Q95_RS04265 (858380) | 858380..858595 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| O6Q95_RS04270 (858815) | 858815..858985 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| O6Q95_RS04275 (859349) | 859349..859564 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| O6Q95_RS04280 (859865) | 859865..860077 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| O6Q95_RS04285 (860132) | 860132..860221 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| O6Q95_RS04290 (860499) | 860499..861251 | - | 753 | WP_001047135.1 | antitermination protein | - |
| O6Q95_RS04295 (861265) | 861265..862314 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| O6Q95_RS04300 (862316) | 862316..862594 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| O6Q95_RS04305 (862661) | 862661..862912 | - | 252 | WP_000980994.1 | protein Rem | - |
| O6Q95_RS04310 (863129) | 863129..863284 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| O6Q95_RS04315 (863356) | 863356..863643 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| O6Q95_RS04320 (863643) | 863643..863882 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| O6Q95_RS04325 (863907) | 863907..864212 | + | 306 | WP_001326990.1 | protein YdfV | - |
| O6Q95_RS04330 (864415) | 864415..864747 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| O6Q95_RS04335 (865184) | 865184..865333 | - | 150 | WP_011443592.1 | protein YdfW | - |
| O6Q95_RS04340 (865368) | 865368..865646 | - | 279 | Protein_855 | protein YdfX | - |
| O6Q95_RS04345 (865630) | 865630..865860 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| O6Q95_RS04350 (865944) | 865944..866351 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| O6Q95_RS04355 (866518) | 866518..866673 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| O6Q95_RS04360 (866675) | 866675..866803 | + | 129 | WP_000344964.1 | protein YdfB | - |
| O6Q95_RS04365 (866833) | 866833..867051 | + | 219 | WP_001171942.1 | protein YdfC | - |
| O6Q95_RS04370 (867619) | 867619..867807 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| O6Q95_RS04375 (867804) | 867804..867995 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| O6Q95_RS04380 (868088) | 868088..868855 | + | 768 | Protein_863 | exonuclease | - |
| O6Q95_RS04385 (868852) | 868852..869547 | + | 696 | Protein_864 | IS3 family transposase IS2 | Transposase |
| O6Q95_RS04390 (869561) | 869561..869866 | + | 306 | Protein_865 | DUF3596 domain-containing protein | - |
| O6Q95_RS04400 (871197) | 871197..872054 | + | 858 | Protein_867 | Putative defective protein IntQ ; Integrase | Integrase |
| O6Q95_RS04405 (872242) | 872242..873261 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| O6Q95_RS04410 (873273) | 873273..874487 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| O6Q95_RS04415 (874693) | 874693..875019 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| O6Q95_RS04420 (875154) | 875154..875495 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| O6Q95_RS04425 (875530) | 875530..876090 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| O6Q95_RS04430 (876093) | 876093..876803 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| O6Q95_RS04435 (876911) | 876911..877216 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| O6Q95_RS04440 (877415) | 877415..879841 | + | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| O6Q95_RS04445 (879902) | 879902..882325 | + | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| O6Q95_RS04450 (882336) | 882336..882953 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| O6Q95_RS04455 (882955) | 882955..883809 | + | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| O6Q95_RS04460 (883852) | 883852..884466 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| O6Q95_RS04465 (884625) | 884625..885917 | + | 1293 | WP_071592181.1 | voltage-gated ClC-type chloride channel ClcB | - |
| O6Q95_RS04470 (885870) | 885870..886565 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| O6Q95_RS04475 (886690) | 886690..887910 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0 |