MGE detailed information
MGE type: Conjugative plasmid MGE length: 123389 bp
Accession: NZ_CP113487 Location: 1..123389 Organism: Escherichia coli strain GTEN_23 Replicon: plasmid unnamed1
Accession: NZ_CP113487 Location: 1..123389 Organism: Escherichia coli strain GTEN_23 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FG550_RS25000 (139) | 139..501 | - | 363 | Protein_0 | fluoride efflux transporter CrcB | - |
| FG550_RS25005 (543) | 543..1238 | + | 696 | Protein_1 | IS1-like element IS1A family transposase | - |
| FG550_RS25010 (1435) | 1435..1929 | - | 495 | Protein_2 | DUF4113 domain-containing protein | - |
| FG550_RS25015 (2097) | 2097..2417 | - | 321 | Protein_3 | IS21 family transposase IS21 | Transposase |
| FG550_RS25020 (3161) | 3161..4138 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| FG550_RS25025 (4417) | 4417..5157 | - | 741 | WP_001066947.1 | IS91 family transposase ISMno23 | Transposase |
| FG550_RS25030 (5278) | 5278..5466 | - | 189 | WP_001332784.1 | hypothetical protein | - |
| FG550_RS25040 (6310) | 6310..6609 | - | 300 | Protein_8 | IS3 family transposase IS2 | Transposase |
| FG550_RS25050 (7967) | 7967..8215 | - | 249 | Protein_10 | IS21 family transposase IS21 | Transposase |
| FG550_RS25055 (8698) | 8698..9450 | + | 753 | WP_000471454.1 | Chaperone protein caf1M | VF |
| FG550_RS25060 (9477) | 9477..12029 | + | 2553 | WP_001563703.1 | F1 capsule-anchoring protein | VF |
| FG550_RS25065 (12045) | 12045..12461 | + | 417 | WP_001563702.1 | Protein AfaD | VF |
| FG550_RS25070 (12575) | 12575..13060 | + | 486 | WP_001545321.1 | Dr family adhesin structural subunit | - |
| FG550_RS25080 (14830) | 14830..15246 | + | 417 | WP_000466682.1 | SdiA-regulated domain-containing protein | - |
| FG550_RS25085 (15451) | 15451..16182 | - | 732 | WP_224955279.1 | Virulence regulon transcriptional activator VirF | VF |
| FG550_RS25090 (16567) | 16567..17072 | + | 506 | Protein_18 | IS3 family transposase IS3H | Transposase |
| FG550_RS25095 (17065) | 17065..17178 | + | 114 | Protein_19 | integrase core domain-containing protein | - |
| FG550_RS25100 (17328) | 17328..18326 | + | 999 | WP_001563698.1 | ABC transporter substrate-binding protein | - |
| FG550_RS25105 (18326) | 18326..19363 | + | 1038 | WP_001545318.1 | Hemin transport system permease protein HmuU | VF |
| FG550_RS25110 (19363) | 19363..20124 | + | 762 | WP_000020504.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| FG550_RS25115 (20181) | 20181..21368 | + | 1188 | WP_025999368.1 | MFS transporter | - |
| FG550_RS25120 (21446) | 21446..21721 | - | 276 | WP_000877662.1 | bacteriocin immunity protein | - |
| FG550_RS25125 (22079) | 22079..22378 | - | 300 | WP_000119542.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FG550_RS25130 (22368) | 22368..22631 | - | 264 | WP_001089474.1 | hypothetical protein | - |
| FG550_RS25135 (22651) | 22651..22788 | - | 138 | Protein_27 | XRE family transcriptional regulator | - |
| FG550_RS25140 (23208) | 23208..23666 | - | 459 | WP_001236002.1 | hypothetical protein | - |
| FG550_RS25145 (23807) | 23807..24655 | - | 849 | WP_001057995.1 | 3'-5' exonuclease | - |
| FG550_RS25150 (24771) | 24771..24920 | - | 150 | Protein_30 | IS3 family transposase | - |
| FG550_RS25155 (24959) | 24959..25147 | - | 189 | Protein_31 | transposase domain-containing protein | - |
| FG550_RS25160 (25208) | 25208..25522 | + | 315 | Protein_32 | IS110 family transposase ISEc45 | Transposase |
| FG550_RS25170 (26830) | 26830..27291 | + | 462 | Protein_34 | IS5 family transposase ISKpn26 | Transposase |
| FG550_RS25175 (27441) | 27441..28073 | - | 633 | Protein_35 | histidine-type phosphatase | - |
| FG550_RS25180 (28195) | 28195..28680 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| FG550_RS25185 (28705) | 28705..29190 | - | 486 | WP_001554949.1 | TlpA disulfide reductase family protein | - |
| FG550_RS25190 (29177) | 29177..29872 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| FG550_RS25195 (29877) | 29877..31007 | - | 1131 | WP_001563733.1 | ABC transporter permease | - |
| FG550_RS25200 (30997) | 30997..32280 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| FG550_RS25205 (32283) | 32283..33662 | - | 1380 | WP_001563732.1 | Fe-S-containing protein | - |
| FG550_RS25210 (33766) | 33766..34293 | - | 528 | WP_000178050.1 | iron transporter | - |
| FG550_RS25215 (34334) | 34334..36220 | - | 1887 | WP_126709018.1 | FTR1 family protein | - |
| FG550_RS25220 (36567) | 36567..37382 | - | 816 | WP_195339664.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| FG550_RS25230 (38534) | 38534..39196 | + | 663 | WP_011977763.1 | IS6 family transposase IS26 | Transposase |
| FG550_RS25235 (39250) | 39250..39417 | + | 168 | Protein_47 | IS110 family transposase | - |
| FG550_RS25240 (39795) | 39795..41267 | - | 1473 | WP_000621194.1 | ATP-binding protein | - |
| FG550_RS25245 (41264) | 41264..41986 | - | 723 | WP_001057737.1 | Transcriptional regulatory protein WalR | VF |
| FG550_RS25250 (42128) | 42128..42727 | + | 600 | WP_001177183.1 | cytochrome b/b6 domain-containing protein | - |
| FG550_RS25255 (42738) | 42738..43508 | + | 771 | WP_000712166.1 | molybdopterin-dependent oxidoreductase | - |
| FG550_RS25260 (43538) | 43538..43795 | + | 258 | WP_021579169.1 | hypothetical protein | - |
| FG550_RS25265 (43945) | 43945..44043 | - | 99 | WP_137491101.1 | transposase | - |
| FG550_RS25270 (44236) | 44236..44544 | + | 309 | Protein_54 | IS91 family transposase ISSbo1 | Transposase |
| FG550_RS25275 (45572) | 45572..46429 | - | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
| FG550_RS25280 (46422) | 46422..46904 | - | 483 | WP_001273588.1 | hypothetical protein | - |
| FG550_RS25285 (46897) | 46897..46944 | - | 48 | WP_229471593.1 | hypothetical protein | - |
| FG550_RS25290 (46935) | 46935..47186 | + | 252 | WP_223195197.1 | replication protein RepA | - |
| FG550_RS25295 (47203) | 47203..47460 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| FG550_RS25300 (47744) | 47744..47893 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (47937) | 47937..47998 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (47937) | 47937..47998 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (47937) | 47937..47998 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (47937) | 47937..47998 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| FG550_RS25305 (48254) | 48254..48328 | - | 75 | Protein_61 | endonuclease | - |
| FG550_RS25310 (48574) | 48574..48786 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| FG550_RS25315 (48922) | 48922..49482 | - | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| FG550_RS25320 (49585) | 49585..50445 | - | 861 | WP_000704513.1 | Quorum-quenching protein AidA | VF |
| FG550_RS25325 (50504) | 50504..50998 | - | 495 | WP_001563729.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| FG550_RS25330 (51018) | 51018..56288 | - | 5271 | WP_096940158.1 | Multifunctional conjugation protein TraI | Relaxase |
| FG550_RS25335 (56370) | 56370..56597 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FG550_RS25340 (56597) | 56597..56995 | + | 399 | WP_000911333.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| FG550_RS25345 (57004) | 57004..58008 | - | 1005 | Protein_69 | type IV secretion system DNA-binding domain-containing protein | - |
| FG550_RS25350 (58116) | 58116..58952 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| FG550_RS25355 (58952) | 58952..59755 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| FG550_RS25360 (59816) | 59816..60631 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| FG550_RS25365 (60965) | 60965..61168 | + | 204 | WP_000131876.1 | hypothetical protein | - |
| FG550_RS25370 (61159) | 61159..61380 | + | 222 | WP_001251694.1 | hypothetical protein | - |
| FG550_RS25375 (61615) | 61615..61974 | - | 360 | WP_000050069.1 | hypothetical protein | - |
| FG550_RS25380 (62131) | 62131..62991 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| FG550_RS25385 (63282) | 63282..63986 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FG550_RS25390 (64039) | 64039..64782 | - | 744 | Protein_78 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| FG550_RS25395 (64779) | 64779..66152 | - | 1374 | WP_000944319.1 | conjugal transfer pilus assembly protein TraH | - |
| FG550_RS25400 (66139) | 66139..66531 | - | 393 | Protein_80 | F-type conjugal transfer protein TrbF | - |
| FG550_RS25405 (66518) | 66518..66859 | - | 342 | WP_001442101.1 | P-type conjugative transfer protein TrbJ | - |
| FG550_RS25410 (66789) | 66789..67334 | - | 546 | WP_001563719.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FG550_RS25415 (67321) | 67321..67605 | - | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FG550_RS25420 (67686) | 67686..67961 | + | 276 | WP_001513501.1 | hypothetical protein | - |
| FG550_RS25425 (67963) | 67963..68310 | - | 348 | WP_001287907.1 | conjugal transfer protein TrbA | - |
| FG550_RS25430 (68326) | 68326..69069 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FG550_RS25435 (69062) | 69062..69319 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| FG550_RS25440 (69346) | 69346..71154 | - | 1809 | WP_000821867.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FG550_RS25445 (71151) | 71151..71789 | - | 639 | WP_000777703.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FG550_RS25450 (71798) | 71798..72790 | - | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| FG550_RS25455 (72787) | 72787..73419 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| FG550_RS25460 (73416) | 73416..73802 | - | 387 | WP_000099688.1 | type-F conjugative transfer system protein TrbI | - |
| FG550_RS25465 (73799) | 73799..76426 | - | 2628 | WP_001563716.1 | type IV secretion system protein TraC | - |
| FG550_RS25470 (76586) | 76586..76807 | - | 222 | WP_001278690.1 | conjugal transfer protein TraR | - |
| FG550_RS25475 (76942) | 76942..77457 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FG550_RS25480 (77454) | 77454..77705 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| FG550_RS25485 (77717) | 77717..77914 | - | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| FG550_RS25490 (77901) | 77901..78491 | - | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| FG550_RS25495 (78481) | 78481..79908 | - | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| FG550_RS25500 (79908) | 79908..80636 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| FG550_RS25505 (80623) | 80623..81189 | - | 567 | WP_001563715.1 | type IV conjugative transfer system protein TraE | - |
| FG550_RS25510 (81211) | 81211..81522 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| FG550_RS25515 (81537) | 81537..81902 | - | 366 | WP_000340276.1 | type IV conjugative transfer system pilin TraA | - |
| FG550_RS25520 (81936) | 81936..82163 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| FG550_RS25525 (82258) | 82258..82944 | - | 687 | WP_001563714.1 | PAS domain-containing protein | - |
| FG550_RS25530 (83134) | 83134..83517 | - | 384 | WP_001563713.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| FG550_RS25535 (83851) | 83851..84441 | + | 591 | WP_001375132.1 | hypothetical protein | VF |
| FG550_RS25540 (84737) | 84737..85558 | - | 822 | WP_001234475.1 | DUF932 domain-containing protein | - |
| FG550_RS25545 (85677) | 85677..85963 | - | 287 | Protein_109 | hypothetical protein | - |
| FG550_RS25550 (85988) | 85988..86194 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| FG550_RS25555 (86264) | 86264..86560 | + | 297 | Protein_111 | hypothetical protein | - |
| FG550_RS25560 (86861) | 86861..86986 | - | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| FG550_RS25565 (86928) | 86928..87077 | - | 150 | Protein_113 | DUF5431 family protein | - |
| - (87084) | 87084..87282 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (87084) | 87084..87282 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (87084) | 87084..87282 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (87084) | 87084..87282 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| FG550_RS25570 (87251) | 87251..88013 | - | 763 | Protein_114 | plasmid SOS inhibition protein A | - |
| FG550_RS25575 (88010) | 88010..88444 | - | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
| FG550_RS25580 (88499) | 88499..89338 | - | 840 | Protein_116 | hypothetical protein | - |
| FG550_RS25585 (89533) | 89533..91074 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| FG550_RS25590 (91089) | 91089..91835 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| FG550_RS25595 (91922) | 91922..93043 | - | 1122 | Protein_119 | ParB/RepB/Spo0J family partition protein | - |
| FG550_RS25600 (93109) | 93109..93342 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| FG550_RS25605 (93399) | 93399..93896 | - | 498 | WP_050559392.1 | single-stranded DNA-binding protein | - |
| FG550_RS25610 (94046) | 94046..95947 | - | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| FG550_RS25615 (96917) | 96917..97427 | + | 511 | Protein_123 | hypothetical protein | - |
| FG550_RS25620 (97397) | 97397..97588 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| FG550_RS25625 (97585) | 97585..98007 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| FG550_RS25630 (98054) | 98054..98479 | - | 426 | WP_001198920.1 | antirestriction protein | - |
| FG550_RS25635 (98660) | 98660..99436 | - | 777 | WP_001005032.1 | hypothetical protein | - |
| FG550_RS25640 (99482) | 99482..100036 | - | 555 | WP_077635223.1 | DUF1380 family protein | - |
| FG550_RS25645 (99930) | 99930..100151 | - | 222 | WP_001104904.1 | hypothetical protein | - |
| FG550_RS25650 (100152) | 100152..100835 | - | 684 | WP_000085939.1 | DNA methylase | - |
| FG550_RS25655 (100912) | 100912..101217 | - | 306 | WP_010892536.1 | hypothetical protein | - |
| FG550_RS25660 (101221) | 101221..102122 | - | 902 | Protein_132 | DUF1281 domain-containing protein | - |
| FG550_RS25665 (102903) | 102903..103874 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| FG550_RS25670 (103874) | 103874..105040 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| FG550_RS25675 (105628) | 105628..106383 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| FG550_RS25680 (107105) | 107105..107911 | - | 807 | WP_000016970.1 | site-specific integrase | - |
| FG550_RS25685 (107912) | 107912..108217 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| FG550_RS25690 (108219) | 108219..108437 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| FG550_RS25695 (109064) | 109064..109294 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| FG550_RS25700 (109291) | 109291..109707 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| FG550_RS25705 (109782) | 109782..111347 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| FG550_RS25710 (111332) | 111332..112354 | + | 1023 | WP_001563708.1 | hypothetical protein | - |
| FG550_RS25720 (113830) | 113830..116031 | - | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| FG550_RS25725 (116057) | 116057..117390 | - | 1334 | Protein_145 | L-lysine N6-monooxygenase | VF |
| FG550_RS25730 (117387) | 117387..119129 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| FG550_RS25735 (119129) | 119129..120076 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| FG550_RS25740 (120077) | 120077..121801 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| FG550_RS25745 (121937) | 121937..123130 | + | 1194 | WP_001563706.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|