MGE detailed information
MGE type: Prophage MGE length: 34798 bp
Accession: NZ_CP110016 Location: 1718643..1753440 Organism: Escherichia coli strain HE_100 Replicon: chromosome
Accession: NZ_CP110016 Location: 1718643..1753440 Organism: Escherichia coli strain HE_100 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OLR74_RS08470 (1715158) | 1715158..1715904 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| OLR74_RS08475 (1715993) | 1715993..1716679 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| OLR74_RS08480 (1716856) | 1716856..1717059 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| OLR74_RS08485 (1717094) | 1717094..1718554 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| OLR74_RS08490 (1718643) | 1718643..1720010 | - | 1368 | Protein_1660 | MHS family MFS transporter | - |
| OLR74_RS08495 (1720531) | 1720531..1720644 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| OLR74_RS08500 (1720713) | 1720713..1720946 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| OLR74_RS08505 (1721263) | 1721263..1721853 | + | 591 | WP_282983535.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| OLR74_RS08510 (1721951) | 1721951..1722526 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| OLR74_RS08515 (1722526) | 1722526..1723488 | - | 963 | WP_001027733.1 | phage tail protein | - |
| OLR74_RS08520 (1723439) | 1723439..1724008 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| OLR74_RS08525 (1724397) | 1724397..1724630 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| OLR74_RS08530 (1724688) | 1724688..1725098 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| OLR74_RS08535 (1725250) | 1725250..1725423 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| OLR74_RS08540 (1725595) | 1725595..1725750 | - | 156 | WP_001309517.1 | protein YnfN | - |
| OLR74_RS08545 (1725829) | 1725829..1725894 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| OLR74_RS08550 (1725897) | 1725897..1726085 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| OLR74_RS08555 (1726096) | 1726096..1726308 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| OLR74_RS08560 (1726671) | 1726671..1727168 | - | 498 | WP_160415407.1 | DUF2514 domain-containing protein | - |
| OLR74_RS08565 (1727165) | 1727165..1727698 | - | 534 | WP_001092971.1 | lysozyme | - |
| OLR74_RS08570 (1727695) | 1727695..1728006 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| OLR74_RS08575 (1728011) | 1728011..1728226 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| OLR74_RS08580 (1728446) | 1728446..1728616 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| OLR74_RS08585 (1728980) | 1728980..1729195 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| OLR74_RS08590 (1729496) | 1729496..1729708 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| OLR74_RS08595 (1729763) | 1729763..1729852 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| OLR74_RS08600 (1730130) | 1730130..1730882 | - | 753 | WP_001047135.1 | antitermination protein | - |
| OLR74_RS08605 (1730896) | 1730896..1731945 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| OLR74_RS08610 (1731947) | 1731947..1732225 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| OLR74_RS08615 (1732292) | 1732292..1732543 | - | 252 | WP_000980994.1 | protein Rem | - |
| OLR74_RS08620 (1732760) | 1732760..1732915 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| OLR74_RS08625 (1732987) | 1732987..1733274 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| OLR74_RS08630 (1733274) | 1733274..1733513 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| OLR74_RS08635 (1733538) | 1733538..1733843 | + | 306 | WP_001326990.1 | protein YdfV | - |
| OLR74_RS08640 (1734046) | 1734046..1734378 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| OLR74_RS08645 (1734815) | 1734815..1734964 | - | 150 | WP_011443592.1 | protein YdfW | - |
| OLR74_RS08650 (1734999) | 1734999..1735277 | - | 279 | Protein_1692 | protein YdfX | - |
| OLR74_RS08655 (1735261) | 1735261..1735491 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| OLR74_RS08660 (1735575) | 1735575..1735982 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| OLR74_RS08665 (1736149) | 1736149..1736304 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| OLR74_RS08670 (1736306) | 1736306..1736434 | + | 129 | WP_000344964.1 | protein YdfB | - |
| OLR74_RS08675 (1736464) | 1736464..1736682 | + | 219 | WP_001171942.1 | protein YdfC | - |
| OLR74_RS08680 (1737250) | 1737250..1737438 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| OLR74_RS08685 (1737435) | 1737435..1737626 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| OLR74_RS08690 (1737719) | 1737719..1738486 | + | 768 | Protein_1700 | exonuclease | - |
| OLR74_RS08695 (1738483) | 1738483..1739178 | + | 696 | Protein_1701 | IS3 family transposase IS2 | Transposase |
| OLR74_RS08700 (1739192) | 1739192..1739497 | + | 306 | Protein_1702 | DUF3596 domain-containing protein | - |
| OLR74_RS08710 (1740828) | 1740828..1741685 | + | 858 | Protein_1704 | Putative defective protein IntQ ; Integrase | Integrase |
| OLR74_RS08715 (1741873) | 1741873..1742892 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| OLR74_RS08720 (1742904) | 1742904..1744118 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| OLR74_RS08725 (1744324) | 1744324..1744650 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| OLR74_RS08730 (1744785) | 1744785..1745126 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| OLR74_RS08735 (1745161) | 1745161..1745721 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| OLR74_RS08740 (1745724) | 1745724..1746434 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| OLR74_RS08745 (1746542) | 1746542..1746847 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| OLR74_RS08750 (1747046) | 1747046..1749472 | + | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| OLR74_RS08755 (1749533) | 1749533..1751956 | + | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| OLR74_RS08760 (1751967) | 1751967..1752584 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| OLR74_RS08765 (1752586) | 1752586..1753440 | + | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| OLR74_RS08770 (1753483) | 1753483..1754097 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| OLR74_RS08775 (1754256) | 1754256..1755548 | + | 1293 | WP_071592181.1 | voltage-gated ClC-type chloride channel ClcB | - |
| OLR74_RS08780 (1755501) | 1755501..1756196 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| OLR74_RS08785 (1756321) | 1756321..1757541 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0 |