MGE detailed information
MGE type: Prophage MGE length: 34798 bp
Accession: NZ_CP110014 Location: 1718639..1753436 Organism: Escherichia coli strain HE_100-10 Replicon: chromosome
Accession: NZ_CP110014 Location: 1718639..1753436 Organism: Escherichia coli strain HE_100-10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OLR77_RS08465 (1715154) | 1715154..1715900 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| OLR77_RS08470 (1715989) | 1715989..1716675 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| OLR77_RS08475 (1716852) | 1716852..1717055 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| OLR77_RS08480 (1717090) | 1717090..1718550 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| OLR77_RS08485 (1718639) | 1718639..1720006 | - | 1368 | Protein_1659 | MHS family MFS transporter | - |
| OLR77_RS08490 (1720527) | 1720527..1720640 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| OLR77_RS08495 (1720709) | 1720709..1720942 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| OLR77_RS08500 (1721259) | 1721259..1721849 | + | 591 | WP_282983535.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| OLR77_RS08505 (1721947) | 1721947..1722522 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| OLR77_RS08510 (1722522) | 1722522..1723484 | - | 963 | WP_001027733.1 | phage tail protein | - |
| OLR77_RS08515 (1723435) | 1723435..1724004 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| OLR77_RS08520 (1724393) | 1724393..1724626 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| OLR77_RS08525 (1724684) | 1724684..1725094 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| OLR77_RS08530 (1725246) | 1725246..1725419 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| OLR77_RS08535 (1725591) | 1725591..1725746 | - | 156 | WP_001309517.1 | protein YnfN | - |
| OLR77_RS08540 (1725825) | 1725825..1725890 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| OLR77_RS08545 (1725893) | 1725893..1726081 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| OLR77_RS08550 (1726092) | 1726092..1726304 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| OLR77_RS08555 (1726667) | 1726667..1727164 | - | 498 | WP_160415407.1 | DUF2514 domain-containing protein | - |
| OLR77_RS08560 (1727161) | 1727161..1727694 | - | 534 | WP_001092971.1 | lysozyme | - |
| OLR77_RS08565 (1727691) | 1727691..1728002 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| OLR77_RS08570 (1728007) | 1728007..1728222 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| OLR77_RS08575 (1728442) | 1728442..1728612 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| OLR77_RS08580 (1728976) | 1728976..1729191 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| OLR77_RS08585 (1729492) | 1729492..1729704 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| OLR77_RS08590 (1729759) | 1729759..1729848 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| OLR77_RS08595 (1730126) | 1730126..1730878 | - | 753 | WP_001047135.1 | antitermination protein | - |
| OLR77_RS08600 (1730892) | 1730892..1731941 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| OLR77_RS08605 (1731943) | 1731943..1732221 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| OLR77_RS08610 (1732288) | 1732288..1732539 | - | 252 | WP_000980994.1 | protein Rem | - |
| OLR77_RS08615 (1732756) | 1732756..1732911 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| OLR77_RS08620 (1732983) | 1732983..1733270 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| OLR77_RS08625 (1733270) | 1733270..1733509 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| OLR77_RS08630 (1733534) | 1733534..1733839 | + | 306 | WP_001326990.1 | protein YdfV | - |
| OLR77_RS08635 (1734042) | 1734042..1734374 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| OLR77_RS08640 (1734811) | 1734811..1734960 | - | 150 | WP_011443592.1 | protein YdfW | - |
| OLR77_RS08645 (1734995) | 1734995..1735273 | - | 279 | Protein_1691 | protein YdfX | - |
| OLR77_RS08650 (1735257) | 1735257..1735487 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| OLR77_RS08655 (1735571) | 1735571..1735978 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| OLR77_RS08660 (1736145) | 1736145..1736300 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| OLR77_RS08665 (1736302) | 1736302..1736430 | + | 129 | WP_000344964.1 | protein YdfB | - |
| OLR77_RS08670 (1736460) | 1736460..1736678 | + | 219 | WP_001171942.1 | protein YdfC | - |
| OLR77_RS08675 (1737246) | 1737246..1737434 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| OLR77_RS08680 (1737431) | 1737431..1737622 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| OLR77_RS08685 (1737715) | 1737715..1738482 | + | 768 | Protein_1699 | exonuclease | - |
| OLR77_RS08690 (1738479) | 1738479..1739174 | + | 696 | Protein_1700 | IS3 family transposase IS2 | Transposase |
| OLR77_RS08695 (1739188) | 1739188..1739493 | + | 306 | Protein_1701 | DUF3596 domain-containing protein | - |
| OLR77_RS08705 (1740824) | 1740824..1741681 | + | 858 | Protein_1703 | Putative defective protein IntQ ; Integrase | Integrase |
| OLR77_RS08710 (1741869) | 1741869..1742888 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| OLR77_RS08715 (1742900) | 1742900..1744114 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| OLR77_RS08720 (1744320) | 1744320..1744646 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| OLR77_RS08725 (1744781) | 1744781..1745122 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| OLR77_RS08730 (1745157) | 1745157..1745717 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| OLR77_RS08735 (1745720) | 1745720..1746430 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| OLR77_RS08740 (1746538) | 1746538..1746843 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| OLR77_RS08745 (1747042) | 1747042..1749468 | + | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| OLR77_RS08750 (1749529) | 1749529..1751952 | + | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| OLR77_RS08755 (1751963) | 1751963..1752580 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| OLR77_RS08760 (1752582) | 1752582..1753436 | + | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| OLR77_RS08765 (1753479) | 1753479..1754093 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| OLR77_RS08770 (1754252) | 1754252..1755544 | + | 1293 | WP_071592181.1 | voltage-gated ClC-type chloride channel ClcB | - |
| OLR77_RS08775 (1755497) | 1755497..1756192 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| OLR77_RS08780 (1756317) | 1756317..1757537 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0 |