MGE detailed information
MGE type: Genomic_island MGE length: 43113 bp
Accession: NZ_CP109942 Location: 1875488..1918600 Organism: Streptococcus suis strain ID35541 Replicon: chromosome
Accession: NZ_CP109942 Location: 1875488..1918600 Organism: Streptococcus suis strain ID35541 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OHM48_RS09240 (OHM48_09240) | 1871430..1874549 | + | 3120 | WP_105155752.1 | DUF6359 domain-containing protein | - |
| OHM48_RS09245 (OHM48_09245) | 1874629..1875495 | + | 867 | WP_105155751.1 | Hsp33 family molecular chaperone HslO | - |
| OHM48_RS09250 (OHM48_09250) | 1875488..1876492 | + | 1005 | WP_002937787.1 | tRNA dihydrouridine synthase DusB | - |
| OHM48_RS09255 (OHM48_09255) | 1876638..1877411 | - | 774 | WP_012027854.1 | NUDIX domain-containing protein | - |
| OHM48_RS09260 (OHM48_09260) | 1877404..1878225 | - | 822 | WP_012027855.1 | nicotinamide riboside transporter PnuC | - |
| OHM48_RS09265 (OHM48_09265) | 1878235..1879272 | - | 1038 | WP_012028524.1 | AAA family ATPase | - |
| OHM48_RS09270 (OHM48_09270) | 1879386..1881839 | - | 2454 | WP_264490800.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| OHM48_RS09275 (OHM48_09275) | 1881845..1882303 | - | 459 | WP_012027859.1 | CtsR family transcriptional regulator | - |
| OHM48_RS09280 (OHM48_09280) | 1882453..1882791 | + | 339 | WP_012027860.1 | thioredoxin domain-containing protein | - |
| OHM48_RS09285 (OHM48_09285) | 1882791..1883492 | + | 702 | WP_012027861.1 | hypothetical protein | - |
| OHM48_RS09290 (OHM48_09290) | 1883646..1884686 | - | 1041 | WP_014736447.1 | translation elongation factor Ts | - |
| OHM48_RS09295 (OHM48_09295) | 1884840..1885616 | - | 777 | WP_012775356.1 | 30S ribosomal protein S2 | - |
| OHM48_RS09300 (OHM48_09300) | 1885964..1886476 | - | 513 | WP_014736448.1 | adenylate kinase | - |
| OHM48_RS09310 (OHM48_09310) | 1887130..1892199 | - | 5070 | WP_105155749.1 | S8 family serine peptidase | - |
| OHM48_RS09315 (OHM48_09315) | 1892347..1892886 | - | 540 | WP_002940254.1 | transcription termination/antitermination protein NusG | - |
| OHM48_RS09320 (OHM48_09320) | 1892996..1893172 | - | 177 | WP_002940255.1 | preprotein translocase subunit SecE | - |
| OHM48_RS09325 (OHM48_09325) | 1893182..1893334 | - | 153 | WP_002940258.1 | 50S ribosomal protein L33 | - |
| OHM48_RS09330 (OHM48_09330) | 1893368..1895581 | - | 2214 | WP_012027868.1 | penicillin-binding protein PBP2A | - |
| OHM48_RS09335 (OHM48_09335) | 1895734..1896702 | + | 969 | WP_012027869.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| OHM48_RS09340 (OHM48_09340) | 1896704..1897570 | + | 867 | WP_012027870.1 | RluA family pseudouridine synthase | - |
| OHM48_RS09345 (OHM48_09345) | 1897597..1898409 | - | 813 | WP_002938438.1 | pur operon repressor | - |
| OHM48_RS09350 (OHM48_09350) | 1898511..1899377 | - | 867 | WP_012027872.1 | phosphotransferase | - |
| OHM48_RS09355 (OHM48_09355) | 1899377..1900318 | - | 942 | WP_012775359.1 | 3'-5' exoribonuclease YhaM family protein | - |
| OHM48_RS09360 (OHM48_09360) | 1900308..1901546 | - | 1239 | WP_012775699.1 | DNA recombination protein RmuC | - |
| OHM48_RS09365 (OHM48_09365) | 1901547..1902179 | - | 633 | WP_012027875.1 | thiamine diphosphokinase | - |
| OHM48_RS09370 (OHM48_09370) | 1902172..1902831 | - | 660 | WP_012027876.1 | Ribulose-phosphate 3-epimerase | VF |
| OHM48_RS09375 (OHM48_09375) | 1902846..1903721 | - | 876 | WP_012027877.1 | ribosome small subunit-dependent GTPase A | - |
| OHM48_RS09385 (OHM48_09385) | 1904618..1906195 | - | 1578 | WP_012027878.1 | ABC transporter ATP-binding protein | - |
| OHM48_RS09390 (OHM48_09390) | 1906192..1907433 | - | 1242 | WP_014636518.1 | radical SAM protein | - |
| OHM48_RS09395 (OHM48_09395) | 1907802..1908665 | - | 864 | WP_012027880.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| OHM48_RS09400 (OHM48_09400) | 1909155..1911599 | - | 2445 | WP_012027881.1 | alkaline phosphatase family protein | - |
| OHM48_RS09405 (OHM48_09405) | 1911612..1913342 | - | 1731 | WP_012775361.1 | membrane protein | - |
| OHM48_RS09410 (OHM48_09410) | 1913707..1914579 | - | 873 | WP_012775362.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| OHM48_RS09415 (OHM48_09415) | 1914599..1915129 | - | 531 | WP_009910909.1 | DUF1697 domain-containing protein | - |
| OHM48_RS09420 (OHM48_09420) | 1915143..1915400 | - | 258 | WP_012775363.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| OHM48_RS09425 (OHM48_09425) | 1915402..1915662 | - | 261 | WP_002939010.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| OHM48_RS09430 (OHM48_09430) | 1915738..1916193 | - | 456 | WP_012028534.1 | 8-oxo-dGTP diphosphatase | - |
| OHM48_RS09435 (OHM48_09435) | 1916200..1916529 | - | 330 | WP_012775364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OHM48_RS09440 (OHM48_09440) | 1916519..1916806 | - | 288 | WP_012028535.1 | hypothetical protein | Antitoxin Detail |
| OHM48_RS09445 (OHM48_09445) | 1916904..1917272 | - | 369 | WP_012775453.1 | hypothetical protein | - |
| OHM48_RS09450 (OHM48_09450) | 1917265..1917834 | - | 570 | WP_012775700.1 | ribonuclease M5 | - |
| OHM48_RS09455 (OHM48_09455) | 1917818..1918600 | - | 783 | WP_012028536.1 | TatD family hydrolase | - |
| OHM48_RS09460 (OHM48_09460) | 1918707..1918844 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
| OHM48_RS09465 (OHM48_09465) | 1919012..1920007 | - | 996 | WP_012775367.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| OHM48_RS09470 (OHM48_09470) | 1920027..1920839 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
| OHM48_RS09475 (OHM48_09475) | 1920823..1921182 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
| OHM48_RS09480 (OHM48_09480) | 1921253..1922647 | - | 1395 | WP_012027899.1 | argininosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus suis SC84 | Genomic island | TA6281, TA10159 | NC_012924 | 1874993..1918220 | 0.004 | |
| Streptococcus suis strain ZY05719 isolate diseased pig | Genomic island | TA46538, TA46539 | NZ_CP007497 | 1873994..1917221 | 0.004 |