MGE detailed information
MGE type: Genomic_island MGE length: 43228 bp
Accession: NZ_CP102748 Location: 1870203..1913430 Organism: Streptococcus suis strain Transconjugant cSFJ45 Replicon: chromosome
Accession: NZ_CP102748 Location: 1870203..1913430 Organism: Streptococcus suis strain Transconjugant cSFJ45 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NWE21_RS09260 (NWE21_09270) | 1866145..1869264 | + | 3120 | WP_012775354.1 | DUF6359 domain-containing protein | - |
| NWE21_RS09265 (NWE21_09275) | 1869344..1870210 | + | 867 | WP_012027852.1 | Hsp33 family molecular chaperone HslO | - |
| NWE21_RS09270 (NWE21_09280) | 1870203..1871207 | + | 1005 | WP_012775355.1 | tRNA dihydrouridine synthase DusB | - |
| NWE21_RS09275 (NWE21_09285) | 1871353..1872126 | - | 774 | WP_012027854.1 | NUDIX domain-containing protein | - |
| NWE21_RS09280 (NWE21_09290) | 1872119..1872940 | - | 822 | WP_012027855.1 | nicotinamide riboside transporter PnuC | - |
| NWE21_RS09285 (NWE21_09295) | 1872950..1873987 | - | 1038 | WP_012028524.1 | AAA family ATPase | - |
| NWE21_RS09290 (NWE21_09300) | 1874101..1876554 | - | 2454 | WP_012027858.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| NWE21_RS09295 (NWE21_09305) | 1876560..1877018 | - | 459 | WP_012027859.1 | CtsR family transcriptional regulator | - |
| NWE21_RS09300 (NWE21_09310) | 1877168..1877506 | + | 339 | WP_012027860.1 | thioredoxin domain-containing protein | - |
| NWE21_RS09305 (NWE21_09315) | 1877506..1878207 | + | 702 | WP_012027861.1 | hypothetical protein | - |
| NWE21_RS09310 (NWE21_09320) | 1878470..1879510 | - | 1041 | WP_012027862.1 | translation elongation factor Ts | - |
| NWE21_RS09315 (NWE21_09325) | 1879666..1880442 | - | 777 | WP_012775356.1 | 30S ribosomal protein S2 | - |
| NWE21_RS09320 (NWE21_09330) | 1880789..1881301 | - | 513 | WP_012775452.1 | adenylate kinase | - |
| NWE21_RS09330 (NWE21_09340) | 1881955..1887033 | - | 5079 | WP_012775357.1 | S8 family serine peptidase | - |
| NWE21_RS09335 (NWE21_09345) | 1887177..1887716 | - | 540 | WP_002940254.1 | transcription termination/antitermination protein NusG | - |
| NWE21_RS09340 (NWE21_09350) | 1887826..1888002 | - | 177 | WP_002940255.1 | preprotein translocase subunit SecE | - |
| NWE21_RS09345 (NWE21_09355) | 1888012..1888164 | - | 153 | WP_002940258.1 | 50S ribosomal protein L33 | - |
| NWE21_RS09350 (NWE21_09360) | 1888198..1890411 | - | 2214 | WP_012027868.1 | penicillin-binding protein PBP2A | - |
| NWE21_RS09355 (NWE21_09365) | 1890564..1891532 | + | 969 | WP_012027869.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| NWE21_RS09360 (NWE21_09370) | 1891534..1892400 | + | 867 | WP_012027870.1 | RluA family pseudouridine synthase | - |
| NWE21_RS09365 (NWE21_09375) | 1892427..1893239 | - | 813 | WP_002938438.1 | pur operon repressor | - |
| NWE21_RS09370 (NWE21_09380) | 1893341..1894207 | - | 867 | WP_012027872.1 | phosphotransferase | - |
| NWE21_RS09375 (NWE21_09385) | 1894207..1895148 | - | 942 | WP_012775359.1 | 3'-5' exoribonuclease YhaM family protein | - |
| NWE21_RS09380 (NWE21_09390) | 1895138..1896376 | - | 1239 | WP_012027874.1 | DNA recombination protein RmuC | - |
| NWE21_RS09385 (NWE21_09395) | 1896377..1897009 | - | 633 | WP_012027875.1 | thiamine diphosphokinase | - |
| NWE21_RS09390 (NWE21_09400) | 1897002..1897661 | - | 660 | WP_012027876.1 | Ribulose-phosphate 3-epimerase | VF |
| NWE21_RS09395 (NWE21_09405) | 1897676..1898551 | - | 876 | WP_012027877.1 | ribosome small subunit-dependent GTPase A | - |
| NWE21_RS09405 (NWE21_09415) | 1899448..1901025 | - | 1578 | WP_012027878.1 | ABC transporter ATP-binding protein | - |
| NWE21_RS09410 (NWE21_09420) | 1901022..1902263 | - | 1242 | WP_014636518.1 | radical SAM protein | - |
| NWE21_RS09415 (NWE21_09425) | 1902632..1903495 | - | 864 | WP_012027880.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| NWE21_RS09420 (NWE21_09430) | 1903985..1906429 | - | 2445 | WP_012027881.1 | alkaline phosphatase family protein | - |
| NWE21_RS09425 (NWE21_09435) | 1906442..1908172 | - | 1731 | WP_012775361.1 | membrane protein | - |
| NWE21_RS09430 (NWE21_09440) | 1908537..1909409 | - | 873 | WP_012775362.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| NWE21_RS09435 (NWE21_09445) | 1909429..1909959 | - | 531 | WP_009910909.1 | DUF1697 domain-containing protein | - |
| NWE21_RS09440 (NWE21_09450) | 1909973..1910230 | - | 258 | WP_012775363.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| NWE21_RS09445 (NWE21_09455) | 1910232..1910492 | - | 261 | WP_002939010.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NWE21_RS09450 (NWE21_09460) | 1910568..1911023 | - | 456 | WP_012028534.1 | 8-oxo-dGTP diphosphatase | - |
| NWE21_RS09455 (NWE21_09465) | 1911030..1911359 | - | 330 | WP_012775364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NWE21_RS09460 (NWE21_09470) | 1911349..1911636 | - | 288 | WP_012028535.1 | hypothetical protein | Antitoxin Detail |
| NWE21_RS09465 (NWE21_09475) | 1911734..1912102 | - | 369 | WP_012775453.1 | hypothetical protein | - |
| NWE21_RS09470 (NWE21_09480) | 1912095..1912664 | - | 570 | WP_012775366.1 | ribonuclease M5 | - |
| NWE21_RS09475 (NWE21_09485) | 1912648..1913430 | - | 783 | WP_012028536.1 | TatD family hydrolase | - |
| NWE21_RS09480 (NWE21_09490) | 1913537..1913674 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
| NWE21_RS09485 (NWE21_09495) | 1913842..1914837 | - | 996 | WP_012775367.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| NWE21_RS09490 (NWE21_09500) | 1914857..1915669 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
| NWE21_RS09495 (NWE21_09505) | 1915653..1916012 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
| NWE21_RS09500 (NWE21_09510) | 1916083..1917477 | - | 1395 | WP_012027899.1 | argininosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus suis SC84 | Genomic island | TA6281, TA10159 | NC_012924 | 1874993..1918220 | 0 | |
| Streptococcus suis strain ZY05719 isolate diseased pig | Genomic island | TA46538, TA46539 | NZ_CP007497 | 1873994..1917221 | 0 |