MGE detailed information
MGE type: Prophage MGE length: 26869 bp
Accession: NZ_CP093221 Location: 3343923..3370791 Organism: Escherichia coli strain ER2683 Replicon: chromosome
Accession: NZ_CP093221 Location: 3343923..3370791 Organism: Escherichia coli strain ER2683 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MNV48_RS16130 (3341298) | 3341298..3343724 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| MNV48_RS16135 (3343923) | 3343923..3344228 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| MNV48_RS16140 (3344336) | 3344336..3345046 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| MNV48_RS16145 (3345049) | 3345049..3345609 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| MNV48_RS16150 (3345644) | 3345644..3345985 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| MNV48_RS16155 (3346120) | 3346120..3346446 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| MNV48_RS16160 (3346652) | 3346652..3347866 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| MNV48_RS16165 (3347878) | 3347878..3348897 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| MNV48_RS16170 (3349085) | 3349085..3350242 | - | 1158 | Protein_3156 | Tyrosine recombinase XerD ; Integrase | Integrase |
| MNV48_RS16175 (3350256) | 3350256..3350951 | - | 696 | Protein_3157 | IS3 family transposase IS2 | Transposase |
| MNV48_RS16180 (3350948) | 3350948..3351715 | - | 768 | Protein_3158 | exonuclease | - |
| MNV48_RS16185 (3351808) | 3351808..3351999 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| MNV48_RS16190 (3351996) | 3351996..3352184 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| MNV48_RS16195 (3352752) | 3352752..3352970 | - | 219 | WP_001171942.1 | protein YdfC | - |
| MNV48_RS22900 (3353000) | 3353000..3353128 | - | 129 | WP_000344964.1 | protein YdfB | - |
| MNV48_RS16200 (3353130) | 3353130..3353285 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| MNV48_RS16205 (3353452) | 3353452..3353859 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| MNV48_RS16210 (3353943) | 3353943..3354173 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| MNV48_RS16215 (3354157) | 3354157..3354435 | + | 279 | Protein_3166 | protein YdfX | - |
| MNV48_RS16220 (3354470) | 3354470..3354619 | + | 150 | WP_011443592.1 | protein YdfW | - |
| MNV48_RS16225 (3355056) | 3355056..3355388 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| MNV48_RS16230 (3355591) | 3355591..3355896 | - | 306 | WP_001326990.1 | protein YdfV | - |
| MNV48_RS16235 (3355921) | 3355921..3356160 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| MNV48_RS16240 (3356160) | 3356160..3356447 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| MNV48_RS16245 (3356519) | 3356519..3356674 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| MNV48_RS16250 (3356891) | 3356891..3357142 | + | 252 | WP_000980994.1 | protein Rem | - |
| MNV48_RS16255 (3357209) | 3357209..3357487 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| MNV48_RS16260 (3357489) | 3357489..3358538 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| MNV48_RS16265 (3358552) | 3358552..3359304 | + | 753 | WP_001047135.1 | antitermination protein | - |
| MNV48_RS16270 (3359582) | 3359582..3359671 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| MNV48_RS16275 (3359726) | 3359726..3359938 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| MNV48_RS16280 (3360239) | 3360239..3360454 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| MNV48_RS16285 (3360818) | 3360818..3360988 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| MNV48_RS16290 (3361208) | 3361208..3361423 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| MNV48_RS16295 (3361428) | 3361428..3361739 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| MNV48_RS16300 (3361736) | 3361736..3362269 | + | 534 | WP_001092971.1 | lysozyme | - |
| MNV48_RS16305 (3362266) | 3362266..3362763 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| MNV48_RS16310 (3363126) | 3363126..3363338 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| MNV48_RS16315 (3363349) | 3363349..3363537 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| MNV48_RS16320 (3363540) | 3363540..3363605 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| MNV48_RS16325 (3363684) | 3363684..3363839 | + | 156 | WP_001309517.1 | protein YnfN | - |
| MNV48_RS16330 (3364011) | 3364011..3364184 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| MNV48_RS16335 (3364336) | 3364336..3364746 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| MNV48_RS16340 (3364804) | 3364804..3365037 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| MNV48_RS16345 (3365426) | 3365426..3365995 | + | 570 | WP_000453612.1 | DNA-packaging protein | - |
| MNV48_RS16350 (3365946) | 3365946..3366908 | + | 963 | WP_001027733.1 | phage tail protein | - |
| MNV48_RS16355 (3366908) | 3366908..3367483 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| MNV48_RS16360 (3367581) | 3367581..3368171 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| MNV48_RS16365 (3368488) | 3368488..3368721 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| MNV48_RS16370 (3368790) | 3368790..3368903 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| MNV48_RS16375 (3369424) | 3369424..3370791 | + | 1368 | Protein_3198 | MHS family MFS transporter | - |
| MNV48_RS16380 (3370880) | 3370880..3372340 | + | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| MNV48_RS16385 (3372375) | 3372375..3372578 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| MNV48_RS16390 (3372755) | 3372755..3373441 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| MNV48_RS16395 (3373530) | 3373530..3374276 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0.006 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0.006 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0.007 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0.006 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0.009 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.004 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0.005 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0.006 |