NZ_CP0927021631002..1657870

MGE detailed information

MGE type: Prophage        MGE length: 26869 bp
Accession: NZ_CP092702        Location: 1631002..1657870         Organism: Escherichia coli strain S-P-C-029.01       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
MJ592_RS07965 (1627517) 1627517..1628263 + 747 WP_000636571.1 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG -
MJ592_RS07970 (1628352) 1628352..1629038 + 687 WP_000215549.1 DNA-binding transcriptional regulator rspR -
MJ592_RS07975 (1629215) 1629215..1629418 + 204 WP_000214712.1 putative selenium delivery protein YdfZ -
MJ592_RS07980 (1629453) 1629453..1630913 - 1461 WP_000527743.1 mannitol dehydrogenase family protein -
MJ592_RS07985 (1631002) 1631002..1632369 - 1368 Protein_1566 MHS family MFS transporter -
MJ592_RS07990 (1632890) 1632890..1633003 + 114 WP_120795384.1 YnaM/YnfT family protein -
MJ592_RS07995 (1633072) 1633072..1633305 + 234 WP_000836768.1 cold shock protein YdfK -
MJ592_RS08000 (1633622) 1633622..1634212 + 591 WP_000078177.1 Tn3 family transposase TnpR_ISSba14 Transposase
MJ592_RS08005 (1634310) 1634310..1634885 - 576 WP_000885611.1 tail fiber assembly protein -
MJ592_RS08010 (1634885) 1634885..1635847 - 963 WP_001027733.1 phage tail protein -
MJ592_RS08015 (1635798) 1635798..1636367 - 570 WP_000453612.1 DNA-packaging protein -
MJ592_RS08020 (1636756) 1636756..1636989 + 234 WP_001368374.1 YlcI/YnfO family protein -
MJ592_RS08025 (1637047) 1637047..1637457 + 411 WP_000373090.1 DUF1398 domain-containing protein -
MJ592_RS08030 (1637609) 1637609..1637782 - 174 WP_001019606.1 addiction module toxin, GnsA/GnsB family -
MJ592_RS08035 (1637954) 1637954..1638109 - 156 WP_001309517.1 protein YnfN -
MJ592_RS08040 (1638188) 1638188..1638253 - 66 WP_120795388.1 small protein YnfR -
MJ592_RS08045 (1638256) 1638256..1638444 - 189 WP_071524604.1 cold-shock protein -
MJ592_RS08050 (1638455) 1638455..1638667 - 213 WP_000066495.1 cold shock protein CspI -
MJ592_RS08055 (1639030) 1639030..1639527 - 498 WP_001071769.1 DUF2514 domain-containing protein -
MJ592_RS08060 (1639524) 1639524..1640057 - 534 WP_001092971.1 lysozyme -
MJ592_RS08065 (1640054) 1640054..1640365 - 312 WP_000189916.1 YdfR family protein -
MJ592_RS08070 (1640370) 1640370..1640585 - 216 WP_000839590.1 phage lysis protein EssD -
MJ592_RS08075 (1640805) 1640805..1640975 + 171 WP_211180497.1 putative zinc-binding protein YnfU -
MJ592_RS08080 (1641339) 1641339..1641554 - 216 WP_000066484.1 cold shock-like protein CspB -
MJ592_RS08085 (1641855) 1641855..1642067 + 213 WP_000087756.1 cold shock-like protein CspF -
MJ592_RS08090 (1642122) 1642122..1642211 + 90 WP_120795389.1 hypothetical protein -
MJ592_RS08095 (1642489) 1642489..1643241 - 753 WP_001047135.1 antitermination protein -
MJ592_RS08100 (1643255) 1643255..1644304 - 1050 WP_001393597.1 DUF968 domain-containing protein -
MJ592_RS08105 (1644306) 1644306..1644584 - 279 WP_012304870.1 hypothetical protein -
MJ592_RS08110 (1644651) 1644651..1644902 - 252 WP_000980994.1 protein Rem -
MJ592_RS08115 (1645119) 1645119..1645274 - 156 WP_000813254.1 type I toxin-antitoxin system toxin HokD -
MJ592_RS08120 (1645346) 1645346..1645633 - 288 WP_000323025.1 type II toxin-antitoxin system mRNA interferase RelE Toxin Detail
MJ592_RS08125 (1645633) 1645633..1645872 - 240 WP_000534858.1 type II toxin-antitoxin system antitoxin RelB Antitoxin Detail
MJ592_RS08130 (1645897) 1645897..1646202 + 306 WP_001326990.1 protein YdfV -
MJ592_RS08135 (1646405) 1646405..1646737 + 333 WP_001301033.1 FlxA-like family protein -
MJ592_RS08140 (1647174) 1647174..1647323 - 150 WP_011443592.1 protein YdfW -
MJ592_RS08145 (1647358) 1647358..1647636 - 279 Protein_1598 protein YdfX -
MJ592_RS08150 (1647620) 1647620..1647850 - 231 WP_000920568.1 dicB transcriptional regulator DicC -
MJ592_RS08155 (1647934) 1647934..1648341 + 408 WP_000448564.1 DNA-binding transcriptional dual regulator DicA -
MJ592_RS08160 (1648508) 1648508..1648663 + 156 WP_000379575.1 DUF1391 family protein -
MJ592_RS22590 (1648665) 1648665..1648793 + 129 WP_000344964.1 protein YdfB -
MJ592_RS08165 (1648823) 1648823..1649041 + 219 WP_001171942.1 protein YdfC -
MJ592_RS08170 (1649609) 1649609..1649797 + 189 WP_000854559.1 cell division inhibition protein DicB -
MJ592_RS08175 (1649794) 1649794..1649985 + 192 WP_001083297.1 lysis protein YdfD -
MJ592_RS08180 (1650078) 1650078..1650845 + 768 Protein_1606 exonuclease -
MJ592_RS08185 (1650842) 1650842..1651537 + 696 Protein_1607 IS3 family transposase IS2 Transposase
MJ592_RS08190 (1651551) 1651551..1652708 + 1158 Protein_1608 Tyrosine recombinase XerD ; Integrase Integrase
MJ592_RS08195 (1652896) 1652896..1653915 - 1020 WP_000836066.1 Zn-dependent oxidoreductase -
MJ592_RS08200 (1653927) 1653927..1655141 - 1215 WP_001295394.1 starvation-sensing protein RspA -
MJ592_RS08205 (1655347) 1655347..1655673 - 327 WP_000598292.1 YnfA family protein -
MJ592_RS08210 (1655808) 1655808..1656149 + 342 WP_000705211.1 DUF1283 family protein -
MJ592_RS08215 (1656184) 1656184..1656744 + 561 WP_001138581.1 spermidine N1-acetyltransferase -
MJ592_RS08220 (1656747) 1656747..1657457 - 711 WP_001321287.1 YnfC family lipoprotein -
MJ592_RS08225 (1657565) 1657565..1657870 + 306 WP_001300836.1 DUF1161 domain-containing protein -
MJ592_RS08230 (1658069) 1658069..1660495 + 2427 WP_000041675.1 DmsA/YnfE/YnfF family dimethyl sulfoxide reductase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Prophage TA20026 CP009789 1611431..1634475 0.007
Escherichia coli str. K-12 substr. MC4100 Prophage TA20067 HG738867 1519531..1552992 0.006
Escherichia coli str. K-12 substr. MG1655 Prophage TA1041 NC_000913 1631002..1664463 0.006
Escherichia coli str. K-12 substr. W3110 Prophage TA21438 NC_007779 1632716..1654422 0.005
Escherichia coli str. K-12 substr. DH10B Prophage TA22686 NC_010473 1718651..1753448 0.007
Escherichia coli BW2952 Prophage TA23854 NC_012759 1521085..1554546 0.006
Escherichia coli DH1 Prophage TA27404 NC_017638 1615804..1634890 0.009
Escherichia coli BW25113 Prophage TA48683 NZ_CP009273 1625259..1658720 0.006
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Prophage TA68425 NZ_CP017979 1534772..1559021 0.004
Escherichia coli strain DH5alpha Prophage TA90479 NZ_CP025520 488442..510148 0.006
Escherichia coli str. K-12 substr. MC4100 strain K-12 Prophage TA285017 NZ_HG738867 1519531..1552992 0.006