MGE detailed information
MGE type: Prophage MGE length: 36135 bp
Accession: NZ_CP092037 Location: 1454974..1491108 Organism: Escherichia coli strain MG1655-377GD Replicon: chromosome
Accession: NZ_CP092037 Location: 1454974..1491108 Organism: Escherichia coli strain MG1655-377GD Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MBA16_RS07165 (1449989) | 1449989..1450423 | + | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| MBA16_RS07170 (1450443) | 1450443..1450826 | + | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| MBA16_RS07175 (1450858) | 1450858..1451076 | + | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| MBA16_RS07180 (1451107) | 1451107..1452006 | - | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| MBA16_RS07185 (1452201) | 1452201..1453388 | + | 1188 | WP_001054204.1 | efflux MFS transporter YdeE | - |
| MBA16_RS07190 (1453515) | 1453515..1453610 | + | 96 | WP_000901367.1 | protein MgtS | - |
| MBA16_RS07195 (1453610) | 1453610..1453714 | + | 105 | WP_211180496.1 | protein MgtT | - |
| MBA16_RS07200 (1453829) | 1453829..1454719 | - | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| MBA16_RS07205 (1454974) | 1454974..1455366 | - | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| MBA16_RS07210 (1455642) | 1455642..1456160 | + | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| MBA16_RS07215 (1456204) | 1456204..1458249 | - | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| MBA16_RS07220 (1458386) | 1458386..1459132 | + | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| MBA16_RS07225 (1459221) | 1459221..1459907 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| MBA16_RS07230 (1460084) | 1460084..1460287 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| MBA16_RS07235 (1460322) | 1460322..1461782 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| MBA16_RS07240 (1461871) | 1461871..1463238 | - | 1368 | Protein_1408 | MHS family MFS transporter | - |
| MBA16_RS07245 (1463759) | 1463759..1463872 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| MBA16_RS07250 (1463941) | 1463941..1464174 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| MBA16_RS07255 (1464491) | 1464491..1465081 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| MBA16_RS07260 (1465179) | 1465179..1465754 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| MBA16_RS07265 (1465754) | 1465754..1466716 | - | 963 | WP_001027733.1 | phage tail protein | - |
| MBA16_RS07270 (1466667) | 1466667..1467236 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| MBA16_RS07275 (1467625) | 1467625..1467858 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| MBA16_RS07280 (1467916) | 1467916..1468326 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| MBA16_RS07285 (1468478) | 1468478..1468651 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| MBA16_RS07290 (1468823) | 1468823..1468978 | - | 156 | WP_001309517.1 | protein YnfN | - |
| MBA16_RS07295 (1469057) | 1469057..1469122 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| MBA16_RS07300 (1469125) | 1469125..1469313 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| MBA16_RS07305 (1469324) | 1469324..1469536 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| MBA16_RS07310 (1469899) | 1469899..1470396 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| MBA16_RS07315 (1470393) | 1470393..1470926 | - | 534 | WP_001092971.1 | lysozyme | - |
| MBA16_RS07320 (1470923) | 1470923..1471234 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| MBA16_RS07325 (1471239) | 1471239..1471454 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| MBA16_RS07330 (1471674) | 1471674..1471844 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| MBA16_RS07335 (1472208) | 1472208..1472423 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| MBA16_RS07340 (1472724) | 1472724..1472936 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| MBA16_RS07345 (1472991) | 1472991..1473080 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| MBA16_RS07350 (1473358) | 1473358..1474110 | - | 753 | WP_001047135.1 | antitermination protein | - |
| MBA16_RS07355 (1474124) | 1474124..1475173 | - | 1050 | WP_001393597.1 | DUF968 domain-containing protein | - |
| MBA16_RS07360 (1475175) | 1475175..1475453 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| MBA16_RS07365 (1475520) | 1475520..1475771 | - | 252 | WP_000980994.1 | protein Rem | - |
| MBA16_RS07370 (1475988) | 1475988..1476143 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| MBA16_RS07375 (1476215) | 1476215..1476502 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| MBA16_RS07380 (1476502) | 1476502..1476741 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| MBA16_RS07385 (1476766) | 1476766..1477071 | + | 306 | WP_001326990.1 | protein YdfV | - |
| MBA16_RS07390 (1477274) | 1477274..1477606 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| MBA16_RS07395 (1478043) | 1478043..1478192 | - | 150 | WP_011443592.1 | protein YdfW | - |
| MBA16_RS07400 (1478227) | 1478227..1478505 | - | 279 | Protein_1440 | hypothetical protein | - |
| MBA16_RS07405 (1478489) | 1478489..1478719 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| MBA16_RS07410 (1478803) | 1478803..1479210 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| MBA16_RS07415 (1479377) | 1479377..1479532 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| MBA16_RS21015 (1479534) | 1479534..1479662 | + | 129 | WP_000344964.1 | protein YdfB | - |
| MBA16_RS07420 (1479692) | 1479692..1479910 | + | 219 | WP_001171942.1 | protein YdfC | - |
| MBA16_RS07425 (1480478) | 1480478..1480666 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| MBA16_RS07430 (1480663) | 1480663..1480854 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| MBA16_RS07435 (1480947) | 1480947..1481714 | + | 768 | Protein_1448 | exonuclease | - |
| MBA16_RS07440 (1481711) | 1481711..1482406 | + | 696 | Protein_1449 | IS3 family transposase IS2 | Transposase |
| MBA16_RS07445 (1482420) | 1482420..1482506 | + | 87 | Protein_1450 | DUF3596 domain-containing protein | - |
| MBA16_RS07450 (1482550) | 1482550..1482849 | - | 300 | Protein_1451 | hypothetical protein | - |
| MBA16_RS07455 (1482814) | 1482814..1483389 | + | 576 | WP_238522725.1 | spermidine N1-acetyltransferase | - |
| MBA16_RS07460 (1483392) | 1483392..1484102 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| MBA16_RS07465 (1484210) | 1484210..1484515 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| MBA16_RS07470 (1484714) | 1484714..1487140 | + | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| MBA16_RS07475 (1487201) | 1487201..1489624 | + | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| MBA16_RS07480 (1489635) | 1489635..1490252 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| MBA16_RS07485 (1490254) | 1490254..1491108 | + | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| MBA16_RS07490 (1491151) | 1491151..1491765 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| MBA16_RS07495 (1491924) | 1491924..1493216 | + | 1293 | WP_071592181.1 | voltage-gated ClC-type chloride channel ClcB | - |
| MBA16_RS07500 (1493169) | 1493169..1493864 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| MBA16_RS07505 (1493989) | 1493989..1495209 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20067 | HG738867 | 1519531..1552992 | 0.008 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA1041 | NC_000913 | 1631002..1664463 | 0.008 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22686 | NC_010473 | 1718651..1753448 | 0.009 | |
| Escherichia coli BW2952 | Prophage | TA23854 | NC_012759 | 1521085..1554546 | 0.008 | |
| Escherichia coli BW25113 | Prophage | TA48683 | NZ_CP009273 | 1625259..1658720 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285017 | NZ_HG738867 | 1519531..1552992 | 0.008 |