MGE detailed information
MGE type: Genomic_island MGE length: 43228 bp
Accession: NZ_CP091423 Location: 1935442..1978669 Organism: Streptococcus suis strain LSM29 Replicon: chromosome
Accession: NZ_CP091423 Location: 1935442..1978669 Organism: Streptococcus suis strain LSM29 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L3X15_RS09495 (L3X15_09495) | 1931384..1934503 | + | 3120 | WP_237374696.1 | DUF6359 domain-containing protein | - |
| L3X15_RS09500 (L3X15_09500) | 1934583..1935449 | + | 867 | WP_012027852.1 | Hsp33 family molecular chaperone HslO | - |
| L3X15_RS09505 (L3X15_09505) | 1935442..1936446 | + | 1005 | WP_012775355.1 | tRNA dihydrouridine synthase DusB | - |
| L3X15_RS09510 (L3X15_09510) | 1936592..1937365 | - | 774 | WP_012027854.1 | NUDIX domain-containing protein | - |
| L3X15_RS09515 (L3X15_09515) | 1937358..1938179 | - | 822 | WP_012027855.1 | nicotinamide riboside transporter PnuC | - |
| L3X15_RS09520 (L3X15_09520) | 1938189..1939226 | - | 1038 | WP_012028524.1 | AAA family ATPase | - |
| L3X15_RS09525 (L3X15_09525) | 1939340..1941793 | - | 2454 | WP_014636516.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| L3X15_RS09530 (L3X15_09530) | 1941799..1942257 | - | 459 | WP_012027859.1 | CtsR family transcriptional regulator | - |
| L3X15_RS09535 (L3X15_09535) | 1942407..1942745 | + | 339 | WP_012027860.1 | thioredoxin domain-containing protein | - |
| L3X15_RS09540 (L3X15_09540) | 1942745..1943446 | + | 702 | WP_012027861.1 | hypothetical protein | - |
| L3X15_RS09545 (L3X15_09545) | 1943709..1944749 | - | 1041 | WP_012027862.1 | translation elongation factor Ts | - |
| L3X15_RS09550 (L3X15_09550) | 1944905..1945681 | - | 777 | WP_012775356.1 | 30S ribosomal protein S2 | - |
| L3X15_RS09555 (L3X15_09555) | 1946028..1946540 | - | 513 | WP_012775452.1 | adenylate kinase | - |
| L3X15_RS09565 (L3X15_09565) | 1947194..1952272 | - | 5079 | WP_012775357.1 | S8 family serine peptidase | - |
| L3X15_RS09570 (L3X15_09570) | 1952416..1952955 | - | 540 | WP_002940254.1 | transcription termination/antitermination protein NusG | - |
| L3X15_RS09575 (L3X15_09575) | 1953065..1953241 | - | 177 | WP_002940255.1 | preprotein translocase subunit SecE | - |
| L3X15_RS09580 (L3X15_09580) | 1953251..1953403 | - | 153 | WP_002940258.1 | 50S ribosomal protein L33 | - |
| L3X15_RS09585 (L3X15_09585) | 1953437..1955650 | - | 2214 | WP_012027868.1 | penicillin-binding protein PBP2A | - |
| L3X15_RS09590 (L3X15_09590) | 1955803..1956771 | + | 969 | WP_012027869.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| L3X15_RS09595 (L3X15_09595) | 1956773..1957639 | + | 867 | WP_012027870.1 | RluA family pseudouridine synthase | - |
| L3X15_RS09600 (L3X15_09600) | 1957666..1958478 | - | 813 | WP_002938438.1 | pur operon repressor | - |
| L3X15_RS09605 (L3X15_09605) | 1958580..1959446 | - | 867 | WP_012027872.1 | phosphotransferase | - |
| L3X15_RS09610 (L3X15_09610) | 1959446..1960387 | - | 942 | WP_012775359.1 | 3'-5' exoribonuclease YhaM family protein | - |
| L3X15_RS09615 (L3X15_09615) | 1960377..1961615 | - | 1239 | WP_012027874.1 | DNA recombination protein RmuC | - |
| L3X15_RS09620 (L3X15_09620) | 1961616..1962248 | - | 633 | WP_012027875.1 | thiamine diphosphokinase | - |
| L3X15_RS09625 (L3X15_09625) | 1962241..1962900 | - | 660 | WP_012027876.1 | Ribulose-phosphate 3-epimerase | VF |
| L3X15_RS09630 (L3X15_09630) | 1962915..1963790 | - | 876 | WP_012027877.1 | ribosome small subunit-dependent GTPase A | - |
| L3X15_RS09640 (L3X15_09640) | 1964687..1966264 | - | 1578 | WP_012027878.1 | ABC transporter ATP-binding protein | - |
| L3X15_RS09645 (L3X15_09645) | 1966261..1967502 | - | 1242 | WP_014636518.1 | radical SAM protein | - |
| L3X15_RS09650 (L3X15_09650) | 1967871..1968734 | - | 864 | WP_012027880.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| L3X15_RS09655 (L3X15_09655) | 1969224..1971668 | - | 2445 | WP_012027881.1 | alkaline phosphatase family protein | - |
| L3X15_RS09660 (L3X15_09660) | 1971681..1973411 | - | 1731 | WP_012775361.1 | membrane protein | - |
| L3X15_RS09665 (L3X15_09665) | 1973776..1974648 | - | 873 | WP_012775362.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| L3X15_RS09670 (L3X15_09670) | 1974668..1975198 | - | 531 | WP_009910909.1 | DUF1697 domain-containing protein | - |
| L3X15_RS09675 (L3X15_09675) | 1975212..1975469 | - | 258 | WP_012775363.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| L3X15_RS09680 (L3X15_09680) | 1975471..1975731 | - | 261 | WP_002939010.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| L3X15_RS09685 (L3X15_09685) | 1975807..1976262 | - | 456 | WP_012028534.1 | 8-oxo-dGTP diphosphatase | - |
| L3X15_RS09690 (L3X15_09690) | 1976269..1976598 | - | 330 | WP_012775364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| L3X15_RS09695 (L3X15_09695) | 1976588..1976875 | - | 288 | WP_012028535.1 | hypothetical protein | Antitoxin Detail |
| L3X15_RS09700 (L3X15_09700) | 1976973..1977341 | - | 369 | WP_012775453.1 | hypothetical protein | - |
| L3X15_RS09705 (L3X15_09705) | 1977334..1977903 | - | 570 | WP_012775366.1 | ribonuclease M5 | - |
| L3X15_RS09710 (L3X15_09710) | 1977887..1978669 | - | 783 | WP_012028536.1 | TatD family hydrolase | - |
| L3X15_RS09715 (L3X15_09715) | 1978776..1978913 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
| L3X15_RS09720 (L3X15_09720) | 1979081..1980076 | - | 996 | WP_012775367.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| L3X15_RS09725 (L3X15_09725) | 1980096..1980908 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
| L3X15_RS09730 (L3X15_09730) | 1980892..1981251 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
| L3X15_RS09735 (L3X15_09735) | 1981322..1982716 | - | 1395 | WP_012027899.1 | argininosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus suis SC84 | Genomic island | TA6281, TA10159 | NC_012924 | 1874993..1918220 | 0 | |
| Streptococcus suis strain ZY05719 isolate diseased pig | Genomic island | TA46538, TA46539 | NZ_CP007497 | 1873994..1917221 | 0 |