MGE detailed information
MGE type: Genomic_island MGE length: 43228 bp
Accession: NZ_CP091422 Location: 1848223..1891450 Organism: Streptococcus suis strain LSM157 Replicon: chromosome
Accession: NZ_CP091422 Location: 1848223..1891450 Organism: Streptococcus suis strain LSM157 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L3X06_RS09080 (L3X06_09080) | 1844165..1847284 | + | 3120 | WP_012775354.1 | DUF6359 domain-containing protein | - |
| L3X06_RS09085 (L3X06_09085) | 1847364..1848230 | + | 867 | WP_012027852.1 | Hsp33 family molecular chaperone HslO | - |
| L3X06_RS09090 (L3X06_09090) | 1848223..1849227 | + | 1005 | WP_012775355.1 | tRNA dihydrouridine synthase DusB | - |
| L3X06_RS09095 (L3X06_09095) | 1849373..1850146 | - | 774 | WP_012027854.1 | NUDIX domain-containing protein | - |
| L3X06_RS09100 (L3X06_09100) | 1850139..1850960 | - | 822 | WP_012027855.1 | nicotinamide riboside transporter PnuC | - |
| L3X06_RS09105 (L3X06_09105) | 1850970..1852007 | - | 1038 | WP_012028524.1 | AAA family ATPase | - |
| L3X06_RS09110 (L3X06_09110) | 1852121..1854574 | - | 2454 | WP_012027858.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| L3X06_RS09115 (L3X06_09115) | 1854580..1855038 | - | 459 | WP_012027859.1 | CtsR family transcriptional regulator | - |
| L3X06_RS09120 (L3X06_09120) | 1855188..1855526 | + | 339 | WP_012027860.1 | thioredoxin domain-containing protein | - |
| L3X06_RS09125 (L3X06_09125) | 1855526..1856227 | + | 702 | WP_012027861.1 | hypothetical protein | - |
| L3X06_RS09130 (L3X06_09130) | 1856490..1857530 | - | 1041 | WP_012027862.1 | translation elongation factor Ts | - |
| L3X06_RS09135 (L3X06_09135) | 1857686..1858462 | - | 777 | WP_012775356.1 | 30S ribosomal protein S2 | - |
| L3X06_RS09140 (L3X06_09140) | 1858809..1859321 | - | 513 | WP_012775452.1 | adenylate kinase | - |
| L3X06_RS09150 (L3X06_09150) | 1859975..1865053 | - | 5079 | WP_043028958.1 | S8 family serine peptidase | - |
| L3X06_RS09155 (L3X06_09155) | 1865197..1865736 | - | 540 | WP_002940254.1 | transcription termination/antitermination protein NusG | - |
| L3X06_RS09160 (L3X06_09160) | 1865846..1866022 | - | 177 | WP_002940255.1 | preprotein translocase subunit SecE | - |
| L3X06_RS09165 (L3X06_09165) | 1866032..1866184 | - | 153 | WP_002940258.1 | 50S ribosomal protein L33 | - |
| L3X06_RS09170 (L3X06_09170) | 1866218..1868431 | - | 2214 | WP_012027868.1 | penicillin-binding protein PBP2A | - |
| L3X06_RS09175 (L3X06_09175) | 1868584..1869552 | + | 969 | WP_012027869.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| L3X06_RS09180 (L3X06_09180) | 1869554..1870420 | + | 867 | WP_012027870.1 | RluA family pseudouridine synthase | - |
| L3X06_RS09185 (L3X06_09185) | 1870447..1871259 | - | 813 | WP_002938438.1 | pur operon repressor | - |
| L3X06_RS09190 (L3X06_09190) | 1871361..1872227 | - | 867 | WP_012027872.1 | phosphotransferase | - |
| L3X06_RS09195 (L3X06_09195) | 1872227..1873168 | - | 942 | WP_012775359.1 | 3'-5' exoribonuclease YhaM family protein | - |
| L3X06_RS09200 (L3X06_09200) | 1873158..1874396 | - | 1239 | WP_012027874.1 | DNA recombination protein RmuC | - |
| L3X06_RS09205 (L3X06_09205) | 1874397..1875029 | - | 633 | WP_012027875.1 | thiamine diphosphokinase | - |
| L3X06_RS09210 (L3X06_09210) | 1875022..1875681 | - | 660 | WP_012027876.1 | Ribulose-phosphate 3-epimerase | VF |
| L3X06_RS09215 (L3X06_09215) | 1875696..1876571 | - | 876 | WP_012027877.1 | ribosome small subunit-dependent GTPase A | - |
| L3X06_RS09225 (L3X06_09225) | 1877468..1879045 | - | 1578 | WP_043028959.1 | ABC transporter ATP-binding protein | - |
| L3X06_RS09230 (L3X06_09230) | 1879042..1880283 | - | 1242 | WP_014636518.1 | radical SAM protein | - |
| L3X06_RS09235 (L3X06_09235) | 1880652..1881515 | - | 864 | WP_012027880.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| L3X06_RS09240 (L3X06_09240) | 1882005..1884449 | - | 2445 | WP_012027881.1 | alkaline phosphatase family protein | - |
| L3X06_RS09245 (L3X06_09245) | 1884462..1886192 | - | 1731 | WP_012775361.1 | membrane protein | - |
| L3X06_RS09250 (L3X06_09250) | 1886557..1887429 | - | 873 | WP_012775362.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| L3X06_RS09255 (L3X06_09255) | 1887449..1887979 | - | 531 | WP_009910909.1 | DUF1697 domain-containing protein | - |
| L3X06_RS09260 (L3X06_09260) | 1887993..1888250 | - | 258 | WP_012775363.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| L3X06_RS09265 (L3X06_09265) | 1888252..1888512 | - | 261 | WP_002939010.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| L3X06_RS09270 (L3X06_09270) | 1888588..1889043 | - | 456 | WP_012028534.1 | 8-oxo-dGTP diphosphatase | - |
| L3X06_RS09275 (L3X06_09275) | 1889050..1889379 | - | 330 | WP_012775364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| L3X06_RS09280 (L3X06_09280) | 1889369..1889656 | - | 288 | WP_012028535.1 | hypothetical protein | Antitoxin Detail |
| L3X06_RS09285 (L3X06_09285) | 1889754..1890122 | - | 369 | WP_012775453.1 | hypothetical protein | - |
| L3X06_RS09290 (L3X06_09290) | 1890115..1890684 | - | 570 | WP_012775366.1 | ribonuclease M5 | - |
| L3X06_RS09295 (L3X06_09295) | 1890668..1891450 | - | 783 | WP_012028536.1 | TatD family hydrolase | - |
| L3X06_RS09300 (L3X06_09300) | 1891557..1891694 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
| L3X06_RS09305 (L3X06_09305) | 1891862..1892857 | - | 996 | WP_012775367.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| L3X06_RS09310 (L3X06_09310) | 1892877..1893689 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
| L3X06_RS09315 (L3X06_09315) | 1893673..1894032 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
| L3X06_RS09320 (L3X06_09320) | 1894103..1895497 | - | 1395 | WP_012027899.1 | argininosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus suis SC84 | Genomic island | TA6281, TA10159 | NC_012924 | 1874993..1918220 | 0 | |
| Streptococcus suis strain ZY05719 isolate diseased pig | Genomic island | TA46538, TA46539 | NZ_CP007497 | 1873994..1917221 | 0 |