MGE detailed information
MGE type: Prophage MGE length: 103949 bp
Accession: NZ_CP090508 Location: 433970..537918 Organism: Xylella fastidiosa subsp. morus strain Riv11 Replicon: chromosome
Accession: NZ_CP090508 Location: 433970..537918 Organism: Xylella fastidiosa subsp. morus strain Riv11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
LZ758_RS01765 (LZ758_01765) | 429794..430396 | + | 603 | WP_004086415.1 | riboflavin synthase | - |
LZ758_RS01770 (LZ758_01770) | 430393..431526 | + | 1134 | WP_038229930.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
LZ758_RS01775 (LZ758_01775) | 431557..432021 | + | 465 | WP_004086411.1 | 6,7-dimethyl-8-ribityllumazine synthase | - |
LZ758_RS01780 (LZ758_01780) | 432018..432491 | + | 474 | WP_004086409.1 | transcription antitermination factor NusB | - |
LZ758_RS01785 (LZ758_01785) | 432582..433556 | + | 975 | WP_012338057.1 | thiamine-phosphate kinase | - |
LZ758_RS01790 (LZ758_01790) | 433970..434269 | + | 300 | WP_027700515.1 | hypothetical protein | - |
LZ758_RS01795 (LZ758_01795) | 434266..434490 | + | 225 | WP_004086512.1 | hypothetical protein | - |
LZ758_RS01800 (LZ758_01800) | 434876..436259 | - | 1384 | Protein_340 | PhoH family protein | - |
LZ758_RS01805 (LZ758_01805) | 436324..436803 | - | 480 | WP_004089690.1 | peroxiredoxin | - |
LZ758_RS01810 (LZ758_01810) | 436850..437425 | - | 576 | WP_011098233.1 | glycine cleavage system protein R | - |
LZ758_RS01815 (LZ758_01815) | 437578..438486 | + | 909 | WP_004089694.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
LZ758_RS01820 (LZ758_01820) | 438506..439012 | + | 507 | WP_004089696.1 | hypothetical protein | - |
LZ758_RS01825 (LZ758_01825) | 439470..440057 | - | 588 | WP_011098232.1 | Tfp pilus assembly protein FimT/FimU | - |
LZ758_RS01830 (LZ758_01830) | 440212..442221 | + | 2010 | WP_038229932.1 | excinuclease ABC subunit UvrB | - |
LZ758_RS01840 (LZ758_01840) | 442351..442995 | - | 645 | WP_230577731.1 | tyrosine-type recombinase/integrase | - |
LZ758_RS01845 (LZ758_01845) | 443403..443723 | - | 321 | WP_038229933.1 | helix-turn-helix domain-containing protein | - |
LZ758_RS01850 (LZ758_01850) | 443782..444228 | - | 447 | WP_038229935.1 | single-stranded DNA-binding protein | - |
LZ758_RS01855 (LZ758_01855) | 444295..444885 | - | 591 | WP_038229937.1 | Bro-N domain-containing protein | - |
LZ758_RS01860 (LZ758_01860) | 445239..446882 | - | 1644 | WP_038229938.1 | YqaJ viral recombinase family protein | - |
LZ758_RS01865 (LZ758_01865) | 446879..447814 | - | 936 | WP_038229940.1 | phage recombination protein Bet | - |
LZ758_RS01870 (LZ758_01870) | 447830..448651 | - | 822 | WP_027700618.1 | DUF2303 family protein | - |
LZ758_RS01875 (LZ758_01875) | 448691..449035 | - | 345 | WP_038229942.1 | hypothetical protein | - |
LZ758_RS01880 (LZ758_01880) | 449056..449247 | - | 192 | WP_038229961.1 | hypothetical protein | - |
LZ758_RS01885 (LZ758_01885) | 449366..449761 | - | 396 | WP_230577623.1 | hypothetical protein | - |
LZ758_RS01890 (LZ758_01890) | 449934..450125 | - | 192 | WP_004086365.1 | hypothetical protein | - |
LZ758_RS01895 (LZ758_01895) | 450122..450562 | - | 441 | WP_230577622.1 | hypothetical protein | - |
LZ758_RS01900 (LZ758_01900) | 450823..451224 | - | 402 | WP_230577621.1 | hypothetical protein | - |
LZ758_RS01905 (LZ758_01905) | 451413..451781 | - | 369 | WP_020852210.1 | DUF86 domain-containing protein | - |
LZ758_RS01910 (LZ758_01910) | 451778..452068 | - | 291 | WP_004086345.1 | nucleotidyltransferase | - |
LZ758_RS01915 (LZ758_01915) | 452091..452588 | - | 498 | WP_230577620.1 | hypothetical protein | - |
LZ758_RS01920 (LZ758_01920) | 452667..453431 | - | 765 | WP_051248012.1 | XRE family transcriptional regulator | - |
LZ758_RS01925 (LZ758_01925) | 453536..454051 | - | 516 | WP_234056373.1 | hypothetical protein | - |
LZ758_RS01930 (LZ758_01930) | 454074..454220 | + | 147 | WP_155238084.1 | hypothetical protein | - |
LZ758_RS01935 (LZ758_01935) | 454281..454469 | + | 189 | WP_020851634.1 | hypothetical protein | - |
LZ758_RS01940 (LZ758_01940) | 454499..454714 | + | 216 | WP_230577619.1 | hypothetical protein | - |
LZ758_RS01945 (LZ758_01945) | 454711..455076 | + | 366 | WP_038229950.1 | hypothetical protein | - |
LZ758_RS01950 (LZ758_01950) | 455334..455936 | + | 603 | WP_080703220.1 | Bro-N domain-containing protein | - |
LZ758_RS01955 (LZ758_01955) | 455933..456721 | + | 789 | WP_040123280.1 | Bro-N domain-containing protein | - |
LZ758_RS01960 (LZ758_01960) | 456751..457860 | + | 1110 | WP_040123381.1 | Bro-N domain-containing protein | - |
LZ758_RS01965 (LZ758_01965) | 457857..458744 | + | 888 | WP_038229974.1 | YdaU family protein | - |
LZ758_RS01970 (LZ758_01970) | 458725..459414 | + | 690 | WP_038229976.1 | hypothetical protein | - |
LZ758_RS01975 (LZ758_01975) | 459411..459872 | + | 462 | WP_234056374.1 | hypothetical protein | - |
LZ758_RS01980 (LZ758_01980) | 460001..460699 | + | 699 | WP_234056375.1 | hypothetical protein | - |
LZ758_RS01985 (LZ758_01985) | 460728..461129 | - | 402 | WP_051606226.1 | Arc family DNA-binding protein | - |
LZ758_RS01990 (LZ758_01990) | 461231..461395 | + | 165 | WP_080703205.1 | Arc family DNA-binding protein | - |
LZ758_RS01995 (LZ758_01995) | 461475..462311 | + | 837 | WP_201800394.1 | phage antirepressor N-terminal domain-containing protein | - |
LZ758_RS02000 (LZ758_02000) | 462490..462990 | + | 501 | WP_038230262.1 | lysozyme | - |
LZ758_RS02005 (LZ758_02005) | 462983..463312 | + | 330 | WP_173391721.1 | phage holin family protein | - |
LZ758_RS02010 (LZ758_02010) | 463302..463763 | + | 462 | WP_040123255.1 | hypothetical protein | - |
LZ758_RS02015 (LZ758_02015) | 463765..463977 | + | 213 | WP_040123254.1 | hypothetical protein | - |
LZ758_RS02020 (LZ758_02020) | 464068..464466 | + | 399 | WP_020853032.1 | hypothetical protein | - |
LZ758_RS02025 (LZ758_02025) | 464417..465967 | + | 1551 | WP_038230550.1 | phage terminase large subunit | - |
LZ758_RS02030 (LZ758_02030) | 465964..466209 | + | 246 | WP_014607757.1 | hypothetical protein | - |
LZ758_RS02035 (LZ758_02035) | 466436..467458 | + | 1023 | WP_230577605.1 | Prophage integrase IntA ; Integrase | Integrase |
LZ758_RS12170 | 467513..467644 | + | 132 | WP_267959508.1 | hypothetical protein | - |
LZ758_RS02040 (LZ758_02040) | 467778..468938 | + | 1161 | WP_234056376.1 | DUF1073 domain-containing protein | - |
LZ758_RS02045 (LZ758_02045) | 468987..469268 | - | 282 | WP_004090283.1 | helix-turn-helix domain-containing protein | - |
LZ758_RS02050 (LZ758_02050) | 469265..469603 | - | 339 | WP_038230273.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
LZ758_RS02055 (LZ758_02055) | 469676..470521 | + | 846 | WP_040123253.1 | phage head morphogenesis protein | - |
LZ758_RS02060 (LZ758_02060) | 470521..471729 | + | 1209 | WP_038230281.1 | DUF2213 domain-containing protein | - |
LZ758_RS02065 (LZ758_02065) | 471739..472044 | + | 306 | WP_234509093.1 | hypothetical protein | - |
LZ758_RS02070 (LZ758_02070) | 472020..472220 | + | 201 | WP_234509095.1 | hypothetical protein | - |
LZ758_RS02075 (LZ758_02075) | 472230..473213 | + | 984 | WP_038230284.1 | DUF2184 domain-containing protein | - |
LZ758_RS02080 (LZ758_02080) | 473278..473613 | + | 336 | WP_038230286.1 | hypothetical protein | - |
LZ758_RS02085 (LZ758_02085) | 473616..473987 | + | 372 | WP_004085010.1 | DUF4054 domain-containing protein | - |
LZ758_RS02090 (LZ758_02090) | 473984..474463 | + | 480 | WP_027700647.1 | hypothetical protein | - |
LZ758_RS02095 (LZ758_02095) | 474450..474818 | + | 369 | WP_021358622.1 | hypothetical protein | - |
LZ758_RS12175 | 474840..474962 | - | 123 | WP_267964463.1 | hypothetical protein | - |
LZ758_RS02100 (LZ758_02100) | 475077..475274 | + | 198 | WP_234509097.1 | hypothetical protein | - |
LZ758_RS12180 | 475275..476192 | + | 918 | WP_267964464.1 | DUF3383 family protein | - |
LZ758_RS12185 | 476159..476769 | + | 611 | Protein_403 | DUF3383 family protein | - |
LZ758_RS02110 (LZ758_02110) | 476779..477216 | + | 438 | WP_038230291.1 | DUF3277 family protein | - |
LZ758_RS02115 (LZ758_02115) | 477213..477635 | + | 423 | WP_004085005.1 | putative phage tail assembly chaperone | - |
LZ758_RS02120 (LZ758_02120) | 477783..479672 | + | 1890 | WP_038230294.1 | hypothetical protein | - |
LZ758_RS02125 (LZ758_02125) | 479746..480054 | - | 309 | WP_004085003.1 | putative addiction module antidote protein | Antitoxin Detail |
LZ758_RS02130 (LZ758_02130) | 480058..480357 | - | 300 | WP_024749166.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
LZ758_RS02135 (LZ758_02135) | 480445..480750 | + | 306 | WP_230577600.1 | hypothetical protein | - |
LZ758_RS02140 (LZ758_02140) | 480766..481215 | + | 450 | WP_230577599.1 | hypothetical protein | - |
LZ758_RS02145 (LZ758_02145) | 481215..481532 | + | 318 | WP_012382585.1 | hypothetical protein | - |
LZ758_RS02150 (LZ758_02150) | 481529..482359 | + | 831 | WP_234056377.1 | hypothetical protein | - |
LZ758_RS02155 (LZ758_02155) | 482356..482997 | + | 642 | WP_040123250.1 | Gp138 family membrane-puncturing spike protein | - |
LZ758_RS02160 (LZ758_02160) | 482994..483347 | + | 354 | WP_040123277.1 | hypothetical protein | - |
LZ758_RS02165 (LZ758_02165) | 483403..483696 | - | 294 | WP_004085592.1 | putative addiction module antidote protein | Antitoxin Detail |
LZ758_RS02170 (LZ758_02170) | 483699..483995 | - | 297 | WP_004085590.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
LZ758_RS02175 (LZ758_02175) | 484098..485243 | + | 1146 | WP_038211620.1 | baseplate J/gp47 family protein | - |
LZ758_RS02180 (LZ758_02180) | 485240..485800 | + | 561 | WP_234056378.1 | DUF2612 domain-containing protein | - |
LZ758_RS02185 (LZ758_02185) | 485804..486967 | + | 1164 | WP_234056379.1 | tail fiber protein | - |
LZ758_RS02190 (LZ758_02190) | 487214..487867 | + | 654 | WP_234056380.1 | hypothetical protein | - |
LZ758_RS02195 (LZ758_02195) | 487864..489069 | + | 1206 | WP_038211240.1 | XRE family transcriptional regulator | - |
LZ758_RS02200 (LZ758_02200) | 489784..490581 | + | 798 | WP_234056381.1 | serine protease | - |
LZ758_RS02205 (LZ758_02205) | 491073..491372 | + | 300 | WP_234056382.1 | DNA-binding transcriptional regulator | - |
LZ758_RS02210 (LZ758_02210) | 491636..492538 | - | 903 | WP_230577614.1 | hypothetical protein ; Integrase | Integrase |
LZ758_RS02215 (LZ758_02215) | 492583..492906 | - | 324 | WP_051606225.1 | helix-turn-helix domain-containing protein | - |
LZ758_RS02220 (LZ758_02220) | 492893..493042 | - | 150 | WP_196242981.1 | hypothetical protein | - |
LZ758_RS02225 (LZ758_02225) | 493039..494457 | - | 1419 | WP_234056383.1 | DEAD/DEAH box helicase | - |
LZ758_RS02230 (LZ758_02230) | 494542..494988 | + | 447 | WP_234056384.1 | hypothetical protein | - |
LZ758_RS02235 (LZ758_02235) | 494990..495268 | - | 279 | WP_234056385.1 | VRR-NUC domain-containing protein | - |
LZ758_RS02240 (LZ758_02240) | 495265..497445 | - | 2181 | WP_234056386.1 | DNA polymerase | - |
LZ758_RS02245 (LZ758_02245) | 497447..498604 | - | 1158 | WP_234056261.1 | BRO family protein | - |
LZ758_RS02250 (LZ758_02250) | 498729..499295 | - | 567 | WP_234056387.1 | DUF2815 family protein | - |
LZ758_RS02255 (LZ758_02255) | 499292..500572 | - | 1281 | WP_234056388.1 | DUF2800 domain-containing protein | - |
LZ758_RS02260 (LZ758_02260) | 500569..501000 | - | 432 | WP_234056258.1 | hypothetical protein | - |
LZ758_RS02265 (LZ758_02265) | 501057..501251 | - | 195 | WP_016024078.1 | hypothetical protein | - |
LZ758_RS02270 (LZ758_02270) | 501283..501474 | - | 192 | WP_040123260.1 | hypothetical protein | - |
LZ758_RS02275 (LZ758_02275) | 501498..501689 | - | 192 | WP_004087232.1 | hypothetical protein | - |
LZ758_RS02280 (LZ758_02280) | 501686..502093 | - | 408 | WP_038230230.1 | hypothetical protein | - |
LZ758_RS02285 (LZ758_02285) | 502090..502560 | - | 471 | WP_038230232.1 | DUF1566 domain-containing protein | - |
LZ758_RS02290 (LZ758_02290) | 502557..502982 | - | 426 | WP_038230234.1 | hypothetical protein | - |
LZ758_RS02295 (LZ758_02295) | 502979..503500 | - | 522 | WP_230577609.1 | hypothetical protein | - |
LZ758_RS02300 (LZ758_02300) | 503814..504002 | + | 189 | WP_004087046.1 | antitoxin VbhA family protein | Antitoxin Detail |
LZ758_RS02305 (LZ758_02305) | 503999..504502 | + | 504 | WP_230577608.1 | Fic/DOC family protein | Toxin Detail |
LZ758_RS02310 (LZ758_02310) | 504661..505335 | - | 675 | WP_038230238.1 | helix-turn-helix transcriptional regulator | - |
LZ758_RS12190 | 505538..505666 | + | 129 | WP_267964465.1 | hypothetical protein | - |
LZ758_RS02315 (LZ758_02315) | 505656..506153 | + | 498 | WP_234056389.1 | hypothetical protein | - |
LZ758_RS02320 (LZ758_02320) | 506214..506402 | + | 189 | WP_038230241.1 | hypothetical protein | - |
LZ758_RS02325 (LZ758_02325) | 506432..506647 | + | 216 | WP_230577607.1 | hypothetical protein | - |
LZ758_RS02330 (LZ758_02330) | 506665..506886 | + | 222 | WP_234056390.1 | hypothetical protein | - |
LZ758_RS02335 (LZ758_02335) | 506931..507512 | + | 582 | WP_038230245.1 | Bro-N domain-containing protein | - |
LZ758_RS02340 (LZ758_02340) | 507578..508687 | + | 1110 | WP_040123376.1 | Bro-N domain-containing protein | - |
LZ758_RS02345 (LZ758_02345) | 508684..508944 | + | 261 | WP_230577606.1 | hypothetical protein | - |
LZ758_RS02350 (LZ758_02350) | 508946..509794 | + | 849 | WP_040123257.1 | hypothetical protein | - |
LZ758_RS02355 (LZ758_02355) | 509791..511251 | + | 1461 | WP_038230254.1 | replicative DNA helicase | - |
LZ758_RS02360 (LZ758_02360) | 511257..511667 | + | 411 | WP_038228391.1 | hypothetical protein | - |
LZ758_RS02365 (LZ758_02365) | 511796..512494 | + | 699 | WP_234056391.1 | hypothetical protein | - |
LZ758_RS02370 (LZ758_02370) | 512683..512949 | + | 267 | WP_004089577.1 | BrnT family toxin | - |
LZ758_RS02375 (LZ758_02375) | 512936..513274 | + | 339 | WP_004089578.1 | BrnA antitoxin family protein | - |
LZ758_RS02380 (LZ758_02380) | 513477..513977 | + | 501 | WP_038230262.1 | lysozyme | - |
LZ758_RS02385 (LZ758_02385) | 513970..514299 | + | 330 | WP_173391721.1 | phage holin family protein | - |
LZ758_RS02390 (LZ758_02390) | 514289..514750 | + | 462 | WP_040123255.1 | hypothetical protein | - |
LZ758_RS02395 (LZ758_02395) | 514752..514964 | + | 213 | WP_040123254.1 | hypothetical protein | - |
LZ758_RS02400 (LZ758_02400) | 515055..515453 | + | 399 | WP_020853032.1 | hypothetical protein | - |
LZ758_RS02405 (LZ758_02405) | 515404..516636 | + | 1233 | WP_234509100.1 | hypothetical protein | - |
LZ758_RS02410 (LZ758_02410) | 516633..516953 | + | 321 | WP_234509102.1 | phage terminase large subunit | - |
LZ758_RS02415 (LZ758_02415) | 516950..517195 | + | 246 | WP_014607757.1 | hypothetical protein | - |
LZ758_RS02420 (LZ758_02420) | 517422..518444 | + | 1023 | WP_230577605.1 | Prophage integrase IntA ; Integrase | Integrase |
LZ758_RS12195 | 518499..518630 | + | 132 | WP_267959508.1 | hypothetical protein | - |
LZ758_RS02425 (LZ758_02425) | 518764..519924 | + | 1161 | WP_234056376.1 | DUF1073 domain-containing protein | - |
LZ758_RS02430 (LZ758_02430) | 519973..520254 | - | 282 | WP_004090283.1 | helix-turn-helix domain-containing protein | - |
LZ758_RS02435 (LZ758_02435) | 520251..520589 | - | 339 | WP_038230273.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
LZ758_RS02440 (LZ758_02440) | 520662..521489 | + | 828 | WP_234509104.1 | phage minor head protein | - |
LZ758_RS02445 (LZ758_02445) | 521506..522714 | + | 1209 | WP_038230281.1 | DUF2213 domain-containing protein | - |
LZ758_RS02450 (LZ758_02450) | 522724..523206 | + | 483 | WP_038230283.1 | hypothetical protein | - |
LZ758_RS02455 (LZ758_02455) | 523216..524199 | + | 984 | WP_038230284.1 | DUF2184 domain-containing protein | - |
LZ758_RS02460 (LZ758_02460) | 524264..524599 | + | 336 | WP_038230286.1 | hypothetical protein | - |
LZ758_RS02465 (LZ758_02465) | 524602..524973 | + | 372 | WP_004085010.1 | DUF4054 domain-containing protein | - |
LZ758_RS02470 (LZ758_02470) | 524970..525449 | + | 480 | WP_027700647.1 | hypothetical protein | - |
LZ758_RS02475 (LZ758_02475) | 525436..525804 | + | 369 | WP_021358622.1 | hypothetical protein | - |
LZ758_RS02480 (LZ758_02480) | 525857..526261 | + | 405 | WP_230577601.1 | hypothetical protein | - |
LZ758_RS02485 (LZ758_02485) | 526399..527757 | + | 1359 | WP_234509106.1 | DUF3383 domain-containing protein | - |
LZ758_RS02490 (LZ758_02490) | 527767..528204 | + | 438 | WP_038230291.1 | DUF3277 family protein | - |
LZ758_RS02495 (LZ758_02495) | 528201..528623 | + | 423 | WP_004085005.1 | putative phage tail assembly chaperone | - |
LZ758_RS02500 (LZ758_02500) | 528771..530660 | + | 1890 | WP_038230294.1 | hypothetical protein | - |
LZ758_RS02505 (LZ758_02505) | 530734..531042 | - | 309 | WP_004085003.1 | putative addiction module antidote protein | Antitoxin Detail |
LZ758_RS02510 (LZ758_02510) | 531046..531345 | - | 300 | WP_024749166.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
LZ758_RS02515 (LZ758_02515) | 531433..531738 | + | 306 | WP_230577600.1 | hypothetical protein | - |
LZ758_RS02520 (LZ758_02520) | 531882..532202 | + | 321 | WP_234509108.1 | hypothetical protein | - |
LZ758_RS02525 (LZ758_02525) | 532202..532519 | + | 318 | WP_012382585.1 | hypothetical protein | - |
LZ758_RS02530 (LZ758_02530) | 532516..533346 | + | 831 | WP_234056377.1 | hypothetical protein | - |
LZ758_RS02535 (LZ758_02535) | 533343..533984 | + | 642 | WP_040123250.1 | Gp138 family membrane-puncturing spike protein | - |
LZ758_RS02540 (LZ758_02540) | 533981..534334 | + | 354 | WP_234056392.1 | hypothetical protein | - |
LZ758_RS02545 (LZ758_02545) | 534345..534650 | - | 306 | WP_038211623.1 | putative addiction module antidote protein | Antitoxin Detail |
LZ758_RS02550 (LZ758_02550) | 534654..534950 | - | 297 | WP_004089252.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
LZ758_RS02555 (LZ758_02555) | 535049..536194 | + | 1146 | WP_038211620.1 | baseplate J/gp47 family protein | - |
LZ758_RS02560 (LZ758_02560) | 536191..536751 | + | 561 | WP_011097869.1 | DUF2612 domain-containing protein | - |
LZ758_RS02565 (LZ758_02565) | 536755..537918 | + | 1164 | WP_040123248.1 | tail fiber protein | - |
LZ758_RS02570 (LZ758_02570) | 538215..538367 | + | 153 | WP_162531331.1 | hypothetical protein | - |
LZ758_RS02575 (LZ758_02575) | 539575..540048 | - | 474 | WP_004089938.1 | 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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