MGE detailed information
MGE type: Genomic_island MGE length: 43228 bp
Accession: NZ_CP085088 Location: 1744538..1787765 Organism: Streptococcus suis strain Ssuis_MA1 Replicon: chromosome
Accession: NZ_CP085088 Location: 1744538..1787765 Organism: Streptococcus suis strain Ssuis_MA1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LIO33_RS08575 | 1740480..1743599 | + | 3120 | WP_012775354.1 | DUF6359 domain-containing protein | - |
| LIO33_RS08580 | 1743679..1744545 | + | 867 | WP_012027852.1 | Hsp33 family molecular chaperone HslO | - |
| LIO33_RS08585 | 1744538..1745542 | + | 1005 | WP_012775355.1 | tRNA dihydrouridine synthase DusB | - |
| LIO33_RS08590 | 1745688..1746461 | - | 774 | WP_012027854.1 | NUDIX domain-containing protein | - |
| LIO33_RS08595 | 1746454..1747275 | - | 822 | WP_012027855.1 | nicotinamide riboside transporter PnuC | - |
| LIO33_RS08600 | 1747285..1748322 | - | 1038 | WP_012028524.1 | AAA family ATPase | - |
| LIO33_RS08605 | 1748436..1750889 | - | 2454 | WP_012027858.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| LIO33_RS08610 | 1750895..1751353 | - | 459 | WP_012027859.1 | CtsR family transcriptional regulator | - |
| LIO33_RS08615 | 1751503..1751841 | + | 339 | WP_012027860.1 | thioredoxin domain-containing protein | - |
| LIO33_RS08620 | 1751841..1752542 | + | 702 | WP_012027861.1 | hypothetical protein | - |
| LIO33_RS08625 | 1752805..1753845 | - | 1041 | WP_012027862.1 | translation elongation factor Ts | - |
| LIO33_RS08630 | 1754001..1754777 | - | 777 | WP_012775356.1 | 30S ribosomal protein S2 | - |
| LIO33_RS08635 | 1755124..1755636 | - | 513 | WP_012775452.1 | adenylate kinase | - |
| LIO33_RS08645 | 1756290..1761368 | - | 5079 | WP_012775357.1 | S8 family serine peptidase | - |
| LIO33_RS08650 | 1761512..1762051 | - | 540 | WP_002940254.1 | transcription termination/antitermination protein NusG | - |
| LIO33_RS08655 | 1762161..1762337 | - | 177 | WP_002940255.1 | preprotein translocase subunit SecE | - |
| LIO33_RS08660 | 1762347..1762499 | - | 153 | WP_002940258.1 | 50S ribosomal protein L33 | - |
| LIO33_RS08665 | 1762533..1764746 | - | 2214 | WP_012027868.1 | penicillin-binding protein PBP2A | - |
| LIO33_RS08670 | 1764899..1765867 | + | 969 | WP_012027869.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| LIO33_RS08675 | 1765869..1766735 | + | 867 | WP_012027870.1 | RluA family pseudouridine synthase | - |
| LIO33_RS08680 | 1766762..1767574 | - | 813 | WP_002938438.1 | pur operon repressor | - |
| LIO33_RS08685 | 1767676..1768542 | - | 867 | WP_012027872.1 | phosphotransferase | - |
| LIO33_RS08690 | 1768542..1769483 | - | 942 | WP_012775359.1 | 3'-5' exoribonuclease YhaM family protein | - |
| LIO33_RS08695 | 1769473..1770711 | - | 1239 | WP_012027874.1 | DNA recombination protein RmuC | - |
| LIO33_RS08700 | 1770712..1771344 | - | 633 | WP_012027875.1 | thiamine diphosphokinase | - |
| LIO33_RS08705 | 1771337..1771996 | - | 660 | WP_012027876.1 | Ribulose-phosphate 3-epimerase | VF |
| LIO33_RS08710 | 1772011..1772886 | - | 876 | WP_012027877.1 | ribosome small subunit-dependent GTPase A | - |
| LIO33_RS08720 | 1773783..1775360 | - | 1578 | WP_012027878.1 | ABC transporter ATP-binding protein | - |
| LIO33_RS08725 | 1775357..1776598 | - | 1242 | WP_014636518.1 | radical SAM protein | - |
| LIO33_RS08730 | 1776967..1777830 | - | 864 | WP_012027880.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| LIO33_RS08735 | 1778320..1780764 | - | 2445 | WP_012027881.1 | alkaline phosphatase family protein | - |
| LIO33_RS08740 | 1780777..1782507 | - | 1731 | WP_012775361.1 | membrane protein | - |
| LIO33_RS08745 | 1782872..1783744 | - | 873 | WP_012775362.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| LIO33_RS08750 | 1783764..1784294 | - | 531 | WP_009910909.1 | DUF1697 domain-containing protein | - |
| LIO33_RS08755 | 1784308..1784565 | - | 258 | WP_012775363.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| LIO33_RS08760 | 1784567..1784827 | - | 261 | WP_002939010.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LIO33_RS08765 | 1784903..1785358 | - | 456 | WP_012028534.1 | 8-oxo-dGTP diphosphatase | - |
| LIO33_RS08770 | 1785365..1785694 | - | 330 | WP_012775364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LIO33_RS08775 | 1785684..1785971 | - | 288 | WP_012028535.1 | hypothetical protein | Antitoxin Detail |
| LIO33_RS08780 | 1786069..1786437 | - | 369 | WP_012775453.1 | hypothetical protein | - |
| LIO33_RS08785 | 1786430..1786999 | - | 570 | WP_012775366.1 | ribonuclease M5 | - |
| LIO33_RS08790 | 1786983..1787765 | - | 783 | WP_012028536.1 | TatD family hydrolase | - |
| LIO33_RS08795 | 1787872..1788009 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
| LIO33_RS08800 | 1788177..1789172 | - | 996 | WP_012775367.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| LIO33_RS08805 | 1789192..1790004 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
| LIO33_RS08810 | 1789988..1790347 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
| LIO33_RS08815 | 1790418..1791812 | - | 1395 | WP_012027899.1 | argininosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus suis SC84 | Genomic island | TA6281, TA10159 | NC_012924 | 1874993..1918220 | 0 | |
| Streptococcus suis strain ZY05719 isolate diseased pig | Genomic island | TA46538, TA46539 | NZ_CP007497 | 1873994..1917221 | 0 |