MGE detailed information
MGE type: Genomic_island MGE length: 8321 bp
Accession: NZ_CP085063 Location: 2507111..2515431 Organism: Escherichia coli strain P31_YH1_02.21 Replicon: chromosome
Accession: NZ_CP085063 Location: 2507111..2515431 Organism: Escherichia coli strain P31_YH1_02.21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LH370_RS12165 (2503642) | 2503642..2504367 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| LH370_RS12170 (2504404) | 2504404..2504943 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| LH370_RS12175 (2505008) | 2505008..2505556 | - | 549 | WP_000695557.1 | type 1 fimbrial major subunit FimA | - |
| LH370_RS12180 (2506037) | 2506037..2506633 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| LH370_RS12185 (2507111) | 2507111..2507713 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| LH370_RS12190 (2509169) | 2509169..2509885 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| LH370_RS12195 (2509905) | 2509905..2511011 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| LH370_RS12200 (2511076) | 2511076..2512056 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| LH370_RS12205 (2512166) | 2512166..2512371 | + | 206 | Protein_2387 | HNH endonuclease | - |
| LH370_RS12210 (2512639) | 2512639..2513879 | - | 1241 | Protein_2388 | helicase YjhR | - |
| LH370_RS12215 (2513995) | 2513995..2514126 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| LH370_RS12220 (2514617) | 2514617..2514874 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| LH370_RS12225 (2514886) | 2514886..2515431 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| LH370_RS12230 (2515487) | 2515487..2516233 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| LH370_RS12235 (2516402) | 2516402..2516620 | + | 219 | Protein_2393 | hypothetical protein | - |
| LH370_RS12240 (2516658) | 2516658..2516774 | + | 117 | Protein_2394 | VOC family protein | - |
| LH370_RS12245 (2517019) | 2517019..2518140 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| LH370_RS12250 (2518137) | 2518137..2518415 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| LH370_RS12255 (2518427) | 2518427..2519740 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6279 | NC_000913 | 4533239..4545029 | 0.01 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21460 | NC_007779 | 4537919..4549709 | 0.01 | |
| Escherichia coli BW25113 | Genomic island | TA48705 | NZ_CP009273 | 4523056..4534846 | 0.01 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68445 | NZ_CP017979 | 4432698..4444488 | 0.01 |