MGE detailed information
MGE type: Genomic_island MGE length: 43228 bp
Accession: NZ_CP082948 Location: 1916543..1959770 Organism: Streptococcus suis strain SZ1908 Replicon: chromosome
Accession: NZ_CP082948 Location: 1916543..1959770 Organism: Streptococcus suis strain SZ1908 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8227_RS09390 (K8227_09365) | 1912485..1915604 | + | 3120 | WP_223375653.1 | DUF6359 domain-containing protein | - |
| K8227_RS09395 (K8227_09370) | 1915684..1916550 | + | 867 | WP_012027852.1 | Hsp33 family molecular chaperone HslO | - |
| K8227_RS09400 (K8227_09375) | 1916543..1917547 | + | 1005 | WP_012775355.1 | tRNA dihydrouridine synthase DusB | - |
| K8227_RS09405 (K8227_09380) | 1917693..1918466 | - | 774 | WP_012027854.1 | NUDIX domain-containing protein | - |
| K8227_RS09410 (K8227_09385) | 1918459..1919280 | - | 822 | WP_012027855.1 | nicotinamide riboside transporter PnuC | - |
| K8227_RS09415 (K8227_09390) | 1919290..1920327 | - | 1038 | WP_012028524.1 | AAA family ATPase | - |
| K8227_RS09420 (K8227_09395) | 1920441..1922894 | - | 2454 | WP_014636516.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| K8227_RS09425 (K8227_09400) | 1922900..1923358 | - | 459 | WP_012027859.1 | CtsR family transcriptional regulator | - |
| K8227_RS09430 (K8227_09405) | 1923508..1923846 | + | 339 | WP_012027860.1 | thioredoxin domain-containing protein | - |
| K8227_RS09435 (K8227_09410) | 1923846..1924547 | + | 702 | WP_012027861.1 | hypothetical protein | - |
| K8227_RS09440 (K8227_09415) | 1924810..1925850 | - | 1041 | WP_012027862.1 | translation elongation factor Ts | - |
| K8227_RS09445 (K8227_09420) | 1926006..1926782 | - | 777 | WP_012775356.1 | 30S ribosomal protein S2 | - |
| K8227_RS09450 (K8227_09425) | 1927129..1927641 | - | 513 | WP_012775452.1 | adenylate kinase | - |
| K8227_RS09460 (K8227_09435) | 1928295..1933373 | - | 5079 | WP_223375654.1 | S8 family serine peptidase | - |
| K8227_RS09465 (K8227_09440) | 1933517..1934056 | - | 540 | WP_002940254.1 | transcription termination/antitermination protein NusG | - |
| K8227_RS09470 (K8227_09445) | 1934166..1934342 | - | 177 | WP_002940255.1 | preprotein translocase subunit SecE | - |
| K8227_RS09475 (K8227_09450) | 1934352..1934504 | - | 153 | WP_002940258.1 | 50S ribosomal protein L33 | - |
| K8227_RS09480 (K8227_09455) | 1934538..1936751 | - | 2214 | WP_012027868.1 | penicillin-binding protein PBP2A | - |
| K8227_RS09485 (K8227_09460) | 1936904..1937872 | + | 969 | WP_012027869.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| K8227_RS09490 (K8227_09465) | 1937874..1938740 | + | 867 | WP_012027870.1 | RluA family pseudouridine synthase | - |
| K8227_RS09495 (K8227_09470) | 1938767..1939579 | - | 813 | WP_002938438.1 | pur operon repressor | - |
| K8227_RS09500 (K8227_09475) | 1939681..1940547 | - | 867 | WP_012027872.1 | phosphotransferase | - |
| K8227_RS09505 (K8227_09480) | 1940547..1941488 | - | 942 | WP_012775359.1 | 3'-5' exoribonuclease YhaM family protein | - |
| K8227_RS09510 (K8227_09485) | 1941478..1942716 | - | 1239 | WP_012027874.1 | DNA recombination protein RmuC | - |
| K8227_RS09515 (K8227_09490) | 1942717..1943349 | - | 633 | WP_012027875.1 | thiamine diphosphokinase | - |
| K8227_RS09520 (K8227_09495) | 1943342..1944001 | - | 660 | WP_012027876.1 | Ribulose-phosphate 3-epimerase | VF |
| K8227_RS09525 (K8227_09500) | 1944016..1944891 | - | 876 | WP_012027877.1 | ribosome small subunit-dependent GTPase A | - |
| K8227_RS09535 (K8227_09510) | 1945788..1947365 | - | 1578 | WP_012027878.1 | ABC transporter ATP-binding protein | - |
| K8227_RS09540 (K8227_09515) | 1947362..1948603 | - | 1242 | WP_014636518.1 | radical SAM protein | - |
| K8227_RS09545 (K8227_09520) | 1948972..1949835 | - | 864 | WP_223375655.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| K8227_RS09550 (K8227_09525) | 1950325..1952769 | - | 2445 | WP_012027881.1 | alkaline phosphatase family protein | - |
| K8227_RS09555 (K8227_09530) | 1952782..1954512 | - | 1731 | WP_012775361.1 | membrane protein | - |
| K8227_RS09560 (K8227_09535) | 1954877..1955749 | - | 873 | WP_012775362.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| K8227_RS09565 (K8227_09540) | 1955769..1956299 | - | 531 | WP_009910909.1 | DUF1697 domain-containing protein | - |
| K8227_RS09570 (K8227_09545) | 1956313..1956570 | - | 258 | WP_211838284.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| K8227_RS09575 (K8227_09550) | 1956572..1956832 | - | 261 | WP_002939010.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K8227_RS09580 (K8227_09555) | 1956908..1957363 | - | 456 | WP_012028534.1 | 8-oxo-dGTP diphosphatase | - |
| K8227_RS09585 (K8227_09560) | 1957370..1957699 | - | 330 | WP_012775364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K8227_RS09590 (K8227_09565) | 1957689..1957976 | - | 288 | WP_012028535.1 | hypothetical protein | Antitoxin Detail |
| K8227_RS09595 (K8227_09570) | 1958074..1958442 | - | 369 | WP_012775453.1 | hypothetical protein | - |
| K8227_RS09600 (K8227_09575) | 1958435..1959004 | - | 570 | WP_012775366.1 | ribonuclease M5 | - |
| K8227_RS09605 (K8227_09580) | 1958988..1959770 | - | 783 | WP_012028536.1 | TatD family hydrolase | - |
| K8227_RS09610 (K8227_09585) | 1959877..1960014 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
| K8227_RS09615 (K8227_09590) | 1960182..1961177 | - | 996 | WP_012775367.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| K8227_RS09620 (K8227_09595) | 1961197..1962009 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
| K8227_RS09625 (K8227_09600) | 1961993..1962352 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
| K8227_RS09630 (K8227_09605) | 1962423..1963817 | - | 1395 | WP_012027899.1 | argininosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus suis SC84 | Genomic island | TA6281, TA10159 | NC_012924 | 1874993..1918220 | 0 | |
| Streptococcus suis strain ZY05719 isolate diseased pig | Genomic island | TA46538, TA46539 | NZ_CP007497 | 1873994..1917221 | 0 |