MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 32040 bp
Accession: NZ_CP082830 Location: 1..32040 Organism: Escherichia coli strain SCAID WND2-2021 (3/145) Replicon: plasmid unnamed3
Accession: NZ_CP082830 Location: 1..32040 Organism: Escherichia coli strain SCAID WND2-2021 (3/145) Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8B73_RS26060 (K8B73_26060) | 280..900 | + | 621 | WP_000157549.1 | Type IV secretion system protein virB1 | VF |
| K8B73_RS26065 (K8B73_26065) | 914..1240 | + | 327 | WP_000008647.1 | Type IV secretion system protein virB2 | VF |
| K8B73_RS26070 (K8B73_26070) | 1259..4006 | + | 2748 | WP_016231857.1 | Type IV secretion system protein virB4 | VF |
| K8B73_RS26075 (K8B73_26075) | 4018..4734 | + | 717 | WP_000832283.1 | type IV secretion system protein | - |
| K8B73_RS26080 (K8B73_26080) | 4746..5840 | + | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| K8B73_RS26085 (K8B73_26085) | 6355..7041 | + | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| K8B73_RS26090 (K8B73_26090) | 7038..7946 | + | 909 | WP_001329500.1 | Type IV secretion system protein virB9 | VF |
| K8B73_RS26095 (K8B73_26095) | 7939..9057 | + | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| K8B73_RS26100 (K8B73_26100) | 9059..10087 | + | 1029 | WP_000017225.1 | Type IV secretion system protein VirB11 | VF |
| K8B73_RS26105 (K8B73_26105) | 10074..11936 | + | 1863 | WP_171729006.1 | relaxosome-coupling protein TaxB | - |
| K8B73_RS26110 (K8B73_26110) | 11945..12367 | + | 423 | WP_015059903.1 | cag pathogenicity island Cag12 family protein | - |
| K8B73_RS26115 (K8B73_26115) | 12351..12656 | + | 306 | WP_000147044.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| K8B73_RS26120 (K8B73_26120) | 12662..12916 | + | 255 | WP_000415096.1 | hypothetical protein | - |
| K8B73_RS26125 (K8B73_26125) | 13019..13327 | + | 309 | WP_000647576.1 | hypothetical protein | - |
| K8B73_RS26130 (K8B73_26130) | 13324..13818 | + | 495 | WP_223107169.1 | thermonuclease family protein | - |
| K8B73_RS26135 (K8B73_26135) | 13834..14238 | + | 405 | WP_021548625.1 | hypothetical protein | - |
| K8B73_RS26140 (K8B73_26140) | 14344..14919 | + | 576 | WP_124885145.1 | DNA topoisomerase III | - |
| K8B73_RS26145 (K8B73_26145) | 14924..17077 | + | 2154 | WP_052945331.1 | type IA DNA topoisomerase | - |
| K8B73_RS26150 (K8B73_26150) | 17074..17280 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| K8B73_RS26155 (K8B73_26155) | 17296..17760 | + | 465 | WP_223107166.1 | H-NS family nucleoid-associated regulatory protein | - |
| K8B73_RS26160 (K8B73_26160) | 17864..18520 | + | 657 | WP_000972912.1 | hypothetical protein | - |
| K8B73_RS26165 (K8B73_26165) | 18540..18851 | + | 312 | WP_223107167.1 | hypothetical protein | - |
| K8B73_RS26170 (K8B73_26170) | 19413..20237 | + | 825 | WP_154305090.1 | Tyrosine recombinase XerD | VF |
| K8B73_RS26175 (K8B73_26175) | 20342..21001 | + | 660 | WP_000516222.1 | hypothetical protein | VF |
| K8B73_RS26180 (K8B73_26180) | 21095..21397 | + | 303 | WP_001096507.1 | hypothetical protein | - |
| K8B73_RS26185 (K8B73_26185) | 21433..21684 | + | 252 | WP_000928750.1 | hypothetical protein | - |
| K8B73_RS26190 (K8B73_26190) | 22268..22711 | - | 444 | WP_223107168.1 | hypothetical protein | - |
| K8B73_RS26195 (K8B73_26195) | 22846..23250 | - | 405 | WP_012421203.1 | hypothetical protein | - |
| K8B73_RS26200 (K8B73_26200) | 23263..24129 | - | 867 | WP_001353743.1 | replication initiation protein | - |
| K8B73_RS26205 (K8B73_26205) | 25566..26081 | + | 516 | WP_001025395.1 | J domain-containing protein | - |
| K8B73_RS26210 (K8B73_26210) | 26186..26728 | + | 543 | WP_001083906.1 | hypothetical protein | - |
| K8B73_RS26215 (K8B73_26215) | 26725..26976 | + | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| K8B73_RS26220 (K8B73_26220) | 26963..27190 | + | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| K8B73_RS26225 (K8B73_26225) | 27646..27945 | + | 300 | WP_000650309.1 | hypothetical protein | - |
| K8B73_RS26230 (K8B73_26230) | 28036..28386 | + | 351 | WP_000854259.1 | hypothetical protein | - |
| K8B73_RS26235 (K8B73_26235) | 28691..28939 | + | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| K8B73_RS26240 (K8B73_26240) | 28936..29283 | + | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| K8B73_RS26245 (K8B73_26245) | 29644..30147 | + | 504 | WP_000781813.1 | relaxosome-coupling protein TaxA | - |
| K8B73_RS26250 (K8B73_26250) | 30151..31380 | + | 1230 | WP_001329504.1 | hypothetical protein | Relaxase |
| K8B73_RS26255 (K8B73_26255) | 31457..31750 | + | 294 | WP_000134733.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| K8B73_RS26260 (K8B73_26260) | 31747..31962 | + | 216 | WP_000760375.1 | EexN family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli strain JIE143 transconjugant Tx143 | Non-Mobilizable plasmid | TA10150, TA10151, TA20092 | JN194214 | 1..34345 | 0.005 |